RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 DEFB4AO15263 64 aa-0.56□□□□□ -2.5
SNHG1-210ENST00000539303 TOP2AP11388 1531 aaKnown RBP-0.56□□□□□ -2.5
SNHG1-210ENST00000539303 ATMQ13315 3056 aa-0.56□□□□□ -2.5
SNHG1-210ENST00000539303 MT1HL1P0DM35 61 aa-0.57□□□□□ -2.5
SNHG1-210ENST00000539303 TLN1Q9Y490 2541 aaKnown RBP-0.57□□□□□ -2.5
SNHG1-210ENST00000539303 WDFY3Q8IZQ1 3526 aa-0.58□□□□□ -2.5
SNHG1-210ENST00000539303 PRUNE2Q8WUY3 3088 aa-0.59□□□□□ -2.5
SNHG1-210ENST00000539303 MT2AP02795 61 aa-0.59□□□□□ -2.5
SNHG1-210ENST00000539303 DEFB136Q30KP8 78 aa-0.59□□□□□ -2.5
SNHG1-210ENST00000539303 MT1MQ8N339 61 aa-0.59□□□□□ -2.5
SNHG1-210ENST00000539303 CFAP54Q96N23 3096 aa-0.59□□□□□ -2.5
SNHG1-210ENST00000539303 ITPR2Q14571 2701 aa-0.61□□□□□ -2.51
SNHG1-210ENST00000539303 FREM2Q5SZK8 3169 aa-0.62□□□□□ -2.51
SNHG1-210ENST00000539303 LINC01590Q5TEZ4 76 aa-0.63□□□□□ -2.51
SNHG1-210ENST00000539303 RPL39LQ96EH5 51 aaKnown RBP-0.63□□□□□ -2.51
SNHG1-210ENST00000539303 PCNTO95613 3336 aa-0.64□□□□□ -2.51
SNHG1-210ENST00000539303 DUOX1Q9NRD9 1551 aa-0.64□□□□□ -2.51
SNHG1-210ENST00000539303 CEP350Q5VT06 3117 aa-0.64□□□□□ -2.51
SNHG1-210ENST00000539303 SZT2Q5T011 3432 aa-0.65□□□□□ -2.51
SNHG1-210ENST00000539303 FRYLO94915 3013 aa-0.65□□□□□ -2.51
SNHG1-210ENST00000539303 MT1BP07438 61 aa-0.65□□□□□ -2.51
SNHG1-210ENST00000539303 MROH2BQ7Z745 1585 aa-0.67□□□□□ -2.52
SNHG1-210ENST00000539303 XIRP2A4UGR9 3374 aa-0.68□□□□□ -2.52
SNHG1-210ENST00000539303 USP34Q70CQ2 3546 aa-0.68□□□□□ -2.52
SNHG1-210ENST00000539303 BOD1L1Q8NFC6 3051 aa-0.68□□□□□ -2.52
SNHG1-210ENST00000539303 WDFY4Q6ZS81 3184 aa-0.69□□□□□ -2.52
SNHG1-210ENST00000539303 SPEGQ15772 3267 aa-0.69□□□□□ -2.52
SNHG1-210ENST00000539303 DNAH14Q0VDD8 3507 aa-0.69□□□□□ -2.52
SNHG1-210ENST00000539303 MUC3AQ02505 3323 aa-0.69□□□□□ -2.52
SNHG1-210ENST00000539303 CEP250Q9BV73 2442 aa-0.71□□□□□ -2.52
SNHG1-210ENST00000539303 KRTAP20-1Q3LI63 56 aa-0.72□□□□□ -2.52
SNHG1-210ENST00000539303 DNAH12Q6ZR08 3092 aa-0.72□□□□□ -2.52
SNHG1-210ENST00000539303 RPS29P62273 56 aaKnown RBP-0.73□□□□□ -2.53
SNHG1-210ENST00000539303 RHPN1-AS1Q9BWJ2 59 aa-0.73□□□□□ -2.53
SNHG1-210ENST00000539303 ASPMQ8IZT6 3477 aa-0.73□□□□□ -2.53
SNHG1-210ENST00000539303 MKI67P46013 3256 aaKnown RBP-0.73□□□□□ -2.53
SNHG1-210ENST00000539303 MT1FP04733 61 aa-0.74□□□□□ -2.53
SNHG1-210ENST00000539303 SNRPGP62308 76 aaKnown RBP-0.75□□□□□ -2.53
