RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 Q1T7F1 81 aa5.7□□□□□ -1.5
PAX6-230ENST00000534390 MT1GP13640 62 aa5.69□□□□□ -1.5
PAX6-230ENST00000534390 PP632Q6XCG6 107 aa5.69□□□□□ -1.5
PAX6-230ENST00000534390 MT1LQ93083 61 aa5.66□□□□□ -1.5
PAX6-230ENST00000534390 MT1MQ8N339 61 aa5.62□□□□□ -1.51
PAX6-230ENST00000534390 A6NED7 52 aa5.6□□□□□ -1.51
PAX6-230ENST00000534390 DSTQ03001 7570 aaKnown RBP5.59□□□□□ -1.51
PAX6-230ENST00000534390 KRTAP12-3P60328 96 aa5.57□□□□□ -1.52
PAX6-230ENST00000534390 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
PAX6-230ENST00000534390 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
PAX6-230ENST00000534390 RPS28P62857 69 aaKnown RBP5.5□□□□□ -1.53
PAX6-230ENST00000534390 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
PAX6-230ENST00000534390 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
PAX6-230ENST00000534390 CDC42SE1Q9NRR8 79 aa5.4□□□□□ -1.54
PAX6-230ENST00000534390 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
PAX6-230ENST00000534390 MT4P47944 62 aa5.35□□□□□ -1.55
PAX6-230ENST00000534390 LCE1DQ5T752 114 aa5.35□□□□□ -1.55
PAX6-230ENST00000534390 PRO0628Q9UI54 55 aa5.33□□□□□ -1.56
PAX6-230ENST00000534390 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
PAX6-230ENST00000534390 ROMO1P60602 79 aa5.3□□□□□ -1.56
PAX6-230ENST00000534390 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
PAX6-230ENST00000534390 KRTAP5-4Q6L8H1 288 aa5.23□□□□□ -1.57
PAX6-230ENST00000534390 HMCN1Q96RW7 5635 aa5.22□□□□□ -1.57
PAX6-230ENST00000534390 GPR98Q8WXG9 6306 aa5.18□□□□□ -1.58
PAX6-230ENST00000534390 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
PAX6-230ENST00000534390 KRTAP4-6Q9BYQ5 205 aa5.16□□□□□ -1.58
PAX6-230ENST00000534390 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
PAX6-230ENST00000534390 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
PAX6-230ENST00000534390 KRTAP5-5Q701N2 237 aaPredicted RBP5.09□□□□□ -1.59
PAX6-230ENST00000534390 PMAIP1Q13794 54 aa5.03□□□□□ -1.6
PAX6-230ENST00000534390 AHNAK2Q8IVF2 5795 aa5.01□□□□□ -1.61
PAX6-230ENST00000534390 KRTAP12-4P60329 112 aa5□□□□□ -1.61
PAX6-230ENST00000534390 KRTAP20-2Q3LI61 65 aa4.98□□□□□ -1.61
PAX6-230ENST00000534390 SPRR5A0A1B0GTR4 108 aa4.94□□□□□ -1.62
PAX6-230ENST00000534390 BRK1Q8WUW1 75 aa4.93□□□□□ -1.62
PAX6-230ENST00000534390 KRTAP5-10Q6L8G5 202 aa4.87□□□□□ -1.63
PAX6-230ENST00000534390 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
PAX6-230ENST00000534390 MT1AP04731 61 aa4.81□□□□□ -1.64
PAX6-230ENST00000534390 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
PAX6-230ENST00000534390 SYNE1Q8NF91 8797 aaKnown RBP4.8□□□□□ -1.64
PAX6-230ENST00000534390 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
PAX6-230ENST00000534390 KTN1-AS1Q86SY8 53 aa4.79□□□□□ -1.64
PAX6-230ENST00000534390 H3BS24 57 aa4.75□□□□□ -1.65
PAX6-230ENST00000534390 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
PAX6-230ENST00000534390 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
PAX6-230ENST00000534390 KRTAP5-2Q701N4 177 aa4.6□□□□□ -1.67
PAX6-230ENST00000534390 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
PAX6-230ENST00000534390 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
PAX6-230ENST00000534390 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
PAX6-230ENST00000534390 MT3P25713 68 aa4.41□□□□□ -1.7
PAX6-230ENST00000534390 A0A0A0MQY5 61 aa4.4□□□□□ -1.71
PAX6-230ENST00000534390 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
PAX6-230ENST00000534390 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
PAX6-230ENST00000534390 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
PAX6-230ENST00000534390 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
PAX6-230ENST00000534390 AHNAKQ09666 5890 aaKnown RBP4.08□□□□□ -1.76
PAX6-230ENST00000534390 MUC5BQ9HC84 5762 aaPredicted RBP4.07□□□□□ -1.76
PAX6-230ENST00000534390 MUC5ACP98088 5654 aa4.07□□□□□ -1.76
PAX6-230ENST00000534390 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
PAX6-230ENST00000534390 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
PAX6-230ENST00000534390 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
PAX6-230ENST00000534390 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
PAX6-230ENST00000534390 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
PAX6-230ENST00000534390 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
PAX6-230ENST00000534390 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
PAX6-230ENST00000534390 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
PAX6-230ENST00000534390 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
PAX6-230ENST00000534390 INE1O15225 51 aa3.34□□□□□ -1.87
PAX6-230ENST00000534390 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
PAX6-230ENST00000534390 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
PAX6-230ENST00000534390 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
PAX6-230ENST00000534390 KRTAP21-2Q3LI59 83 aa3.12□□□□□ -1.91
PAX6-230ENST00000534390 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
PAX6-230ENST00000534390 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
PAX6-230ENST00000534390 PRM1P04553 51 aa2.73□□□□□ -1.97
PAX6-230ENST00000534390 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
PAX6-230ENST00000534390 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
PAX6-230ENST00000534390 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 109.8 ms