RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 FCGBPQ9Y6R7 5405 aaPredicted RBP3.49□□□□□ -1.85
SORL1-213ENST00000534754 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
SORL1-213ENST00000534754 KRTAP10-5P60370 271 aa3.46□□□□□ -1.86
SORL1-213ENST00000534754 KRTAP10-12P60413 245 aa3.44□□□□□ -1.86
SORL1-213ENST00000534754 MT1XP80297 61 aa3.44□□□□□ -1.86
SORL1-213ENST00000534754 MACF1Q9UPN3 7388 aaKnown RBP3.4□□□□□ -1.86
SORL1-213ENST00000534754 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
SORL1-213ENST00000534754 KRTAP10-7P60409 375 aaPredicted RBP3.35□□□□□ -1.87
SORL1-213ENST00000534754 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
SORL1-213ENST00000534754 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
SORL1-213ENST00000534754 KMT2DO14686 5537 aa3.26□□□□□ -1.89
SORL1-213ENST00000534754 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
SORL1-213ENST00000534754 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
SORL1-213ENST00000534754 KRTAP6-3Q3LI67 103 aa3.2□□□□□ -1.9
SORL1-213ENST00000534754 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
SORL1-213ENST00000534754 KRTAP9-6A8MVA2 160 aa3.15□□□□□ -1.9
SORL1-213ENST00000534754 KRTAP2-3P0C7H8 128 aa3.13□□□□□ -1.91
SORL1-213ENST00000534754 KRTAP2-4Q9BYR9 128 aa3.13□□□□□ -1.91
SORL1-213ENST00000534754 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
SORL1-213ENST00000534754 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
SORL1-213ENST00000534754 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.91
SORL1-213ENST00000534754 KRTAP19-4Q3LI73 84 aa3.09□□□□□ -1.91
SORL1-213ENST00000534754 LCE5AQ5TCM9 118 aa3.09□□□□□ -1.91
SORL1-213ENST00000534754 KRTAP19-7Q3SYF9 63 aa3.08□□□□□ -1.92
SORL1-213ENST00000534754 LCE4AQ5TA78 99 aa3.07□□□□□ -1.92
SORL1-213ENST00000534754 NEBP20929 6669 aa3.05□□□□□ -1.92
SORL1-213ENST00000534754 LCE1AQ5T7P2 110 aa3.03□□□□□ -1.92
SORL1-213ENST00000534754 MT1EP04732 61 aa3.03□□□□□ -1.93
SORL1-213ENST00000534754 MDN1Q9NU22 5596 aa3.02□□□□□ -1.93
SORL1-213ENST00000534754 SPRR2EP22531 72 aa3.02□□□□□ -1.93
SORL1-213ENST00000534754 SPRR2BP35325 72 aa3.02□□□□□ -1.93
SORL1-213ENST00000534754 SPRR2AP35326 72 aa3.02□□□□□ -1.93
SORL1-213ENST00000534754 MT1LQ93083 61 aa2.99□□□□□ -1.93
SORL1-213ENST00000534754 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
SORL1-213ENST00000534754 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
SORL1-213ENST00000534754 SPRR2DP22532 72 aa2.91□□□□□ -1.94
SORL1-213ENST00000534754 MT1GP13640 62 aa2.88□□□□□ -1.95
SORL1-213ENST00000534754 DSTQ03001 7570 aaKnown RBP2.87□□□□□ -1.95
SORL1-213ENST00000534754 MT1MQ8N339 61 aa2.87□□□□□ -1.95
SORL1-213ENST00000534754 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
SORL1-213ENST00000534754 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
SORL1-213ENST00000534754 KRTAP12-4P60329 112 aa2.81□□□□□ -1.96
SORL1-213ENST00000534754 KRTAP2-2Q9BYT5 123 aa2.75□□□□□ -1.97
SORL1-213ENST00000534754 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
SORL1-213ENST00000534754 MT1AP04731 61 aa2.62□□□□□ -1.99
SORL1-213ENST00000534754 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
SORL1-213ENST00000534754 KRTAP5-4Q6L8H1 288 aa2.6□□□□□ -1.99
SORL1-213ENST00000534754 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
SORL1-213ENST00000534754 MT4P47944 62 aa2.54□□□□□ -2
SORL1-213ENST00000534754 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
SORL1-213ENST00000534754 KRTAP6-1Q3LI64 71 aa2.53□□□□□ -2
SORL1-213ENST00000534754 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
SORL1-213ENST00000534754 PRM1P04553 51 aa2.52□□□□□ -2.01
SORL1-213ENST00000534754 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
SORL1-213ENST00000534754 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
SORL1-213ENST00000534754 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
SORL1-213ENST00000534754 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
SORL1-213ENST00000534754 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
SORL1-213ENST00000534754 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
SORL1-213ENST00000534754 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
SORL1-213ENST00000534754 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
SORL1-213ENST00000534754 MT3P25713 68 aa2.25□□□□□ -2.05
SORL1-213ENST00000534754 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
SORL1-213ENST00000534754 KRTAP5-1Q6L8H4 278 aa2.22□□□□□ -2.05
SORL1-213ENST00000534754 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
SORL1-213ENST00000534754 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
SORL1-213ENST00000534754 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
SORL1-213ENST00000534754 LCE1EQ5T753 118 aa2.05□□□□□ -2.08
SORL1-213ENST00000534754 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
SORL1-213ENST00000534754 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
SORL1-213ENST00000534754 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
SORL1-213ENST00000534754 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
SORL1-213ENST00000534754 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.11
SORL1-213ENST00000534754 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
SORL1-213ENST00000534754 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
SORL1-213ENST00000534754 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
SORL1-213ENST00000534754 MUC19Q7Z5P9 8384 aa1.43□□□□□ -2.18
SORL1-213ENST00000534754 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 104.3 ms