RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-223ENST00000532678 A0A1B0GU33 70 aa3.35□□□□□ -1.87
PUM1-223ENST00000532678 SPRR2EP22531 72 aa3.35□□□□□ -1.87
PUM1-223ENST00000532678 SPRR2BP35325 72 aa3.35□□□□□ -1.87
PUM1-223ENST00000532678 SPRR2AP35326 72 aa3.35□□□□□ -1.87
PUM1-223ENST00000532678 MT1XP80297 61 aa3.35□□□□□ -1.87
PUM1-223ENST00000532678 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
PUM1-223ENST00000532678 SPATA8Q6RVD6 105 aa3.34□□□□□ -1.87
PUM1-223ENST00000532678 KRTAP2-3P0C7H8 128 aa3.33□□□□□ -1.88
PUM1-223ENST00000532678 KRTAP2-4Q9BYR9 128 aa3.33□□□□□ -1.88
PUM1-223ENST00000532678 RPS28P62857 69 aaKnown RBP3.32□□□□□ -1.88
PUM1-223ENST00000532678 A0A0D9SG42 100 aa3.31□□□□□ -1.88
PUM1-223ENST00000532678 PRR15LQ9BU68 103 aa3.31□□□□□ -1.88
PUM1-223ENST00000532678 LINC01558Q9Y6Z2 57 aa3.31□□□□□ -1.88
PUM1-223ENST00000532678 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
PUM1-223ENST00000532678 KRTAP8-1Q8IUC2 63 aa3.28□□□□□ -1.88
PUM1-223ENST00000532678 SPINT4Q6UDR6 99 aa3.25□□□□□ -1.89
PUM1-223ENST00000532678 KRTAP12-1P59990 96 aa3.24□□□□□ -1.89
PUM1-223ENST00000532678 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
PUM1-223ENST00000532678 SPRR2DP22532 72 aa3.23□□□□□ -1.89
PUM1-223ENST00000532678 KRTAP12-2P59991 146 aa3.23□□□□□ -1.89
PUM1-223ENST00000532678 KRTAP2-1Q9BYU5 128 aa3.21□□□□□ -1.9
PUM1-223ENST00000532678 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
PUM1-223ENST00000532678 UQCR11O14957 56 aa3.19□□□□□ -1.9
PUM1-223ENST00000532678 Q1T7F1 81 aa3.19□□□□□ -1.9
PUM1-223ENST00000532678 K7ERS5 55 aa3.15□□□□□ -1.91
PUM1-223ENST00000532678 MIR22HGQ0VDD5 57 aa3.15□□□□□ -1.91
PUM1-223ENST00000532678 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
PUM1-223ENST00000532678 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
PUM1-223ENST00000532678 KTN1-AS1Q86SY8 53 aa3.12□□□□□ -1.91
PUM1-223ENST00000532678 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
PUM1-223ENST00000532678 A6NED7 52 aa3.08□□□□□ -1.92
PUM1-223ENST00000532678 C10orf95Q9H7T3 257 aa3.08□□□□□ -1.92
PUM1-223ENST00000532678 TNP1P09430 55 aa3.03□□□□□ -1.92
PUM1-223ENST00000532678 BRK1Q8WUW1 75 aa3.02□□□□□ -1.93
PUM1-223ENST00000532678 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
PUM1-223ENST00000532678 DSTQ03001 7570 aaKnown RBP2.99□□□□□ -1.93
PUM1-223ENST00000532678 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
PUM1-223ENST00000532678 MT1EP04732 61 aa2.97□□□□□ -1.93
PUM1-223ENST00000532678 KRTAP19-5Q3LI72 72 aa2.97□□□□□ -1.93
PUM1-223ENST00000532678 CDC42SE1Q9NRR8 79 aa2.97□□□□□ -1.93
PUM1-223ENST00000532678 KRTAP25-1Q3LHN0 102 aa2.94□□□□□ -1.94
PUM1-223ENST00000532678 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
PUM1-223ENST00000532678 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
PUM1-223ENST00000532678 ROMO1P60602 79 aa2.87□□□□□ -1.95
PUM1-223ENST00000532678 MT4P47944 62 aa2.86□□□□□ -1.95
PUM1-223ENST00000532678 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
PUM1-223ENST00000532678 MT1LQ93083 61 aa2.86□□□□□ -1.95
PUM1-223ENST00000532678 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
PUM1-223ENST00000532678 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.95
PUM1-223ENST00000532678 MT1GP13640 62 aa2.84□□□□□ -1.95
PUM1-223ENST00000532678 KRTAP4-3Q9BYR4 195 aa2.84□□□□□ -1.95
PUM1-223ENST00000532678 PP632Q6XCG6 107 aa2.83□□□□□ -1.96
PUM1-223ENST00000532678 MT1MQ8N339 61 aa2.82□□□□□ -1.96
PUM1-223ENST00000532678 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
PUM1-223ENST00000532678 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
PUM1-223ENST00000532678 SPRR5A0A1B0GTR4 108 aa2.66□□□□□ -1.98
PUM1-223ENST00000532678 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
PUM1-223ENST00000532678 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
PUM1-223ENST00000532678 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
PUM1-223ENST00000532678 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
PUM1-223ENST00000532678 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
PUM1-223ENST00000532678 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
PUM1-223ENST00000532678 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
PUM1-223ENST00000532678 KRTAP12-4P60329 112 aa2.51□□□□□ -2.01
PUM1-223ENST00000532678 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
PUM1-223ENST00000532678 MT1AP04731 61 aa2.44□□□□□ -2.02
PUM1-223ENST00000532678 KRTAP6-1Q3LI64 71 aa2.41□□□□□ -2.02
PUM1-223ENST00000532678 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
PUM1-223ENST00000532678 INE1O15225 51 aa2.34□□□□□ -2.03
PUM1-223ENST00000532678 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
PUM1-223ENST00000532678 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
PUM1-223ENST00000532678 KRTAP6-2Q3LI66 62 aa2.3□□□□□ -2.04
PUM1-223ENST00000532678 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
PUM1-223ENST00000532678 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
PUM1-223ENST00000532678 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
PUM1-223ENST00000532678 PRM1P04553 51 aa1.49□□□□□ -2.17
PUM1-223ENST00000532678 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
PUM1-223ENST00000532678 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms