RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 MT1EP04732 61 aa8.01□□□□□ -1.13
PACSIN3-209ENST00000532457 NEBP20929 6669 aa7.99□□□□□ -1.13
PACSIN3-209ENST00000532457 SPRR2EP22531 72 aa7.96□□□□□ -1.14
PACSIN3-209ENST00000532457 SPRR2BP35325 72 aa7.96□□□□□ -1.14
PACSIN3-209ENST00000532457 SPRR2AP35326 72 aa7.96□□□□□ -1.14
PACSIN3-209ENST00000532457 LCE1AQ5T7P2 110 aa7.91□□□□□ -1.14
PACSIN3-209ENST00000532457 MT1LQ93083 61 aa7.82□□□□□ -1.16
PACSIN3-209ENST00000532457 KRTAP19-3Q7Z4W3 81 aa7.73□□□□□ -1.17
PACSIN3-209ENST00000532457 SPRR2DP22532 72 aa7.69□□□□□ -1.18
PACSIN3-209ENST00000532457 LCE5AQ5TCM9 118 aa7.66□□□□□ -1.18
PACSIN3-209ENST00000532457 KRTAP4-7Q9BYR0 210 aa7.65□□□□□ -1.18
PACSIN3-209ENST00000532457 MT1GP13640 62 aa7.64□□□□□ -1.19
PACSIN3-209ENST00000532457 SPRR5A0A1B0GTR4 108 aa7.63□□□□□ -1.19
PACSIN3-209ENST00000532457 LCE3CQ5T5A8 94 aa7.62□□□□□ -1.19
PACSIN3-209ENST00000532457 KRTAP20-1Q3LI63 56 aa7.58□□□□□ -1.2
PACSIN3-209ENST00000532457 KRTAP2-3P0C7H8 128 aa7.55□□□□□ -1.2
PACSIN3-209ENST00000532457 MT1MQ8N339 61 aa7.55□□□□□ -1.2
PACSIN3-209ENST00000532457 KRTAP2-4Q9BYR9 128 aa7.55□□□□□ -1.2
PACSIN3-209ENST00000532457 KRTAP19-4Q3LI73 84 aa7.52□□□□□ -1.21
PACSIN3-209ENST00000532457 NDUFAF8A1L188 74 aa7.49□□□□□ -1.21
PACSIN3-209ENST00000532457 KRTAP4-3Q9BYR4 195 aa7.49□□□□□ -1.21
PACSIN3-209ENST00000532457 LUZP6Q538Z0 58 aa7.47□□□□□ -1.21
PACSIN3-209ENST00000532457 LCE3BQ5TA77 95 aa7.43□□□□□ -1.22
PACSIN3-209ENST00000532457 DSTQ03001 7570 aaKnown RBP7.39□□□□□ -1.23
PACSIN3-209ENST00000532457 KRTAP2-2Q9BYT5 123 aa7.35□□□□□ -1.23
PACSIN3-209ENST00000532457 KRTAP2-1Q9BYU5 128 aa7.35□□□□□ -1.23
PACSIN3-209ENST00000532457 KRTAP9-6A8MVA2 160 aa7.29□□□□□ -1.24
PACSIN3-209ENST00000532457 LOC100996750A0A140TA64 210 aa7.18□□□□□ -1.26
PACSIN3-209ENST00000532457 H3BS24 57 aa7.13□□□□□ -1.27
PACSIN3-209ENST00000532457 LCE4AQ5TA78 99 aa6.85□□□□□ -1.31
PACSIN3-209ENST00000532457 KRTAP5-5Q701N2 237 aaPredicted RBP6.84□□□□□ -1.31
PACSIN3-209ENST00000532457 KRTAP5-4Q6L8H1 288 aa6.79□□□□□ -1.32
PACSIN3-209ENST00000532457 KRTAP4-9Q9BYQ8 210 aa6.73□□□□□ -1.33
PACSIN3-209ENST00000532457 MT4P47944 62 aa6.66□□□□□ -1.34
PACSIN3-209ENST00000532457 LCE1DQ5T752 114 aa6.66□□□□□ -1.34
PACSIN3-209ENST00000532457 A0A0A0MQY5 61 aa6.62□□□□□ -1.35
PACSIN3-209ENST00000532457 KRTAP6-1Q3LI64 71 aa6.62□□□□□ -1.35
PACSIN3-209ENST00000532457 MT1AP04731 61 aa6.62□□□□□ -1.35
PACSIN3-209ENST00000532457 HMCN1Q96RW7 5635 aa6.61□□□□□ -1.35
