RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 KRTAP5-11Q6L8G4 156 aa4.9□□□□□ -1.63
CDC27-209ENST00000532893 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
CDC27-209ENST00000532893 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.86□□□□□ -1.63
CDC27-209ENST00000532893 SPINT4Q6UDR6 99 aa4.86□□□□□ -1.63
CDC27-209ENST00000532893 C10orf95Q9H7T3 257 aa4.86□□□□□ -1.63
CDC27-209ENST00000532893 SERP2Q8N6R1 65 aa4.84□□□□□ -1.63
CDC27-209ENST00000532893 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
CDC27-209ENST00000532893 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
CDC27-209ENST00000532893 MT3P25713 68 aa4.78□□□□□ -1.64
CDC27-209ENST00000532893 LCE1EQ5T753 118 aa4.78□□□□□ -1.64
CDC27-209ENST00000532893 SPATA8Q6RVD6 105 aa4.78□□□□□ -1.64
CDC27-209ENST00000532893 KRTAP5-5Q701N2 237 aaPredicted RBP4.77□□□□□ -1.65
CDC27-209ENST00000532893 KRTAP12-1P59990 96 aa4.76□□□□□ -1.65
CDC27-209ENST00000532893 SPANXA2-OT1Q8N9U9 137 aa4.75□□□□□ -1.65
CDC27-209ENST00000532893 COX7CP15954 63 aa4.72□□□□□ -1.65
CDC27-209ENST00000532893 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
CDC27-209ENST00000532893 SERP1Q9Y6X1 66 aa4.68□□□□□ -1.66
CDC27-209ENST00000532893 TNP1P09430 55 aa4.66□□□□□ -1.66
CDC27-209ENST00000532893 SEC61GP60059 68 aa4.66□□□□□ -1.66
CDC27-209ENST00000532893 A0A1B0GU33 70 aa4.64□□□□□ -1.67
CDC27-209ENST00000532893 COA5Q86WW8 74 aa4.63□□□□□ -1.67
CDC27-209ENST00000532893 H7BZZ5 65 aa4.62□□□□□ -1.67
CDC27-209ENST00000532893 ANAPC13Q9BS18 74 aa4.62□□□□□ -1.67
CDC27-209ENST00000532893 KRTAP12-3P60328 96 aa4.61□□□□□ -1.67
CDC27-209ENST00000532893 AHNAKQ09666 5890 aaKnown RBP4.58□□□□□ -1.68
CDC27-209ENST00000532893 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
CDC27-209ENST00000532893 CCDC179H3BU77 68 aa4.54□□□□□ -1.68
CDC27-209ENST00000532893 MUC5BQ9HC84 5762 aaPredicted RBP4.54□□□□□ -1.68
CDC27-209ENST00000532893 KRTAP5-8O75690 187 aa4.51□□□□□ -1.69
CDC27-209ENST00000532893 SMIM26A0A096LP01 95 aa4.5□□□□□ -1.69
CDC27-209ENST00000532893 A8MU10 97 aa4.5□□□□□ -1.69
CDC27-209ENST00000532893 PCP4P48539 62 aa4.48□□□□□ -1.69
CDC27-209ENST00000532893 A0A0A0MQY5 61 aa4.46□□□□□ -1.7
CDC27-209ENST00000532893 KRTAP5-2Q701N4 177 aa4.46□□□□□ -1.7
CDC27-209ENST00000532893 A0A1B0GU69 56 aa4.4□□□□□ -1.71
CDC27-209ENST00000532893 ATP5EP56381 51 aaPredicted RBP4.39□□□□□ -1.71
CDC27-209ENST00000532893 TMEM258P61165 79 aa4.33□□□□□ -1.72
CDC27-209ENST00000532893 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
CDC27-209ENST00000532893 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
CDC27-209ENST00000532893 MT1AP04731 61 aa4.3□□□□□ -1.72
CDC27-209ENST00000532893 LCE1FQ5T754 118 aa4.3□□□□□ -1.72
CDC27-209ENST00000532893 LINC01558Q9Y6Z2 57 aa4.29□□□□□ -1.72
CDC27-209ENST00000532893 PRR15LQ9BU68 103 aa4.28□□□□□ -1.72
CDC27-209ENST00000532893 SVIPQ8NHG7 77 aa4.26□□□□□ -1.73
CDC27-209ENST00000532893 KRTAP6-2Q3LI66 62 aa4.23□□□□□ -1.73
CDC27-209ENST00000532893 KRTAP5-1Q6L8H4 278 aa4.22□□□□□ -1.73
CDC27-209ENST00000532893 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
CDC27-209ENST00000532893 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
CDC27-209ENST00000532893 KRTAP25-1Q3LHN0 102 aa4.19□□□□□ -1.74
CDC27-209ENST00000532893 UQCR11O14957 56 aa4.15□□□□□ -1.75
CDC27-209ENST00000532893 PSPHP1O15172 72 aa4.09□□□□□ -1.75
CDC27-209ENST00000532893 V9GYY9 64 aa4.09□□□□□ -1.75
CDC27-209ENST00000532893 MIR22HGQ0VDD5 57 aa4.08□□□□□ -1.76
CDC27-209ENST00000532893 Q1T7F1 81 aa4.08□□□□□ -1.76
CDC27-209ENST00000532893 KRTAP4-4Q9BYR3 166 aa4.04□□□□□ -1.76
CDC27-209ENST00000532893 RPS28P62857 69 aaKnown RBP3.98□□□□□ -1.77
CDC27-209ENST00000532893 K7ERS5 55 aa3.96□□□□□ -1.78
CDC27-209ENST00000532893 A6NED7 52 aa3.93□□□□□ -1.78
CDC27-209ENST00000532893 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
CDC27-209ENST00000532893 CDC42SE1Q9NRR8 79 aa3.77□□□□□ -1.81
CDC27-209ENST00000532893 ROMO1P60602 79 aa3.73□□□□□ -1.81
CDC27-209ENST00000532893 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
CDC27-209ENST00000532893 PRAC1Q96KF2 57 aa3.65□□□□□ -1.83
CDC27-209ENST00000532893 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
CDC27-209ENST00000532893 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
CDC27-209ENST00000532893 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
CDC27-209ENST00000532893 PMAIP1Q13794 54 aa3.31□□□□□ -1.88
CDC27-209ENST00000532893 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
CDC27-209ENST00000532893 PRO0628Q9UI54 55 aa3.13□□□□□ -1.91
CDC27-209ENST00000532893 KTN1-AS1Q86SY8 53 aa2.96□□□□□ -1.94
CDC27-209ENST00000532893 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
CDC27-209ENST00000532893 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
CDC27-209ENST00000532893 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
CDC27-209ENST00000532893 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
CDC27-209ENST00000532893 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
CDC27-209ENST00000532893 PRM1P04553 51 aa1.92□□□□□ -2.1
CDC27-209ENST00000532893 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
CDC27-209ENST00000532893 INE1O15225 51 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 127 ms