RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 KRTAP9-6A0A140TA67 174 aa4.73□□□□□ -1.65
CDH20-202ENST00000536675 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
CDH20-202ENST00000536675 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.65
CDH20-202ENST00000536675 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.65
CDH20-202ENST00000536675 SSPOA2VEC9 5147 aa4.71□□□□□ -1.66
CDH20-202ENST00000536675 KRTAP4-3Q9BYR4 195 aa4.67□□□□□ -1.66
CDH20-202ENST00000536675 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.66
CDH20-202ENST00000536675 MT1GP13640 62 aa4.63□□□□□ -1.67
CDH20-202ENST00000536675 KRTAP12-4P60329 112 aa4.59□□□□□ -1.67
CDH20-202ENST00000536675 CRCT1Q9UGL9 99 aa4.53□□□□□ -1.68
CDH20-202ENST00000536675 MT1MQ8N339 61 aa4.52□□□□□ -1.69
CDH20-202ENST00000536675 MUC12Q9UKN1 5478 aa4.51□□□□□ -1.69
CDH20-202ENST00000536675 FCGBPQ9Y6R7 5405 aaPredicted RBP4.51□□□□□ -1.69
CDH20-202ENST00000536675 LCE5AQ5TCM9 118 aa4.51□□□□□ -1.69
CDH20-202ENST00000536675 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
CDH20-202ENST00000536675 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
CDH20-202ENST00000536675 KRTAP4-12Q9BQ66 201 aa4.43□□□□□ -1.7
CDH20-202ENST00000536675 KRTAP9-2Q9BYQ4 174 aa4.39□□□□□ -1.71
CDH20-202ENST00000536675 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
CDH20-202ENST00000536675 LCE3BQ5TA77 95 aa4.35□□□□□ -1.71
CDH20-202ENST00000536675 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.72
CDH20-202ENST00000536675 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
CDH20-202ENST00000536675 MACF1Q9UPN3 7388 aaKnown RBP4.27□□□□□ -1.73
CDH20-202ENST00000536675 MT1AP04731 61 aa4.25□□□□□ -1.73
CDH20-202ENST00000536675 SYNE2Q8WXH0 6885 aaKnown RBP4.23□□□□□ -1.73
CDH20-202ENST00000536675 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
CDH20-202ENST00000536675 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
CDH20-202ENST00000536675 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
CDH20-202ENST00000536675 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
CDH20-202ENST00000536675 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
CDH20-202ENST00000536675 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
CDH20-202ENST00000536675 LCE3EQ5T5B0 92 aa4.13□□□□□ -1.75
CDH20-202ENST00000536675 PRM1P04553 51 aa4.1□□□□□ -1.75
CDH20-202ENST00000536675 LCE1AQ5T7P2 110 aa4.04□□□□□ -1.76
CDH20-202ENST00000536675 MDN1Q9NU22 5596 aa4.01□□□□□ -1.77
CDH20-202ENST00000536675 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
CDH20-202ENST00000536675 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
CDH20-202ENST00000536675 LCE1FQ5T754 118 aa3.84□□□□□ -1.8
CDH20-202ENST00000536675 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
CDH20-202ENST00000536675 MT3P25713 68 aa3.77□□□□□ -1.81
CDH20-202ENST00000536675 KRTAP5-9P26371 169 aa3.73□□□□□ -1.81
CDH20-202ENST00000536675 KRTAP6-3Q3LI67 103 aa3.72□□□□□ -1.81
CDH20-202ENST00000536675 SPRR2EP22531 72 aa3.71□□□□□ -1.82
CDH20-202ENST00000536675 SPRR2BP35325 72 aa3.71□□□□□ -1.82
CDH20-202ENST00000536675 SPRR2AP35326 72 aa3.71□□□□□ -1.82
CDH20-202ENST00000536675 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
CDH20-202ENST00000536675 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
CDH20-202ENST00000536675 NEBP20929 6669 aa3.63□□□□□ -1.83
CDH20-202ENST00000536675 SPRR2DP22532 72 aa3.56□□□□□ -1.84
CDH20-202ENST00000536675 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
CDH20-202ENST00000536675 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
CDH20-202ENST00000536675 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
CDH20-202ENST00000536675 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
CDH20-202ENST00000536675 MUC5ACP98088 5654 aa3.2□□□□□ -1.9
CDH20-202ENST00000536675 MT4P47944 62 aa3.2□□□□□ -1.9
CDH20-202ENST00000536675 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
CDH20-202ENST00000536675 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
CDH20-202ENST00000536675 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
CDH20-202ENST00000536675 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
CDH20-202ENST00000536675 KRTAP5-3Q6L8H2 238 aa2.95□□□□□ -1.94
CDH20-202ENST00000536675 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
CDH20-202ENST00000536675 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
CDH20-202ENST00000536675 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
CDH20-202ENST00000536675 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
CDH20-202ENST00000536675 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
CDH20-202ENST00000536675 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
CDH20-202ENST00000536675 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
CDH20-202ENST00000536675 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
CDH20-202ENST00000536675 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
CDH20-202ENST00000536675 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
CDH20-202ENST00000536675 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
CDH20-202ENST00000536675 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
CDH20-202ENST00000536675 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
CDH20-202ENST00000536675 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
CDH20-202ENST00000536675 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
CDH20-202ENST00000536675 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
CDH20-202ENST00000536675 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 163.4 ms