RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 KRTAP6-3Q3LI67 103 aa6.82□□□□□ -1.32
SMPD1-208ENST00000533123 KRTAP5-9P26371 169 aa6.82□□□□□ -1.32
SMPD1-208ENST00000533123 MUC12Q9UKN1 5478 aa6.81□□□□□ -1.32
SMPD1-208ENST00000533123 KRTAP9-7A8MTY7 169 aa6.8□□□□□ -1.32
SMPD1-208ENST00000533123 MT1EP04732 61 aa6.74□□□□□ -1.33
SMPD1-208ENST00000533123 MDN1Q9NU22 5596 aa6.68□□□□□ -1.34
SMPD1-208ENST00000533123 MT1LQ93083 61 aa6.57□□□□□ -1.36
SMPD1-208ENST00000533123 LCE1AQ5T7P2 110 aa6.56□□□□□ -1.36
SMPD1-208ENST00000533123 SPRR2EP22531 72 aa6.55□□□□□ -1.36
SMPD1-208ENST00000533123 SPRR2BP35325 72 aa6.55□□□□□ -1.36
SMPD1-208ENST00000533123 SPRR2AP35326 72 aa6.55□□□□□ -1.36
SMPD1-208ENST00000533123 KRTAP19-3Q7Z4W3 81 aa6.53□□□□□ -1.36
SMPD1-208ENST00000533123 LCE3CQ5T5A8 94 aa6.48□□□□□ -1.37
SMPD1-208ENST00000533123 NEBP20929 6669 aa6.47□□□□□ -1.37
SMPD1-208ENST00000533123 LCE5AQ5TCM9 118 aa6.46□□□□□ -1.38
SMPD1-208ENST00000533123 MT1GP13640 62 aa6.44□□□□□ -1.38
SMPD1-208ENST00000533123 KRTAP4-7Q9BYR0 210 aa6.41□□□□□ -1.38
SMPD1-208ENST00000533123 INE1O15225 51 aa6.4□□□□□ -1.39
SMPD1-208ENST00000533123 MT1MQ8N339 61 aa6.37□□□□□ -1.39
SMPD1-208ENST00000533123 SPRR2DP22532 72 aa6.31□□□□□ -1.4
SMPD1-208ENST00000533123 KRTAP19-4Q3LI73 84 aa6.3□□□□□ -1.4
SMPD1-208ENST00000533123 DSTQ03001 7570 aaKnown RBP6.3□□□□□ -1.4
SMPD1-208ENST00000533123 KRTAP4-3Q9BYR4 195 aa6.27□□□□□ -1.4
SMPD1-208ENST00000533123 KRTAP9-6A8MVA2 160 aa6.21□□□□□ -1.42
SMPD1-208ENST00000533123 LCE3BQ5TA77 95 aa6.09□□□□□ -1.44
SMPD1-208ENST00000533123 KRTAP2-3P0C7H8 128 aa6.02□□□□□ -1.45
SMPD1-208ENST00000533123 KRTAP2-4Q9BYR9 128 aa6.02□□□□□ -1.45
SMPD1-208ENST00000533123 LOC100996750A0A140TA64 210 aa6.02□□□□□ -1.45
SMPD1-208ENST00000533123 KRTAP20-1Q3LI63 56 aa6□□□□□ -1.45
SMPD1-208ENST00000533123 KRTAP2-2Q9BYT5 123 aa5.89□□□□□ -1.47
SMPD1-208ENST00000533123 KRTAP2-1Q9BYU5 128 aa5.89□□□□□ -1.47
SMPD1-208ENST00000533123 KRTAP5-5Q701N2 237 aaPredicted RBP5.76□□□□□ -1.49
SMPD1-208ENST00000533123 KRTAP5-4Q6L8H1 288 aa5.62□□□□□ -1.51
SMPD1-208ENST00000533123 LCE4AQ5TA78 99 aa5.57□□□□□ -1.52
SMPD1-208ENST00000533123 MT1AP04731 61 aa5.56□□□□□ -1.52
SMPD1-208ENST00000533123 KRTAP6-1Q3LI64 71 aa5.55□□□□□ -1.52
SMPD1-208ENST00000533123 KRTAP4-9Q9BYQ8 210 aa5.54□□□□□ -1.52
SMPD1-208ENST00000533123 SYNE1Q8NF91 8797 aaKnown RBP5.53□□□□□ -1.52
SMPD1-208ENST00000533123 MT4P47944 62 aa5.52□□□□□ -1.53
SMPD1-208ENST00000533123 LCE1DQ5T752 114 aa5.45□□□□□ -1.54
SMPD1-208ENST00000533123 KRTAP4-6Q9BYQ5 205 aa5.44□□□□□ -1.54
SMPD1-208ENST00000533123 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
SMPD1-208ENST00000533123 HMCN1Q96RW7 5635 aa5.4□□□□□ -1.54
SMPD1-208ENST00000533123 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
SMPD1-208ENST00000533123 KRTAP20-2Q3LI61 65 aa5.28□□□□□ -1.56
SMPD1-208ENST00000533123 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
SMPD1-208ENST00000533123 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
SMPD1-208ENST00000533123 MT3P25713 68 aa5.06□□□□□ -1.6
SMPD1-208ENST00000533123 KRTAP5-2Q701N4 177 aa5.05□□□□□ -1.6
SMPD1-208ENST00000533123 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
SMPD1-208ENST00000533123 LCE3DQ9BYE3 92 aa4.88□□□□□ -1.63
SMPD1-208ENST00000533123 AHNAK2Q8IVF2 5795 aa4.87□□□□□ -1.63
SMPD1-208ENST00000533123 LCE3EQ5T5B0 92 aa4.74□□□□□ -1.65
SMPD1-208ENST00000533123 KRTAP5-10Q6L8G5 202 aa4.67□□□□□ -1.66
SMPD1-208ENST00000533123 KRTAP4-11Q9BYQ6 195 aa4.66□□□□□ -1.66
SMPD1-208ENST00000533123 GPR98Q8WXG9 6306 aa4.63□□□□□ -1.67
SMPD1-208ENST00000533123 PRM1P04553 51 aa4.62□□□□□ -1.67
SMPD1-208ENST00000533123 KRTAP5-8O75690 187 aa4.49□□□□□ -1.69
SMPD1-208ENST00000533123 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
SMPD1-208ENST00000533123 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
SMPD1-208ENST00000533123 KRTAP5-7Q6L8G8 165 aa4.35□□□□□ -1.71
SMPD1-208ENST00000533123 MUC5ACP98088 5654 aa4.29□□□□□ -1.72
SMPD1-208ENST00000533123 LCE1BQ5T7P3 118 aa4.22□□□□□ -1.73
SMPD1-208ENST00000533123 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
SMPD1-208ENST00000533123 LCE1CQ5T751 118 aa4.15□□□□□ -1.75
SMPD1-208ENST00000533123 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
SMPD1-208ENST00000533123 MUC5BQ9HC84 5762 aaPredicted RBP3.96□□□□□ -1.78
SMPD1-208ENST00000533123 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
SMPD1-208ENST00000533123 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
SMPD1-208ENST00000533123 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
SMPD1-208ENST00000533123 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
SMPD1-208ENST00000533123 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
SMPD1-208ENST00000533123 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
SMPD1-208ENST00000533123 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
SMPD1-208ENST00000533123 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
SMPD1-208ENST00000533123 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
SMPD1-208ENST00000533123 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
SMPD1-208ENST00000533123 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 136 ms