RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 DYNC1H1Q14204 4646 aaKnown RBP1.79□□□□□ -2.12
SNHG1-201ENST00000535076 LRP1BQ9NZR2 4599 aa1.78□□□□□ -2.12
SNHG1-201ENST00000535076 FAT3Q8TDW7 4589 aa1.78□□□□□ -2.13
SNHG1-201ENST00000535076 DNAH5Q8TE73 4624 aa1.77□□□□□ -2.13
SNHG1-201ENST00000535076 KIAA1109Q2LD37 5005 aa1.76□□□□□ -2.13
SNHG1-201ENST00000535076 SMR3BP02814 79 aaPredicted RBP1.76□□□□□ -2.13
SNHG1-201ENST00000535076 FAT1Q14517 4588 aa1.75□□□□□ -2.13
SNHG1-201ENST00000535076 BIRC6Q9NR09 4857 aa1.74□□□□□ -2.13
SNHG1-201ENST00000535076 HERC2O95714 4834 aa1.73□□□□□ -2.13
SNHG1-201ENST00000535076 TNXBP22105 4242 aa1.73□□□□□ -2.13
SNHG1-201ENST00000535076 RYR1P21817 5038 aa1.73□□□□□ -2.13
SNHG1-201ENST00000535076 HMCN1Q96RW7 5635 aa1.69□□□□□ -2.14
SNHG1-201ENST00000535076 ABCA13Q86UQ4 5058 aa1.68□□□□□ -2.14
SNHG1-201ENST00000535076 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
SNHG1-201ENST00000535076 SPRR2GQ9BYE4 73 aa1.67□□□□□ -2.14
SNHG1-201ENST00000535076 PCLOQ9Y6V0 5065 aa1.67□□□□□ -2.14
SNHG1-201ENST00000535076 HERC1Q15751 4861 aa1.65□□□□□ -2.15
SNHG1-201ENST00000535076 KRTAP19-5Q3LI72 72 aa1.65□□□□□ -2.15
SNHG1-201ENST00000535076 MT1HL1P0DM35 61 aa1.63□□□□□ -2.15
SNHG1-201ENST00000535076 LPAP08519 4548 aa1.63□□□□□ -2.15
SNHG1-201ENST00000535076 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
SNHG1-201ENST00000535076 MT1AP04731 61 aa1.57□□□□□ -2.16
SNHG1-201ENST00000535076 KRTAP19-2Q3LHN2 52 aa1.56□□□□□ -2.16
SNHG1-201ENST00000535076 LRP2P98164 4655 aa1.55□□□□□ -2.16
SNHG1-201ENST00000535076 PRM1P04553 51 aa1.55□□□□□ -2.16
SNHG1-201ENST00000535076 MUC17Q685J3 4493 aa1.54□□□□□ -2.16
SNHG1-201ENST00000535076 HMCN2Q8NDA2 5059 aa1.54□□□□□ -2.16
SNHG1-201ENST00000535076 UBR4Q5T4S7 5183 aa1.53□□□□□ -2.16
SNHG1-201ENST00000535076 KRTAP19-8Q3LI54 63 aa1.52□□□□□ -2.17
SNHG1-201ENST00000535076 RNF213Q63HN8 5207 aa1.49□□□□□ -2.17
SNHG1-201ENST00000535076 MUC2Q02817 5179 aa1.49□□□□□ -2.17
SNHG1-201ENST00000535076 MT1EP04732 61 aa1.49□□□□□ -2.17
SNHG1-201ENST00000535076 MT1XP80297 61 aa1.48□□□□□ -2.17
SNHG1-201ENST00000535076 KRTAP4-1Q9BYQ7 146 aa1.47□□□□□ -2.17
SNHG1-201ENST00000535076 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
SNHG1-201ENST00000535076 MT1LQ93083 61 aa1.44□□□□□ -2.18
SNHG1-201ENST00000535076 FAT4Q6V0I7 4981 aa1.4□□□□□ -2.19
SNHG1-201ENST00000535076 SPRR2AP35326 72 aa1.37□□□□□ -2.19
SNHG1-201ENST00000535076 MT1BP07438 61 aa1.36□□□□□ -2.19
SNHG1-201ENST00000535076 SPRR2BP35325 72 aa1.36□□□□□ -2.19
