RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-215ENST00000537551 PP632Q6XCG6 107 aa8.31□□□□□ -1.08
CHFR-215ENST00000537551 MT1LQ93083 61 aa8.28□□□□□ -1.08
CHFR-215ENST00000537551 PCP4P48539 62 aa8.24□□□□□ -1.09
CHFR-215ENST00000537551 A6NED7 52 aa8.21□□□□□ -1.1
CHFR-215ENST00000537551 MT1MQ8N339 61 aa8.2□□□□□ -1.1
CHFR-215ENST00000537551 DSTQ03001 7570 aaKnown RBP8.2□□□□□ -1.1
CHFR-215ENST00000537551 KRTAP25-1Q3LHN0 102 aa8.19□□□□□ -1.1
CHFR-215ENST00000537551 RPS28P62857 69 aaKnown RBP8.16□□□□□ -1.1
CHFR-215ENST00000537551 KRTAP12-3P60328 96 aa8.15□□□□□ -1.1
CHFR-215ENST00000537551 KRTAP4-3Q9BYR4 195 aa8.01□□□□□ -1.13
CHFR-215ENST00000537551 KRTAP4-9Q9BYQ8 210 aa7.95□□□□□ -1.14
CHFR-215ENST00000537551 CDC42SE1Q9NRR8 79 aa7.93□□□□□ -1.14
CHFR-215ENST00000537551 KRTAP4-7Q9BYR0 210 aa7.9□□□□□ -1.14
CHFR-215ENST00000537551 KRTAP23-1A1A580 65 aa7.87□□□□□ -1.15
CHFR-215ENST00000537551 LCE4AQ5TA78 99 aa7.82□□□□□ -1.16
CHFR-215ENST00000537551 ROMO1P60602 79 aa7.8□□□□□ -1.16
CHFR-215ENST00000537551 LCE1DQ5T752 114 aa7.76□□□□□ -1.17
CHFR-215ENST00000537551 MT4P47944 62 aa7.74□□□□□ -1.17
CHFR-215ENST00000537551 KRTAP19-4Q3LI73 84 aa7.68□□□□□ -1.18
CHFR-215ENST00000537551 KRTAP15-1Q3LI76 137 aa7.68□□□□□ -1.18
CHFR-215ENST00000537551 KRTAP5-4Q6L8H1 288 aa7.67□□□□□ -1.18
CHFR-215ENST00000537551 HMCN1Q96RW7 5635 aa7.52□□□□□ -1.21
CHFR-215ENST00000537551 LCE3CQ5T5A8 94 aa7.52□□□□□ -1.21
CHFR-215ENST00000537551 KRTAP4-6Q9BYQ5 205 aa7.51□□□□□ -1.21
CHFR-215ENST00000537551 LOC100996750A0A140TA64 210 aa7.47□□□□□ -1.21
CHFR-215ENST00000537551 KRTAP5-5Q701N2 237 aaPredicted RBP7.46□□□□□ -1.22
CHFR-215ENST00000537551 GPR98Q8WXG9 6306 aa7.4□□□□□ -1.22
CHFR-215ENST00000537551 KRTAP12-4P60329 112 aa7.3□□□□□ -1.24
CHFR-215ENST00000537551 KRTAP20-2Q3LI61 65 aa7.26□□□□□ -1.25
CHFR-215ENST00000537551 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
CHFR-215ENST00000537551 BRK1Q8WUW1 75 aa7.24□□□□□ -1.25
CHFR-215ENST00000537551 AHNAK2Q8IVF2 5795 aa7.18□□□□□ -1.26
CHFR-215ENST00000537551 SYNE1Q8NF91 8797 aaKnown RBP7.16□□□□□ -1.26
CHFR-215ENST00000537551 KRTAP5-10Q6L8G5 202 aa7.09□□□□□ -1.27
CHFR-215ENST00000537551 KRTAP9-6A8MVA2 160 aa7.05□□□□□ -1.28
CHFR-215ENST00000537551 MT1AP04731 61 aa7.05□□□□□ -1.28
CHFR-215ENST00000537551 KRTAP5-3Q6L8H2 238 aa7.01□□□□□ -1.29
CHFR-215ENST00000537551 KRTAP6-1Q3LI64 71 aa7□□□□□ -1.29
CHFR-215ENST00000537551 PMAIP1Q13794 54 aa6.82□□□□□ -1.32
