RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 M0QZ58 72 aa5.17□□□□□ -1.58
CAPRIN1-213ENST00000533562 A0A1B0GU33 70 aa5.16□□□□□ -1.58
CAPRIN1-213ENST00000533562 KRTAP2-3P0C7H8 128 aa5.14□□□□□ -1.59
CAPRIN1-213ENST00000533562 KRTAP2-4Q9BYR9 128 aa5.14□□□□□ -1.59
CAPRIN1-213ENST00000533562 KRTAP8-1Q8IUC2 63 aa5.13□□□□□ -1.59
CAPRIN1-213ENST00000533562 SPRR2EP22531 72 aa5.12□□□□□ -1.59
CAPRIN1-213ENST00000533562 SPRR2BP35325 72 aa5.12□□□□□ -1.59
CAPRIN1-213ENST00000533562 SPRR2AP35326 72 aa5.12□□□□□ -1.59
CAPRIN1-213ENST00000533562 KRTAP12-2P59991 146 aa5.12□□□□□ -1.59
CAPRIN1-213ENST00000533562 LCE1AQ5T7P2 110 aa5.03□□□□□ -1.6
CAPRIN1-213ENST00000533562 SPINT4Q6UDR6 99 aa5.03□□□□□ -1.6
CAPRIN1-213ENST00000533562 KRTAP2-2Q9BYT5 123 aa4.97□□□□□ -1.61
CAPRIN1-213ENST00000533562 KRTAP2-1Q9BYU5 128 aa4.97□□□□□ -1.61
CAPRIN1-213ENST00000533562 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.62
CAPRIN1-213ENST00000533562 SPRR2DP22532 72 aa4.95□□□□□ -1.62
CAPRIN1-213ENST00000533562 KRTAP10-12P60413 245 aa4.95□□□□□ -1.62
CAPRIN1-213ENST00000533562 NDUFAF8A1L188 74 aa4.88□□□□□ -1.63
CAPRIN1-213ENST00000533562 CAMK2N1Q7Z7J9 78 aa4.81□□□□□ -1.64
CAPRIN1-213ENST00000533562 KRTAP13-4Q3LI77 160 aa4.77□□□□□ -1.65
CAPRIN1-213ENST00000533562 LUZP6Q538Z0 58 aa4.74□□□□□ -1.65
CAPRIN1-213ENST00000533562 A0A0D9SG42 100 aa4.66□□□□□ -1.66
CAPRIN1-213ENST00000533562 KRTAP19-7Q3SYF9 63 aa4.65□□□□□ -1.67
CAPRIN1-213ENST00000533562 KRTAP5-3Q6L8H2 238 aa4.65□□□□□ -1.67
CAPRIN1-213ENST00000533562 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
CAPRIN1-213ENST00000533562 MT1EP04732 61 aa4.62□□□□□ -1.67
CAPRIN1-213ENST00000533562 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
CAPRIN1-213ENST00000533562 C10orf95Q9H7T3 257 aa4.62□□□□□ -1.67
CAPRIN1-213ENST00000533562 PP632Q6XCG6 107 aa4.59□□□□□ -1.67
CAPRIN1-213ENST00000533562 KRTAP12-1P59990 96 aa4.58□□□□□ -1.68
CAPRIN1-213ENST00000533562 MT1GP13640 62 aa4.52□□□□□ -1.69
CAPRIN1-213ENST00000533562 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
CAPRIN1-213ENST00000533562 MT3P25713 68 aa4.48□□□□□ -1.69
CAPRIN1-213ENST00000533562 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
CAPRIN1-213ENST00000533562 TNP1P09430 55 aa4.4□□□□□ -1.71
CAPRIN1-213ENST00000533562 MT1MQ8N339 61 aa4.4□□□□□ -1.71
CAPRIN1-213ENST00000533562 MT1LQ93083 61 aa4.4□□□□□ -1.71
CAPRIN1-213ENST00000533562 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
CAPRIN1-213ENST00000533562 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
CAPRIN1-213ENST00000533562 MT4P47944 62 aa4.34□□□□□ -1.71
CAPRIN1-213ENST00000533562 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
CAPRIN1-213ENST00000533562 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
CAPRIN1-213ENST00000533562 INE1O15225 51 aa4.25□□□□□ -1.73
CAPRIN1-213ENST00000533562 SPRR5A0A1B0GTR4 108 aa4.23□□□□□ -1.73
CAPRIN1-213ENST00000533562 KRTAP12-3P60328 96 aa4.22□□□□□ -1.73
CAPRIN1-213ENST00000533562 AHNAK2Q8IVF2 5795 aa4.18□□□□□ -1.74
CAPRIN1-213ENST00000533562 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
CAPRIN1-213ENST00000533562 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
CAPRIN1-213ENST00000533562 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
CAPRIN1-213ENST00000533562 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
CAPRIN1-213ENST00000533562 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
CAPRIN1-213ENST00000533562 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
CAPRIN1-213ENST00000533562 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
CAPRIN1-213ENST00000533562 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
CAPRIN1-213ENST00000533562 MT1AP04731 61 aa3.74□□□□□ -1.81
CAPRIN1-213ENST00000533562 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
CAPRIN1-213ENST00000533562 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
CAPRIN1-213ENST00000533562 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
CAPRIN1-213ENST00000533562 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
CAPRIN1-213ENST00000533562 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
CAPRIN1-213ENST00000533562 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
CAPRIN1-213ENST00000533562 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
CAPRIN1-213ENST00000533562 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
CAPRIN1-213ENST00000533562 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
CAPRIN1-213ENST00000533562 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
CAPRIN1-213ENST00000533562 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
CAPRIN1-213ENST00000533562 AHNAKQ09666 5890 aaKnown RBP3.46□□□□□ -1.85
CAPRIN1-213ENST00000533562 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
CAPRIN1-213ENST00000533562 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
CAPRIN1-213ENST00000533562 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
CAPRIN1-213ENST00000533562 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
CAPRIN1-213ENST00000533562 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
CAPRIN1-213ENST00000533562 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
CAPRIN1-213ENST00000533562 PRM1P04553 51 aa2.64□□□□□ -1.99
CAPRIN1-213ENST00000533562 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
CAPRIN1-213ENST00000533562 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
CAPRIN1-213ENST00000533562 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
CAPRIN1-213ENST00000533562 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
CAPRIN1-213ENST00000533562 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 135.1 ms