RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 SPINT4Q6UDR6 99 aa5.49□□□□□ -1.53
CCDC144NL-202ENST00000539177 A8MU10 97 aa5.47□□□□□ -1.53
CCDC144NL-202ENST00000539177 MT1EP04732 61 aa5.47□□□□□ -1.53
CCDC144NL-202ENST00000539177 KRTAP5-10Q6L8G5 202 aa5.45□□□□□ -1.54
CCDC144NL-202ENST00000539177 LCE4AQ5TA78 99 aa5.44□□□□□ -1.54
CCDC144NL-202ENST00000539177 CAMK2N1Q7Z7J9 78 aa5.44□□□□□ -1.54
CCDC144NL-202ENST00000539177 K7ERS5 55 aa5.43□□□□□ -1.54
CCDC144NL-202ENST00000539177 KRTAP12-1P59990 96 aa5.43□□□□□ -1.54
CCDC144NL-202ENST00000539177 CDC42SE1Q9NRR8 79 aa5.37□□□□□ -1.55
CCDC144NL-202ENST00000539177 MT1GP13640 62 aa5.31□□□□□ -1.56
CCDC144NL-202ENST00000539177 KRTAP4-6Q9BYQ5 205 aa5.3□□□□□ -1.56
CCDC144NL-202ENST00000539177 KRTAP5-7Q6L8G8 165 aa5.28□□□□□ -1.56
CCDC144NL-202ENST00000539177 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
CCDC144NL-202ENST00000539177 KRTAP19-5Q3LI72 72 aa5.25□□□□□ -1.57
CCDC144NL-202ENST00000539177 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
CCDC144NL-202ENST00000539177 MT1MQ8N339 61 aa5.25□□□□□ -1.57
CCDC144NL-202ENST00000539177 BRK1Q8WUW1 75 aa5.23□□□□□ -1.57
CCDC144NL-202ENST00000539177 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
CCDC144NL-202ENST00000539177 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
CCDC144NL-202ENST00000539177 SPRR5A0A1B0GTR4 108 aa5.16□□□□□ -1.58
CCDC144NL-202ENST00000539177 C10orf95Q9H7T3 257 aa5.16□□□□□ -1.58
CCDC144NL-202ENST00000539177 MT1LQ93083 61 aa5.15□□□□□ -1.59
CCDC144NL-202ENST00000539177 TNP1P09430 55 aa5.14□□□□□ -1.59
CCDC144NL-202ENST00000539177 ROMO1P60602 79 aa5.08□□□□□ -1.6
CCDC144NL-202ENST00000539177 KRTAP25-1Q3LHN0 102 aa5.06□□□□□ -1.6
CCDC144NL-202ENST00000539177 KRTAP20-2Q3LI61 65 aa5.02□□□□□ -1.61
CCDC144NL-202ENST00000539177 PRO0628Q9UI54 55 aa5□□□□□ -1.61
CCDC144NL-202ENST00000539177 PMAIP1Q13794 54 aa4.98□□□□□ -1.61
CCDC144NL-202ENST00000539177 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
CCDC144NL-202ENST00000539177 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
CCDC144NL-202ENST00000539177 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
CCDC144NL-202ENST00000539177 KRTAP12-4P60329 112 aa4.83□□□□□ -1.64
CCDC144NL-202ENST00000539177 KRTAP5-5Q701N2 237 aaPredicted RBP4.83□□□□□ -1.64
CCDC144NL-202ENST00000539177 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
CCDC144NL-202ENST00000539177 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
CCDC144NL-202ENST00000539177 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
CCDC144NL-202ENST00000539177 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
CCDC144NL-202ENST00000539177 AHNAKQ09666 5890 aaKnown RBP4.66□□□□□ -1.66
CCDC144NL-202ENST00000539177 KTN1-AS1Q86SY8 53 aa4.65□□□□□ -1.67
CCDC144NL-202ENST00000539177 MUC5ACP98088 5654 aa4.64□□□□□ -1.67
CCDC144NL-202ENST00000539177 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
CCDC144NL-202ENST00000539177 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
CCDC144NL-202ENST00000539177 MUC5BQ9HC84 5762 aaPredicted RBP4.59□□□□□ -1.68
CCDC144NL-202ENST00000539177 PRAC1Q96KF2 57 aa4.58□□□□□ -1.68
CCDC144NL-202ENST00000539177 KRTAP5-8O75690 187 aa4.57□□□□□ -1.68
CCDC144NL-202ENST00000539177 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
CCDC144NL-202ENST00000539177 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
CCDC144NL-202ENST00000539177 KRTAP6-1Q3LI64 71 aa4.4□□□□□ -1.71
CCDC144NL-202ENST00000539177 LCE3CQ5T5A8 94 aa4.4□□□□□ -1.71
CCDC144NL-202ENST00000539177 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.71
CCDC144NL-202ENST00000539177 MT1AP04731 61 aa4.36□□□□□ -1.71
CCDC144NL-202ENST00000539177 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
CCDC144NL-202ENST00000539177 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
CCDC144NL-202ENST00000539177 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
CCDC144NL-202ENST00000539177 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
CCDC144NL-202ENST00000539177 MT3P25713 68 aa4□□□□□ -1.77
CCDC144NL-202ENST00000539177 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
CCDC144NL-202ENST00000539177 H3BS24 57 aa3.95□□□□□ -1.78
CCDC144NL-202ENST00000539177 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
CCDC144NL-202ENST00000539177 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
CCDC144NL-202ENST00000539177 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
CCDC144NL-202ENST00000539177 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
CCDC144NL-202ENST00000539177 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
CCDC144NL-202ENST00000539177 KRTAP4-12Q9BQ66 201 aa3.53□□□□□ -1.84
CCDC144NL-202ENST00000539177 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
CCDC144NL-202ENST00000539177 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
CCDC144NL-202ENST00000539177 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
CCDC144NL-202ENST00000539177 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
CCDC144NL-202ENST00000539177 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
CCDC144NL-202ENST00000539177 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
CCDC144NL-202ENST00000539177 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
CCDC144NL-202ENST00000539177 INE1O15225 51 aa3□□□□□ -1.93
CCDC144NL-202ENST00000539177 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
CCDC144NL-202ENST00000539177 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
CCDC144NL-202ENST00000539177 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
CCDC144NL-202ENST00000539177 PRM1P04553 51 aa2.58□□□□□ -2
CCDC144NL-202ENST00000539177 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
CCDC144NL-202ENST00000539177 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 163 ms