RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 COX8AP10176 69 aa0.48□□□□□ -2.33
PRKDC-208ENST00000536710 KRTDAPP60985 99 aa0.48□□□□□ -2.33
PRKDC-208ENST00000536710 KRTAP20-1Q3LI63 56 aa0.48□□□□□ -2.33
PRKDC-208ENST00000536710 HIGD1BQ9P298 99 aa0.48□□□□□ -2.33
PRKDC-208ENST00000536710 MMP24-AS1A0A0U1RRL7 71 aa0.47□□□□□ -2.33
PRKDC-208ENST00000536710 WFDC13Q8IUB5 93 aa0.47□□□□□ -2.33
PRKDC-208ENST00000536710 C12orf57Q99622 126 aa0.47□□□□□ -2.33
PRKDC-208ENST00000536710 SNHG12Q9BXW3 62 aa0.47□□□□□ -2.33
PRKDC-208ENST00000536710 LINC00846Q9NV44 126 aa0.47□□□□□ -2.33
PRKDC-208ENST00000536710 SERP1Q9Y6X1 66 aa0.47□□□□□ -2.33
PRKDC-208ENST00000536710 DSTQ03001 7570 aaKnown RBP0.47□□□□□ -2.33
PRKDC-208ENST00000536710 MT1XP80297 61 aa0.46□□□□□ -2.34
PRKDC-208ENST00000536710 H1FX-AS1Q4G0G2 97 aa0.46□□□□□ -2.34
PRKDC-208ENST00000536710 Q5VV11 94 aa0.46□□□□□ -2.34
PRKDC-208ENST00000536710 C14orf144Q96I85 54 aa0.46□□□□□ -2.34
PRKDC-208ENST00000536710 PRO1854Q9UHT4 67 aa0.46□□□□□ -2.34
PRKDC-208ENST00000536710 A0A087WVE0 104 aa0.45□□□□□ -2.34
PRKDC-208ENST00000536710 H0YAA0 97 aa0.45□□□□□ -2.34
PRKDC-208ENST00000536710 K7EQZ3 153 aa0.45□□□□□ -2.34
PRKDC-208ENST00000536710 SPRR2EP22531 72 aa0.45□□□□□ -2.34
PRKDC-208ENST00000536710 SPRR2BP35325 72 aa0.45□□□□□ -2.34
PRKDC-208ENST00000536710 SPRR2AP35326 72 aa0.45□□□□□ -2.34
PRKDC-208ENST00000536710 HSD52Q0P140 79 aa0.45□□□□□ -2.34
PRKDC-208ENST00000536710 PYY3Q5JQD4 70 aa0.45□□□□□ -2.34
PRKDC-208ENST00000536710 SPRR2FQ96RM1 72 aa0.45□□□□□ -2.34
PRKDC-208ENST00000536710 MRPL34Q9BQ48 92 aaKnown RBP0.45□□□□□ -2.34
PRKDC-208ENST00000536710 VAMP8Q9BV40 100 aa0.44□□□□□ -2.34
PRKDC-208ENST00000536710 CRIPTQ9P021 101 aa0.44□□□□□ -2.34
PRKDC-208ENST00000536710 NDUFB1O75438 58 aa0.43□□□□□ -2.34
PRKDC-208ENST00000536710 COX6CP09669 75 aa0.43□□□□□ -2.34
PRKDC-208ENST00000536710 SPRR2DP22532 72 aa0.43□□□□□ -2.34
PRKDC-208ENST00000536710 S100A1P23297 94 aa0.43□□□□□ -2.34
PRKDC-208ENST00000536710 KRTAP19-7Q3SYF9 63 aa0.43□□□□□ -2.34
PRKDC-208ENST00000536710 KRTAP8-1Q8IUC2 63 aa0.43□□□□□ -2.34
PRKDC-208ENST00000536710 S4R3F8 94 aa0.43□□□□□ -2.34
PRKDC-208ENST00000536710 MUC5ACP98088 5654 aa0.43□□□□□ -2.34
PRKDC-208ENST00000536710 ATXN8Q156A1 80 aa0.42□□□□□ -2.34
PRKDC-208ENST00000536710 NREPQ16612 68 aa0.42□□□□□ -2.34
PRKDC-208ENST00000536710 CYP4F30PQ9H0H9 118 aa0.42□□□□□ -2.34
