RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 LCE1DQ5T752 114 aa8.18□□□□□ -1.1
SMPD1-209ENST00000533196 UQCR11O14957 56 aa8.09□□□□□ -1.11
SMPD1-209ENST00000533196 TMEM258P61165 79 aa8.08□□□□□ -1.12
SMPD1-209ENST00000533196 KRTAP4-3Q9BYR4 195 aa8.06□□□□□ -1.12
SMPD1-209ENST00000533196 HMCN1Q96RW7 5635 aa8.06□□□□□ -1.12
SMPD1-209ENST00000533196 MT4P47944 62 aa8.05□□□□□ -1.12
SMPD1-209ENST00000533196 KRTAP5-4Q6L8H1 288 aa8.03□□□□□ -1.12
SMPD1-209ENST00000533196 KRTAP12-3P60328 96 aa8.02□□□□□ -1.13
SMPD1-209ENST00000533196 MIR22HGQ0VDD5 57 aa7.87□□□□□ -1.15
SMPD1-209ENST00000533196 KRTAP25-1Q3LHN0 102 aa7.87□□□□□ -1.15
SMPD1-209ENST00000533196 KRTAP4-7Q9BYR0 210 aa7.86□□□□□ -1.15
SMPD1-209ENST00000533196 KRTAP4-6Q9BYQ5 205 aa7.82□□□□□ -1.16
SMPD1-209ENST00000533196 K7ERS5 55 aa7.8□□□□□ -1.16
SMPD1-209ENST00000533196 AHNAK2Q8IVF2 5795 aa7.8□□□□□ -1.16
SMPD1-209ENST00000533196 V9GYY9 64 aa7.73□□□□□ -1.17
SMPD1-209ENST00000533196 KRTAP19-4Q3LI73 84 aa7.71□□□□□ -1.18
SMPD1-209ENST00000533196 KRTAP5-10Q6L8G5 202 aa7.66□□□□□ -1.18
SMPD1-209ENST00000533196 KRTAP5-5Q701N2 237 aaPredicted RBP7.66□□□□□ -1.18
SMPD1-209ENST00000533196 KRTAP23-1A1A580 65 aa7.62□□□□□ -1.19
SMPD1-209ENST00000533196 Q1T7F1 81 aa7.62□□□□□ -1.19
SMPD1-209ENST00000533196 PSPHP1O15172 72 aa7.6□□□□□ -1.19
SMPD1-209ENST00000533196 SPRR5A0A1B0GTR4 108 aa7.57□□□□□ -1.2
SMPD1-209ENST00000533196 KRTAP20-2Q3LI61 65 aa7.56□□□□□ -1.2
SMPD1-209ENST00000533196 KRTAP12-4P60329 112 aa7.51□□□□□ -1.21
SMPD1-209ENST00000533196 KRTAP15-1Q3LI76 137 aa7.47□□□□□ -1.21
SMPD1-209ENST00000533196 KRTAP5-3Q6L8H2 238 aa7.47□□□□□ -1.21
SMPD1-209ENST00000533196 PCP4P48539 62 aa7.46□□□□□ -1.22
SMPD1-209ENST00000533196 LOC100996750A0A140TA64 210 aa7.45□□□□□ -1.22
SMPD1-209ENST00000533196 SYNE1Q8NF91 8797 aaKnown RBP7.4□□□□□ -1.22
SMPD1-209ENST00000533196 KRTAP5-7Q6L8G8 165 aa7.4□□□□□ -1.22
SMPD1-209ENST00000533196 LCE3CQ5T5A8 94 aa7.38□□□□□ -1.23
SMPD1-209ENST00000533196 A6NED7 52 aa7.37□□□□□ -1.23
SMPD1-209ENST00000533196 CDC42SE1Q9NRR8 79 aa7.35□□□□□ -1.23
SMPD1-209ENST00000533196 ROMO1P60602 79 aa7.2□□□□□ -1.26
SMPD1-209ENST00000533196 RPS28P62857 69 aaKnown RBP7.15□□□□□ -1.26
SMPD1-209ENST00000533196 MT1AP04731 61 aa7.12□□□□□ -1.27
SMPD1-209ENST00000533196 KRTAP6-1Q3LI64 71 aa7.04□□□□□ -1.28
SMPD1-209ENST00000533196 KRTAP5-2Q701N4 177 aa7.02□□□□□ -1.29
SMPD1-209ENST00000533196 KRTAP4-11Q9BYQ6 195 aa6.93□□□□□ -1.3
