RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
TNFRSF1A-207ENST00000535958 SERP2Q8N6R1 65 aa4.43□□□□□ -1.7
TNFRSF1A-207ENST00000535958 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
TNFRSF1A-207ENST00000535958 A0A1B0GU69 56 aa4.35□□□□□ -1.71
TNFRSF1A-207ENST00000535958 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.71
TNFRSF1A-207ENST00000535958 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
TNFRSF1A-207ENST00000535958 A8MU10 97 aa4.33□□□□□ -1.72
TNFRSF1A-207ENST00000535958 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
TNFRSF1A-207ENST00000535958 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
TNFRSF1A-207ENST00000535958 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
TNFRSF1A-207ENST00000535958 H3BS24 57 aa4.28□□□□□ -1.72
TNFRSF1A-207ENST00000535958 KRTAP5-5Q701N2 237 aaPredicted RBP4.23□□□□□ -1.73
TNFRSF1A-207ENST00000535958 H7BZZ5 65 aa4.2□□□□□ -1.74
TNFRSF1A-207ENST00000535958 COX7CP15954 63 aa4.2□□□□□ -1.74
TNFRSF1A-207ENST00000535958 PRR15LQ9BU68 103 aa4.18□□□□□ -1.74
TNFRSF1A-207ENST00000535958 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
TNFRSF1A-207ENST00000535958 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.75
TNFRSF1A-207ENST00000535958 KRTAP25-1Q3LHN0 102 aa4.03□□□□□ -1.76
TNFRSF1A-207ENST00000535958 KRTAP19-4Q3LI73 84 aa4.03□□□□□ -1.76
TNFRSF1A-207ENST00000535958 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
TNFRSF1A-207ENST00000535958 RPS28P62857 69 aaKnown RBP4□□□□□ -1.77
TNFRSF1A-207ENST00000535958 UQCR11O14957 56 aa3.98□□□□□ -1.77
TNFRSF1A-207ENST00000535958 ANAPC13Q9BS18 74 aa3.98□□□□□ -1.77
TNFRSF1A-207ENST00000535958 V9GYY9 64 aa3.97□□□□□ -1.77
TNFRSF1A-207ENST00000535958 LINC01558Q9Y6Z2 57 aa3.96□□□□□ -1.78
TNFRSF1A-207ENST00000535958 ATP5EP56381 51 aaPredicted RBP3.94□□□□□ -1.78
TNFRSF1A-207ENST00000535958 K7ERS5 55 aa3.93□□□□□ -1.78
TNFRSF1A-207ENST00000535958 KRTAP5-2Q701N4 177 aa3.92□□□□□ -1.78
TNFRSF1A-207ENST00000535958 PRO0628Q9UI54 55 aa3.92□□□□□ -1.78
TNFRSF1A-207ENST00000535958 KRTAP15-1Q3LI76 137 aa3.91□□□□□ -1.78
TNFRSF1A-207ENST00000535958 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
TNFRSF1A-207ENST00000535958 MT1AP04731 61 aa3.9□□□□□ -1.79
TNFRSF1A-207ENST00000535958 CCDC179H3BU77 68 aa3.89□□□□□ -1.79
TNFRSF1A-207ENST00000535958 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
TNFRSF1A-207ENST00000535958 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
TNFRSF1A-207ENST00000535958 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
TNFRSF1A-207ENST00000535958 AHNAKQ09666 5890 aaKnown RBP3.87□□□□□ -1.79
TNFRSF1A-207ENST00000535958 MIR22HGQ0VDD5 57 aa3.86□□□□□ -1.79
TNFRSF1A-207ENST00000535958 MUC5BQ9HC84 5762 aaPredicted RBP3.85□□□□□ -1.79
TNFRSF1A-207ENST00000535958 KRTAP23-1A1A580 65 aa3.82□□□□□ -1.8
TNFRSF1A-207ENST00000535958 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
TNFRSF1A-207ENST00000535958 TMEM258P61165 79 aa3.78□□□□□ -1.8
TNFRSF1A-207ENST00000535958 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
TNFRSF1A-207ENST00000535958 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
TNFRSF1A-207ENST00000535958 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
TNFRSF1A-207ENST00000535958 PMAIP1Q13794 54 aa3.73□□□□□ -1.81
TNFRSF1A-207ENST00000535958 CDC42SE1Q9NRR8 79 aa3.64□□□□□ -1.83
TNFRSF1A-207ENST00000535958 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
TNFRSF1A-207ENST00000535958 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
TNFRSF1A-207ENST00000535958 PSPHP1O15172 72 aa3.61□□□□□ -1.83
TNFRSF1A-207ENST00000535958 MT3P25713 68 aa3.61□□□□□ -1.83
TNFRSF1A-207ENST00000535958 BRK1Q8WUW1 75 aa3.6□□□□□ -1.83
TNFRSF1A-207ENST00000535958 Q1T7F1 81 aa3.56□□□□□ -1.84
TNFRSF1A-207ENST00000535958 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
TNFRSF1A-207ENST00000535958 KTN1-AS1Q86SY8 53 aa3.53□□□□□ -1.84
TNFRSF1A-207ENST00000535958 A6NED7 52 aa3.52□□□□□ -1.85
TNFRSF1A-207ENST00000535958 ROMO1P60602 79 aa3.52□□□□□ -1.85
TNFRSF1A-207ENST00000535958 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
TNFRSF1A-207ENST00000535958 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
TNFRSF1A-207ENST00000535958 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
TNFRSF1A-207ENST00000535958 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
TNFRSF1A-207ENST00000535958 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
TNFRSF1A-207ENST00000535958 PRAC1Q96KF2 57 aa3.01□□□□□ -1.93
TNFRSF1A-207ENST00000535958 LUZP6Q538Z0 58 aa2.96□□□□□ -1.94
TNFRSF1A-207ENST00000535958 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
TNFRSF1A-207ENST00000535958 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.95
TNFRSF1A-207ENST00000535958 NDUFAF8A1L188 74 aa2.82□□□□□ -1.96
TNFRSF1A-207ENST00000535958 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
TNFRSF1A-207ENST00000535958 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
TNFRSF1A-207ENST00000535958 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
TNFRSF1A-207ENST00000535958 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
TNFRSF1A-207ENST00000535958 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
TNFRSF1A-207ENST00000535958 INE1O15225 51 aa2.52□□□□□ -2.01
TNFRSF1A-207ENST00000535958 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
TNFRSF1A-207ENST00000535958 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
TNFRSF1A-207ENST00000535958 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
TNFRSF1A-207ENST00000535958 PRM1P04553 51 aa1.77□□□□□ -2.13
TNFRSF1A-207ENST00000535958 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 27.5 ms