CHFR-215ENST00000537551 KRTAP9-4Q9BYQ2 154 aa6.8□□□□□ -1.32
CHFR-215ENST00000537551 KRTAP5-7Q6L8G8 165 aa6.79□□□□□ -1.32
CHFR-215ENST00000537551 KRTAP5-2Q701N4 177 aa6.75□□□□□ -1.33
CHFR-215ENST00000537551 KRTAP6-2Q3LI66 62 aa6.66□□□□□ -1.34
CHFR-215ENST00000537551 KRTAP4-11Q9BYQ6 195 aa6.59□□□□□ -1.35
CHFR-215ENST00000537551 PRAC1Q96KF2 57 aa6.52□□□□□ -1.37
CHFR-215ENST00000537551 MT3P25713 68 aa6.46□□□□□ -1.38
CHFR-215ENST00000537551 PRO0628Q9UI54 55 aa6.39□□□□□ -1.39
CHFR-215ENST00000537551 KRTAP5-8O75690 187 aa6.34□□□□□ -1.39
CHFR-215ENST00000537551 OBSCNQ5VST9 7968 aa6.24□□□□□ -1.41
CHFR-215ENST00000537551 KTN1-AS1Q86SY8 53 aa6.09□□□□□ -1.43
CHFR-215ENST00000537551 KRTAP5-1Q6L8H4 278 aa6.03□□□□□ -1.44
CHFR-215ENST00000537551 KRTAP9-9Q9BYP9 154 aa6.03□□□□□ -1.44
CHFR-215ENST00000537551 SVIPQ8NHG7 77 aa5.89□□□□□ -1.47
CHFR-215ENST00000537551 MUC5BQ9HC84 5762 aaPredicted RBP5.86□□□□□ -1.47
CHFR-215ENST00000537551 MUC5ACP98088 5654 aa5.85□□□□□ -1.47
CHFR-215ENST00000537551 LCE1EQ5T753 118 aa5.85□□□□□ -1.47
CHFR-215ENST00000537551 AHNAKQ09666 5890 aaKnown RBP5.81□□□□□ -1.48
CHFR-215ENST00000537551 LCE1BQ5T7P3 118 aa5.56□□□□□ -1.52
CHFR-215ENST00000537551 LUZP6Q538Z0 58 aa5.53□□□□□ -1.52
CHFR-215ENST00000537551 KRTAP4-2Q9BYR5 136 aa5.5□□□□□ -1.53
CHFR-215ENST00000537551 LCE3DQ9BYE3 92 aa5.47□□□□□ -1.53
CHFR-215ENST00000537551 LCE1CQ5T751 118 aa5.43□□□□□ -1.54
CHFR-215ENST00000537551 LCE3EQ5T5B0 92 aa5.18□□□□□ -1.58
CHFR-215ENST00000537551 KRTAP4-12Q9BQ66 201 aa4.97□□□□□ -1.61
CHFR-215ENST00000537551 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.94□□□□□ -1.62
CHFR-215ENST00000537551 KRTAP5-11Q6L8G4 156 aa4.89□□□□□ -1.63
CHFR-215ENST00000537551 LCE1FQ5T754 118 aa4.73□□□□□ -1.65
CHFR-215ENST00000537551 KRTAP21-2Q3LI59 83 aa4.59□□□□□ -1.67
CHFR-215ENST00000537551 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
CHFR-215ENST00000537551 PHGR1C9JFL3 82 aa4.22□□□□□ -1.73
CHFR-215ENST00000537551 KRTAP4-4Q9BYR3 166 aa4.22□□□□□ -1.73
CHFR-215ENST00000537551 PRM1P04553 51 aa4□□□□□ -1.77
CHFR-215ENST00000537551 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
CHFR-215ENST00000537551 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
CHFR-215ENST00000537551 INE1O15225 51 aa3.65□□□□□ -1.83
CHFR-215ENST00000537551 KRTAP21-1Q3LI58 79 aa3.14□□□□□ -1.91
CHFR-215ENST00000537551 MUC16Q8WXI7 14507 aa2.81□□□□□ -1.96
CHFR-215ENST00000537551 H3BS24 57 aa2.21□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 133.2 ms