SNHG1-210ENST00000539303 DCHS1Q96JQ0 3298 aa-0.76□□□□□ -2.53
SNHG1-210ENST00000539303 UNC80Q8N2C7 3258 aa-0.77□□□□□ -2.53
SNHG1-210ENST00000539303 A0A096LNI7 61 aa-0.77□□□□□ -2.53
SNHG1-210ENST00000539303 EP400Q96L91 3159 aa-0.78□□□□□ -2.53
SNHG1-210ENST00000539303 DEFB104AQ8WTQ1 72 aa-0.78□□□□□ -2.53
SNHG1-210ENST00000539303 GCC2Q8IWJ2 1684 aa-0.78□□□□□ -2.53
SNHG1-210ENST00000539303 KRTAP19-6Q3LI70 58 aa-0.79□□□□□ -2.54
SNHG1-210ENST00000539303 LOC400499M0QZD8 3231 aa-0.81□□□□□ -2.54
SNHG1-210ENST00000539303 CFAP47Q6ZTR5 3102 aa-0.81□□□□□ -2.54
SNHG1-210ENST00000539303 CENPEQ02224 2701 aa-0.81□□□□□ -2.54
SNHG1-210ENST00000539303 TTTY10Q9BZA0 68 aa-0.82□□□□□ -2.54
SNHG1-210ENST00000539303 HTN1P15515 57 aa-0.83□□□□□ -2.54
SNHG1-210ENST00000539303 DEFB133Q30KQ1 61 aa-0.83□□□□□ -2.54
SNHG1-210ENST00000539303 BRCA2P51587 3418 aa-0.84□□□□□ -2.54
SNHG1-210ENST00000539303 VCANP13611 3396 aa-0.88□□□□□ -2.55
SNHG1-210ENST00000539303 KRTAP19-2Q3LHN2 52 aa-0.89□□□□□ -2.55
SNHG1-210ENST00000539303 CENPFP49454 3210 aa-0.92□□□□□ -2.56
SNHG1-210ENST00000539303 DEFB124Q8NES8 71 aa-0.92□□□□□ -2.56
SNHG1-210ENST00000539303 ARHGAP5-AS1Q96IT6 56 aa-0.92□□□□□ -2.56
SNHG1-210ENST00000539303 CD52P31358 61 aa-0.94□□□□□ -2.56
SNHG1-210ENST00000539303 CDH23Q9H251 3354 aa-0.94□□□□□ -2.56
SNHG1-210ENST00000539303 K7EIM0 57 aa-0.95□□□□□ -2.56
SNHG1-210ENST00000539303 LINC01556Q5JQF7 62 aa-0.97□□□□□ -2.56
SNHG1-210ENST00000539303 PRCDQ00LT1 54 aa-0.98□□□□□ -2.57
SNHG1-210ENST00000539303 H3BUX3 64 aa-0.99□□□□□ -2.57
SNHG1-210ENST00000539303 VPS13AQ96RL7 3174 aa-0.99□□□□□ -2.57
SNHG1-210ENST00000539303 UTRNP46939 3433 aa-1□□□□□ -2.57
SNHG1-210ENST00000539303 A0A096LPF7 62 aa-1.02□□□□□ -2.57
SNHG1-210ENST00000539303 APELAP0DMC3 54 aa-1.02□□□□□ -2.57
SNHG1-210ENST00000539303 H3BSH0 61 aa-1.06□□□□□ -2.58
SNHG1-210ENST00000539303 RPL39P5Q59GN2 51 aa-1.12□□□□□ -2.59
SNHG1-210ENST00000539303 TMEM167AQ8TBQ9 72 aa-1.12□□□□□ -2.59
SNHG1-210ENST00000539303 DEFB108AA8MXU0 73 aa-1.14□□□□□ -2.59
SNHG1-210ENST00000539303 HTN3P15516 51 aa-1.15□□□□□ -2.59
SNHG1-210ENST00000539303 GOLGB1Q14789 3259 aaKnown RBP-1.16□□□□□ -2.6
SNHG1-210ENST00000539303 DEFB108BQ8NET1 73 aa-1.3□□□□□ -2.62
SNHG1-210ENST00000539303 Q9Y3F1 56 aa-1.33□□□□□ -2.62
SNHG1-210ENST00000539303 COX14Q96I36 57 aa-1.39□□□□□ -2.63
SNHG1-210ENST00000539303 STATHP02808 62 aa-1.43□□□□□ -2.64
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms