RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 SCGB1A1P11684 91 aa2.68□□□□□ -1.98
NXF1-215ENST00000533440 ACYP2P14621 99 aa2.67□□□□□ -1.98
NXF1-215ENST00000533440 SPTSSBQ8NFR3 76 aa2.67□□□□□ -1.98
NXF1-215ENST00000533440 J3QR89 54 aa2.65□□□□□ -1.99
NXF1-215ENST00000533440 KRTAP13-4Q3LI77 160 aa2.65□□□□□ -1.99
NXF1-215ENST00000533440 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
NXF1-215ENST00000533440 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
NXF1-215ENST00000533440 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
NXF1-215ENST00000533440 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
NXF1-215ENST00000533440 SMIM20Q8N5G0 67 aa2.62□□□□□ -1.99
NXF1-215ENST00000533440 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
NXF1-215ENST00000533440 CHKB-CPT1BH3BT56 60 aa2.6□□□□□ -1.99
NXF1-215ENST00000533440 KRTAP12-4P60329 112 aa2.6□□□□□ -1.99
NXF1-215ENST00000533440 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
NXF1-215ENST00000533440 C10orf95Q9H7T3 257 aa2.57□□□□□ -2
NXF1-215ENST00000533440 K7ERU9 68 aa2.56□□□□□ -2
NXF1-215ENST00000533440 PRO0628Q9UI54 55 aa2.55□□□□□ -2
NXF1-215ENST00000533440 LCE1FQ5T754 118 aa2.54□□□□□ -2
NXF1-215ENST00000533440 SPANXA2-OT1Q8N9U9 137 aa2.54□□□□□ -2
NXF1-215ENST00000533440 LCE3AQ5TA76 89 aa2.53□□□□□ -2
NXF1-215ENST00000533440 SNURFQ9Y675 71 aa2.53□□□□□ -2
NXF1-215ENST00000533440 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
NXF1-215ENST00000533440 SPINT4Q6UDR6 99 aa2.48□□□□□ -2.01
NXF1-215ENST00000533440 KRTAP12-1P59990 96 aa2.47□□□□□ -2.01
NXF1-215ENST00000533440 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
NXF1-215ENST00000533440 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
NXF1-215ENST00000533440 SERP1Q9Y6X1 66 aa2.47□□□□□ -2.01
NXF1-215ENST00000533440 COA5Q86WW8 74 aa2.46□□□□□ -2.02
NXF1-215ENST00000533440 SERP2Q8N6R1 65 aa2.46□□□□□ -2.02
NXF1-215ENST00000533440 ANAPC13Q9BS18 74 aa2.45□□□□□ -2.02
NXF1-215ENST00000533440 PMAIP1Q13794 54 aa2.44□□□□□ -2.02
NXF1-215ENST00000533440 A0A1B0GU33 70 aa2.43□□□□□ -2.02
NXF1-215ENST00000533440 TNP1P09430 55 aa2.43□□□□□ -2.02
NXF1-215ENST00000533440 KRTAP12-3P60328 96 aa2.43□□□□□ -2.02
NXF1-215ENST00000533440 RPS28P62857 69 aaKnown RBP2.43□□□□□ -2.02
NXF1-215ENST00000533440 SPATA8Q6RVD6 105 aa2.43□□□□□ -2.02
NXF1-215ENST00000533440 OBSCNQ5VST9 7968 aa2.42□□□□□ -2.02
NXF1-215ENST00000533440 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
NXF1-215ENST00000533440 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
NXF1-215ENST00000533440 A8MU10 97 aa2.38□□□□□ -2.03
NXF1-215ENST00000533440 SMIM26A0A096LP01 95 aa2.37□□□□□ -2.03
NXF1-215ENST00000533440 CCDC179H3BU77 68 aa2.36□□□□□ -2.03
NXF1-215ENST00000533440 COX7CP15954 63 aa2.35□□□□□ -2.03
NXF1-215ENST00000533440 A0A1B0GU69 56 aa2.34□□□□□ -2.03
NXF1-215ENST00000533440 H7BZZ5 65 aa2.34□□□□□ -2.03
NXF1-215ENST00000533440 KRTAP9-6A8MVA2 160 aa2.33□□□□□ -2.04
NXF1-215ENST00000533440 KRTAP6-1Q3LI64 71 aa2.33□□□□□ -2.04
NXF1-215ENST00000533440 MT1AP04731 61 aa2.32□□□□□ -2.04
NXF1-215ENST00000533440 BRK1Q8WUW1 75 aa2.31□□□□□ -2.04
NXF1-215ENST00000533440 TMEM258P61165 79 aa2.29□□□□□ -2.04
NXF1-215ENST00000533440 KTN1-AS1Q86SY8 53 aa2.29□□□□□ -2.04
NXF1-215ENST00000533440 PSPHP1O15172 72 aa2.28□□□□□ -2.04
NXF1-215ENST00000533440 KRTAP6-2Q3LI66 62 aa2.28□□□□□ -2.04
NXF1-215ENST00000533440 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
NXF1-215ENST00000533440 PRR15LQ9BU68 103 aa2.26□□□□□ -2.05
NXF1-215ENST00000533440 LINC01558Q9Y6Z2 57 aa2.21□□□□□ -2.06
NXF1-215ENST00000533440 ATP5EP56381 51 aaPredicted RBP2.2□□□□□ -2.06
NXF1-215ENST00000533440 KRTAP25-1Q3LHN0 102 aa2.2□□□□□ -2.06
NXF1-215ENST00000533440 UQCR11O14957 56 aa2.17□□□□□ -2.06
NXF1-215ENST00000533440 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
NXF1-215ENST00000533440 MIR22HGQ0VDD5 57 aa2.11□□□□□ -2.07
NXF1-215ENST00000533440 K7ERS5 55 aa2.1□□□□□ -2.07
NXF1-215ENST00000533440 LUZP6Q538Z0 58 aa2.09□□□□□ -2.07
NXF1-215ENST00000533440 A6NED7 52 aa2.07□□□□□ -2.08
NXF1-215ENST00000533440 Q1T7F1 81 aa2.05□□□□□ -2.08
NXF1-215ENST00000533440 ROMO1P60602 79 aa2□□□□□ -2.09
NXF1-215ENST00000533440 CDC42SE1Q9NRR8 79 aa1.98□□□□□ -2.09
NXF1-215ENST00000533440 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
NXF1-215ENST00000533440 LCE1BQ5T7P3 118 aa1.93□□□□□ -2.1
NXF1-215ENST00000533440 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
NXF1-215ENST00000533440 LCE3DQ9BYE3 92 aa1.8□□□□□ -2.12
NXF1-215ENST00000533440 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
NXF1-215ENST00000533440 INE1O15225 51 aa1.6□□□□□ -2.15
NXF1-215ENST00000533440 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
NXF1-215ENST00000533440 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
NXF1-215ENST00000533440 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
NXF1-215ENST00000533440 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
NXF1-215ENST00000533440 PRM1P04553 51 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 142.5 ms