SNHG1-201ENST00000535076 MT1HP80294 61 aa1.36□□□□□ -2.19
SNHG1-201ENST00000535076 SPRR2FQ96RM1 72 aa1.36□□□□□ -2.19
SNHG1-201ENST00000535076 KRTAP6-2Q3LI66 62 aa1.35□□□□□ -2.19
SNHG1-201ENST00000535076 SPRR2DP22532 72 aa1.32□□□□□ -2.2
SNHG1-201ENST00000535076 KRTAP19-7Q3SYF9 63 aa1.32□□□□□ -2.2
SNHG1-201ENST00000535076 MT2AP02795 61 aa1.29□□□□□ -2.2
SNHG1-201ENST00000535076 SYNE1Q8NF91 8797 aaKnown RBP1.28□□□□□ -2.2
SNHG1-201ENST00000535076 MT1FP04733 61 aa1.28□□□□□ -2.2
SNHG1-201ENST00000535076 SPRR2EP22531 72 aa1.27□□□□□ -2.21
SNHG1-201ENST00000535076 CRCT1Q9UGL9 99 aa1.27□□□□□ -2.21
SNHG1-201ENST00000535076 USH2AO75445 5202 aa1.26□□□□□ -2.21
SNHG1-201ENST00000535076 FSIP2Q5CZC0 6907 aa1.24□□□□□ -2.21
SNHG1-201ENST00000535076 SSPOA2VEC9 5147 aa1.23□□□□□ -2.21
SNHG1-201ENST00000535076 FCGBPQ9Y6R7 5405 aaPredicted RBP1.22□□□□□ -2.21
SNHG1-201ENST00000535076 KRTAP19-3Q7Z4W3 81 aa1.21□□□□□ -2.22
SNHG1-201ENST00000535076 KRTAP19-6Q3LI70 58 aa1.2□□□□□ -2.22
SNHG1-201ENST00000535076 MT1GP13640 62 aa1.18□□□□□ -2.22
SNHG1-201ENST00000535076 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
SNHG1-201ENST00000535076 MT1MQ8N339 61 aa1.14□□□□□ -2.23
SNHG1-201ENST00000535076 KRTAP6-1Q3LI64 71 aa1.08□□□□□ -2.24
SNHG1-201ENST00000535076 SYNE2Q8WXH0 6885 aaKnown RBP1.08□□□□□ -2.24
SNHG1-201ENST00000535076 KMT2DO14686 5537 aa1.08□□□□□ -2.24
SNHG1-201ENST00000535076 MACF1Q9UPN3 7388 aaKnown RBP1.05□□□□□ -2.24
SNHG1-201ENST00000535076 MDN1Q9NU22 5596 aa1.04□□□□□ -2.24
SNHG1-201ENST00000535076 MUC12Q9UKN1 5478 aa1.02□□□□□ -2.25
SNHG1-201ENST00000535076 NEBP20929 6669 aa1.01□□□□□ -2.25
SNHG1-201ENST00000535076 KRTAP20-1Q3LI63 56 aa0.99□□□□□ -2.25
SNHG1-201ENST00000535076 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
SNHG1-201ENST00000535076 GPR98Q8WXG9 6306 aa0.91□□□□□ -2.26
SNHG1-201ENST00000535076 DSTQ03001 7570 aaKnown RBP0.88□□□□□ -2.27
SNHG1-201ENST00000535076 MT4P47944 62 aa0.85□□□□□ -2.27
SNHG1-201ENST00000535076 KRTAP20-2Q3LI61 65 aa0.82□□□□□ -2.28
SNHG1-201ENST00000535076 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
SNHG1-201ENST00000535076 MUC5ACP98088 5654 aa0.8□□□□□ -2.28
SNHG1-201ENST00000535076 AHNAKQ09666 5890 aaKnown RBP0.74□□□□□ -2.29
SNHG1-201ENST00000535076 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
SNHG1-201ENST00000535076 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
SNHG1-201ENST00000535076 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 34.4 ms