SMPD1-209ENST00000533196 KRTAP9-6A8MVA2 160 aa6.9□□□□□ -1.3
SMPD1-209ENST00000533196 KRTAP9-4Q9BYQ2 154 aa6.89□□□□□ -1.31
SMPD1-209ENST00000533196 KRTAP6-2Q3LI66 62 aa6.74□□□□□ -1.33
SMPD1-209ENST00000533196 KRTAP5-8O75690 187 aa6.7□□□□□ -1.34
SMPD1-209ENST00000533196 OBSCNQ5VST9 7968 aa6.53□□□□□ -1.36
SMPD1-209ENST00000533196 MT3P25713 68 aa6.53□□□□□ -1.36
SMPD1-209ENST00000533196 AHNAKQ09666 5890 aaKnown RBP6.44□□□□□ -1.38
SMPD1-209ENST00000533196 MUC5BQ9HC84 5762 aaPredicted RBP6.44□□□□□ -1.38
SMPD1-209ENST00000533196 MUC5ACP98088 5654 aa6.41□□□□□ -1.38
SMPD1-209ENST00000533196 KRTAP9-9Q9BYP9 154 aa6.39□□□□□ -1.39
SMPD1-209ENST00000533196 BRK1Q8WUW1 75 aa6.31□□□□□ -1.4
SMPD1-209ENST00000533196 KRTAP5-1Q6L8H4 278 aa6.29□□□□□ -1.4
SMPD1-209ENST00000533196 LCE1EQ5T753 118 aa6.05□□□□□ -1.44
SMPD1-209ENST00000533196 PMAIP1Q13794 54 aa5.93□□□□□ -1.46
SMPD1-209ENST00000533196 PRO0628Q9UI54 55 aa5.84□□□□□ -1.47
SMPD1-209ENST00000533196 PRAC1Q96KF2 57 aa5.69□□□□□ -1.5
SMPD1-209ENST00000533196 KRTAP4-2Q9BYR5 136 aa5.67□□□□□ -1.5
SMPD1-209ENST00000533196 LCE1BQ5T7P3 118 aa5.62□□□□□ -1.51
SMPD1-209ENST00000533196 LCE1CQ5T751 118 aa5.6□□□□□ -1.51
SMPD1-209ENST00000533196 KTN1-AS1Q86SY8 53 aa5.51□□□□□ -1.53
SMPD1-209ENST00000533196 LCE3DQ9BYE3 92 aa5.31□□□□□ -1.56
SMPD1-209ENST00000533196 SVIPQ8NHG7 77 aa5.23□□□□□ -1.57
SMPD1-209ENST00000533196 KRTAP4-12Q9BQ66 201 aa5.11□□□□□ -1.59
SMPD1-209ENST00000533196 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.1□□□□□ -1.59
SMPD1-209ENST00000533196 KRTAP5-11Q6L8G4 156 aa5.08□□□□□ -1.6
SMPD1-209ENST00000533196 LCE1FQ5T754 118 aa5□□□□□ -1.61
SMPD1-209ENST00000533196 LCE3EQ5T5B0 92 aa4.98□□□□□ -1.61
SMPD1-209ENST00000533196 LUZP6Q538Z0 58 aa4.83□□□□□ -1.64
SMPD1-209ENST00000533196 KRTAP21-2Q3LI59 83 aa4.65□□□□□ -1.67
SMPD1-209ENST00000533196 PHGR1C9JFL3 82 aa4.45□□□□□ -1.7
SMPD1-209ENST00000533196 KRTAP4-4Q9BYR3 166 aa4.21□□□□□ -1.74
SMPD1-209ENST00000533196 NDUFAF8A1L188 74 aa4.18□□□□□ -1.74
SMPD1-209ENST00000533196 MUC19Q7Z5P9 8384 aa4.05□□□□□ -1.76
SMPD1-209ENST00000533196 PRM1P04553 51 aa3.64□□□□□ -1.83
SMPD1-209ENST00000533196 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
SMPD1-209ENST00000533196 KRTAP21-1Q3LI58 79 aa3.42□□□□□ -1.86
SMPD1-209ENST00000533196 INE1O15225 51 aa3.38□□□□□ -1.87
SMPD1-209ENST00000533196 MUC16Q8WXI7 14507 aa2.86□□□□□ -1.95
SMPD1-209ENST00000533196 H3BS24 57 aa2.66□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 127 ms