RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.75□□□□□ -1.65
CDC27-210ENST00000533415 KRTAP4-3Q9BYR4 195 aa4.74□□□□□ -1.65
CDC27-210ENST00000533415 LCE3CQ5T5A8 94 aa4.7□□□□□ -1.66
CDC27-210ENST00000533415 KRTAP19-3Q7Z4W3 81 aa4.65□□□□□ -1.67
CDC27-210ENST00000533415 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
CDC27-210ENST00000533415 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
CDC27-210ENST00000533415 KRTAP5-9P26371 169 aa4.61□□□□□ -1.67
CDC27-210ENST00000533415 NDUFAF8A1L188 74 aa4.59□□□□□ -1.67
CDC27-210ENST00000533415 MT1MQ8N339 61 aa4.59□□□□□ -1.67
CDC27-210ENST00000533415 LCE1AQ5T7P2 110 aa4.58□□□□□ -1.68
CDC27-210ENST00000533415 LOC100996750A0A140TA64 210 aa4.57□□□□□ -1.68
CDC27-210ENST00000533415 SPRR2EP22531 72 aa4.57□□□□□ -1.68
CDC27-210ENST00000533415 SPRR2BP35325 72 aa4.57□□□□□ -1.68
CDC27-210ENST00000533415 SPRR2AP35326 72 aa4.57□□□□□ -1.68
CDC27-210ENST00000533415 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
CDC27-210ENST00000533415 MT1GP13640 62 aa4.54□□□□□ -1.68
CDC27-210ENST00000533415 KRTAP6-3Q3LI67 103 aa4.52□□□□□ -1.69
CDC27-210ENST00000533415 LUZP6Q538Z0 58 aa4.49□□□□□ -1.69
CDC27-210ENST00000533415 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
CDC27-210ENST00000533415 NEBP20929 6669 aa4.42□□□□□ -1.7
CDC27-210ENST00000533415 SPRR2DP22532 72 aa4.38□□□□□ -1.71
CDC27-210ENST00000533415 KRTAP4-6Q9BYQ5 205 aa4.38□□□□□ -1.71
CDC27-210ENST00000533415 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
CDC27-210ENST00000533415 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
CDC27-210ENST00000533415 LCE3BQ5TA77 95 aa4.2□□□□□ -1.74
CDC27-210ENST00000533415 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
CDC27-210ENST00000533415 KRTAP5-5Q701N2 237 aaPredicted RBP4.09□□□□□ -1.75
CDC27-210ENST00000533415 KRTAP2-3P0C7H8 128 aa4.07□□□□□ -1.76
CDC27-210ENST00000533415 KRTAP2-4Q9BYR9 128 aa4.07□□□□□ -1.76
CDC27-210ENST00000533415 KRTAP2-1Q9BYU5 128 aa4.07□□□□□ -1.76
CDC27-210ENST00000533415 H3BS24 57 aa4.03□□□□□ -1.76
CDC27-210ENST00000533415 MT1AP04731 61 aa3.99□□□□□ -1.77
CDC27-210ENST00000533415 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
CDC27-210ENST00000533415 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
CDC27-210ENST00000533415 MT4P47944 62 aa3.94□□□□□ -1.78
CDC27-210ENST00000533415 KRTAP20-1Q3LI63 56 aa3.93□□□□□ -1.78
CDC27-210ENST00000533415 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
CDC27-210ENST00000533415 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
CDC27-210ENST00000533415 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
CDC27-210ENST00000533415 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
CDC27-210ENST00000533415 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
CDC27-210ENST00000533415 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
CDC27-210ENST00000533415 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
CDC27-210ENST00000533415 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
CDC27-210ENST00000533415 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
CDC27-210ENST00000533415 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
CDC27-210ENST00000533415 MT3P25713 68 aa3.59□□□□□ -1.83
CDC27-210ENST00000533415 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
CDC27-210ENST00000533415 KRTAP9-9Q9BYP9 154 aa3.57□□□□□ -1.84
CDC27-210ENST00000533415 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.85
CDC27-210ENST00000533415 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
CDC27-210ENST00000533415 INE1O15225 51 aa3.49□□□□□ -1.85
CDC27-210ENST00000533415 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
CDC27-210ENST00000533415 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
CDC27-210ENST00000533415 AHNAK2Q8IVF2 5795 aa3.36□□□□□ -1.87
CDC27-210ENST00000533415 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
CDC27-210ENST00000533415 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
CDC27-210ENST00000533415 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
CDC27-210ENST00000533415 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
CDC27-210ENST00000533415 PRM1P04553 51 aa3.1□□□□□ -1.91
CDC27-210ENST00000533415 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
CDC27-210ENST00000533415 KRTAP5-8O75690 187 aa3.07□□□□□ -1.92
CDC27-210ENST00000533415 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
CDC27-210ENST00000533415 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
CDC27-210ENST00000533415 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
CDC27-210ENST00000533415 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
CDC27-210ENST00000533415 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
CDC27-210ENST00000533415 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
CDC27-210ENST00000533415 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
CDC27-210ENST00000533415 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
CDC27-210ENST00000533415 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
CDC27-210ENST00000533415 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
CDC27-210ENST00000533415 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
CDC27-210ENST00000533415 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
CDC27-210ENST00000533415 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
CDC27-210ENST00000533415 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
CDC27-210ENST00000533415 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
CDC27-210ENST00000533415 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 14.2 ms