PRKDC-208ENST00000536710 UQCR10Q9UDW1 63 aa0.42□□□□□ -2.34
PRKDC-208ENST00000536710 MT1EP04732 61 aa0.41□□□□□ -2.34
PRKDC-208ENST00000536710 TP53AIP1Q9HCN2 124 aa0.41□□□□□ -2.34
PRKDC-208ENST00000536710 TRAV22A0A0B4J277 110 aa0.4□□□□□ -2.35
PRKDC-208ENST00000536710 M0R143 59 aa0.4□□□□□ -2.35
PRKDC-208ENST00000536710 SYNE1Q8NF91 8797 aaKnown RBP0.4□□□□□ -2.35
PRKDC-208ENST00000536710 K7EP34 96 aa0.39□□□□□ -2.35
PRKDC-208ENST00000536710 NDUFC1O43677 76 aa0.39□□□□□ -2.35
PRKDC-208ENST00000536710 MT1GP13640 62 aa0.39□□□□□ -2.35
PRKDC-208ENST00000536710 MT1MQ8N339 61 aa0.39□□□□□ -2.35
PRKDC-208ENST00000536710 MT1LQ93083 61 aa0.39□□□□□ -2.35
PRKDC-208ENST00000536710 UBL5Q9BZL1 73 aa0.39□□□□□ -2.35
PRKDC-208ENST00000536710 SPCS1Q9Y6A9 102 aa0.39□□□□□ -2.35
PRKDC-208ENST00000536710 H0Y9P7 68 aa0.38□□□□□ -2.35
PRKDC-208ENST00000536710 M0QZ58 72 aa0.38□□□□□ -2.35
PRKDC-208ENST00000536710 ATOX1O00244 68 aa0.38□□□□□ -2.35
PRKDC-208ENST00000536710 KRTAP20-2Q3LI61 65 aa0.38□□□□□ -2.35
PRKDC-208ENST00000536710 KRTAP19-5Q3LI72 72 aa0.38□□□□□ -2.35
PRKDC-208ENST00000536710 ETDBQ3ZM63 59 aa0.38□□□□□ -2.35
PRKDC-208ENST00000536710 ACYP1P07311 99 aa0.37□□□□□ -2.35
PRKDC-208ENST00000536710 MT4P47944 62 aa0.37□□□□□ -2.35
PRKDC-208ENST00000536710 ATP5EP2Q5VTU8 51 aa0.37□□□□□ -2.35
PRKDC-208ENST00000536710 COL5A1-AS1Q5SY13 56 aa0.36□□□□□ -2.35
PRKDC-208ENST00000536710 LINC00643Q86TS7 51 aa0.35□□□□□ -2.35
PRKDC-208ENST00000536710 MT-ATP8P03928 68 aa0.34□□□□□ -2.36
PRKDC-208ENST00000536710 GTF2H5Q6ZYL4 71 aa0.34□□□□□ -2.36
PRKDC-208ENST00000536710 KRTAP6-1Q3LI64 71 aa0.33□□□□□ -2.36
PRKDC-208ENST00000536710 MT1AP04731 61 aa0.32□□□□□ -2.36
PRKDC-208ENST00000536710 A0A1B0GV90 55 aa0.31□□□□□ -2.36
PRKDC-208ENST00000536710 TNP1P09430 55 aa0.31□□□□□ -2.36
PRKDC-208ENST00000536710 KRTAP6-2Q3LI66 62 aa0.31□□□□□ -2.36
PRKDC-208ENST00000536710 CHKB-CPT1BH3BT56 60 aa0.3□□□□□ -2.36
PRKDC-208ENST00000536710 H7BZZ5 65 aa0.3□□□□□ -2.36
PRKDC-208ENST00000536710 SERP2Q8N6R1 65 aa0.3□□□□□ -2.36
PRKDC-208ENST00000536710 A0A1B0GU69 56 aa0.28□□□□□ -2.36
PRKDC-208ENST00000536710 LINC01558Q9Y6Z2 57 aa0.28□□□□□ -2.36
PRKDC-208ENST00000536710 UQCR11O14957 56 aa0.25□□□□□ -2.37
PRKDC-208ENST00000536710 ATP5EP56381 51 aaPredicted RBP0.25□□□□□ -2.37
PRKDC-208ENST00000536710 PRM1P04553 51 aa0.11□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 6.7 ms