RNA–Protein interactions for RNA: ENST00000537323.5

PABPC1L-217, Transcript of poly(A) binding protein cytoplasmic 1 like, humanhuman

TSL 1 (best) BASIC

Gene PABPC1L, Length 1,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1L-217ENST00000537323 KRTAP19-3Q7Z4W3 81 aa5.89□□□□□ -1.47
PABPC1L-217ENST00000537323 MT1GP13640 62 aa5.89□□□□□ -1.47
PABPC1L-217ENST00000537323 MT1MQ8N339 61 aa5.87□□□□□ -1.47
PABPC1L-217ENST00000537323 KRTAP4-3Q9BYR4 195 aa5.82□□□□□ -1.48
PABPC1L-217ENST00000537323 FSIP2Q5CZC0 6907 aa5.81□□□□□ -1.48
PABPC1L-217ENST00000537323 FCGBPQ9Y6R7 5405 aaPredicted RBP5.8□□□□□ -1.48
PABPC1L-217ENST00000537323 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
PABPC1L-217ENST00000537323 LCE5AQ5TCM9 118 aa5.7□□□□□ -1.5
PABPC1L-217ENST00000537323 SPRR2FQ96RM1 72 aa5.68□□□□□ -1.5
PABPC1L-217ENST00000537323 MUC12Q9UKN1 5478 aa5.66□□□□□ -1.5
PABPC1L-217ENST00000537323 CRCT1Q9UGL9 99 aa5.59□□□□□ -1.51
PABPC1L-217ENST00000537323 MACF1Q9UPN3 7388 aaKnown RBP5.41□□□□□ -1.54
PABPC1L-217ENST00000537323 KRTAP9-2Q9BYQ4 174 aa5.38□□□□□ -1.55
PABPC1L-217ENST00000537323 KRTAP5-9P26371 169 aa5.36□□□□□ -1.55
PABPC1L-217ENST00000537323 LCE1AQ5T7P2 110 aa5.33□□□□□ -1.56
PABPC1L-217ENST00000537323 LCE3BQ5TA77 95 aa5.31□□□□□ -1.56
PABPC1L-217ENST00000537323 MT1AP04731 61 aa5.29□□□□□ -1.56
PABPC1L-217ENST00000537323 KRTAP12-4P60329 112 aa5.29□□□□□ -1.56
PABPC1L-217ENST00000537323 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
PABPC1L-217ENST00000537323 DSTQ03001 7570 aaKnown RBP5.25□□□□□ -1.57
PABPC1L-217ENST00000537323 SPRR2EP22531 72 aa5.23□□□□□ -1.57
PABPC1L-217ENST00000537323 SPRR2BP35325 72 aa5.23□□□□□ -1.57
PABPC1L-217ENST00000537323 SPRR2AP35326 72 aa5.23□□□□□ -1.57
PABPC1L-217ENST00000537323 KRTAP5-5Q701N2 237 aaPredicted RBP5.2□□□□□ -1.58
PABPC1L-217ENST00000537323 SYNE2Q8WXH0 6885 aaKnown RBP5.18□□□□□ -1.58
PABPC1L-217ENST00000537323 MDN1Q9NU22 5596 aa5.15□□□□□ -1.58
PABPC1L-217ENST00000537323 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
PABPC1L-217ENST00000537323 LCE3DQ9BYE3 92 aa5.03□□□□□ -1.6
PABPC1L-217ENST00000537323 SPRR2DP22532 72 aa5.01□□□□□ -1.61
PABPC1L-217ENST00000537323 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
PABPC1L-217ENST00000537323 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
PABPC1L-217ENST00000537323 KRTAP6-3Q3LI67 103 aa4.97□□□□□ -1.61
PABPC1L-217ENST00000537323 LCE3EQ5T5B0 92 aa4.97□□□□□ -1.61
PABPC1L-217ENST00000537323 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
PABPC1L-217ENST00000537323 KRTAP9-6A0A140TA67 174 aa4.79□□□□□ -1.64
PABPC1L-217ENST00000537323 MT3P25713 68 aa4.76□□□□□ -1.65
PABPC1L-217ENST00000537323 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
PABPC1L-217ENST00000537323 KRTAP9-7A8MTY7 169 aa4.7□□□□□ -1.66
PABPC1L-217ENST00000537323 KRTAP2-2Q9BYT5 123 aa4.67□□□□□ -1.66
PABPC1L-217ENST00000537323 PRM1P04553 51 aa4.66□□□□□ -1.66
PABPC1L-217ENST00000537323 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
PABPC1L-217ENST00000537323 NEBP20929 6669 aa4.51□□□□□ -1.69
PABPC1L-217ENST00000537323 LCE4AQ5TA78 99 aa4.42□□□□□ -1.7
PABPC1L-217ENST00000537323 KRTAP4-6Q9BYQ5 205 aa4.38□□□□□ -1.71
PABPC1L-217ENST00000537323 MT4P47944 62 aa4.35□□□□□ -1.71
PABPC1L-217ENST00000537323 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
PABPC1L-217ENST00000537323 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
PABPC1L-217ENST00000537323 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
PABPC1L-217ENST00000537323 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
PABPC1L-217ENST00000537323 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
PABPC1L-217ENST00000537323 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
PABPC1L-217ENST00000537323 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.76
PABPC1L-217ENST00000537323 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
PABPC1L-217ENST00000537323 MUC5ACP98088 5654 aa3.9□□□□□ -1.79
PABPC1L-217ENST00000537323 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
PABPC1L-217ENST00000537323 KRTAP5-10Q6L8G5 202 aa3.72□□□□□ -1.81
PABPC1L-217ENST00000537323 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
PABPC1L-217ENST00000537323 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
PABPC1L-217ENST00000537323 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
PABPC1L-217ENST00000537323 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.83
PABPC1L-217ENST00000537323 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
PABPC1L-217ENST00000537323 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
PABPC1L-217ENST00000537323 KRTAP5-7Q6L8G8 165 aa3.44□□□□□ -1.86
PABPC1L-217ENST00000537323 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
PABPC1L-217ENST00000537323 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
PABPC1L-217ENST00000537323 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.88
PABPC1L-217ENST00000537323 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
PABPC1L-217ENST00000537323 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
PABPC1L-217ENST00000537323 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
PABPC1L-217ENST00000537323 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
PABPC1L-217ENST00000537323 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
PABPC1L-217ENST00000537323 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
PABPC1L-217ENST00000537323 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
PABPC1L-217ENST00000537323 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
PABPC1L-217ENST00000537323 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
PABPC1L-217ENST00000537323 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
PABPC1L-217ENST00000537323 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 120.7 ms