PACSIN3-209ENST00000532457 KRTAP12-4P60329 112 aa6.55□□□□□ -1.36
PACSIN3-209ENST00000532457 KRTAP4-6Q9BYQ5 205 aa6.53□□□□□ -1.36
PACSIN3-209ENST00000532457 SYNE1Q8NF91 8797 aaKnown RBP6.48□□□□□ -1.37
PACSIN3-209ENST00000532457 KRTAP20-2Q3LI61 65 aa6.38□□□□□ -1.39
PACSIN3-209ENST00000532457 KRTAP9-4Q9BYQ2 154 aa6.34□□□□□ -1.4
PACSIN3-209ENST00000532457 INE1O15225 51 aa6.18□□□□□ -1.42
PACSIN3-209ENST00000532457 KRTAP5-3Q6L8H2 238 aa6.15□□□□□ -1.42
PACSIN3-209ENST00000532457 KRTAP6-2Q3LI66 62 aa6.12□□□□□ -1.43
PACSIN3-209ENST00000532457 AHNAK2Q8IVF2 5795 aa6.1□□□□□ -1.43
PACSIN3-209ENST00000532457 KRTAP5-2Q701N4 177 aa6.04□□□□□ -1.44
PACSIN3-209ENST00000532457 MT3P25713 68 aa5.99□□□□□ -1.45
PACSIN3-209ENST00000532457 GPR98Q8WXG9 6306 aa5.98□□□□□ -1.45
PACSIN3-209ENST00000532457 KRTAP5-10Q6L8G5 202 aa5.88□□□□□ -1.47
PACSIN3-209ENST00000532457 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
PACSIN3-209ENST00000532457 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
PACSIN3-209ENST00000532457 LCE3DQ9BYE3 92 aa5.67□□□□□ -1.5
PACSIN3-209ENST00000532457 KRTAP5-7Q6L8G8 165 aa5.58□□□□□ -1.52
PACSIN3-209ENST00000532457 LCE3EQ5T5B0 92 aa5.48□□□□□ -1.53
PACSIN3-209ENST00000532457 KRTAP5-8O75690 187 aa5.47□□□□□ -1.53
PACSIN3-209ENST00000532457 LCE1EQ5T753 118 aa5.34□□□□□ -1.55
PACSIN3-209ENST00000532457 KRTAP5-1Q6L8H4 278 aa5.32□□□□□ -1.56
PACSIN3-209ENST00000532457 MUC5ACP98088 5654 aa5.2□□□□□ -1.58
PACSIN3-209ENST00000532457 KRTAP9-9Q9BYP9 154 aa5.13□□□□□ -1.59
PACSIN3-209ENST00000532457 MUC5BQ9HC84 5762 aaPredicted RBP4.98□□□□□ -1.61
PACSIN3-209ENST00000532457 LCE1BQ5T7P3 118 aa4.97□□□□□ -1.61
PACSIN3-209ENST00000532457 LCE1CQ5T751 118 aa4.95□□□□□ -1.62
PACSIN3-209ENST00000532457 KRTAP4-2Q9BYR5 136 aa4.95□□□□□ -1.62
PACSIN3-209ENST00000532457 PRM1P04553 51 aa4.85□□□□□ -1.63
PACSIN3-209ENST00000532457 AHNAKQ09666 5890 aaKnown RBP4.84□□□□□ -1.63
PACSIN3-209ENST00000532457 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.58□□□□□ -1.68
PACSIN3-209ENST00000532457 KRTAP5-11Q6L8G4 156 aa4.42□□□□□ -1.7
PACSIN3-209ENST00000532457 KRTAP21-2Q3LI59 83 aa4.35□□□□□ -1.71
PACSIN3-209ENST00000532457 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
PACSIN3-209ENST00000532457 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
PACSIN3-209ENST00000532457 KRTAP4-4Q9BYR3 166 aa3.92□□□□□ -1.78
PACSIN3-209ENST00000532457 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
PACSIN3-209ENST00000532457 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
PACSIN3-209ENST00000532457 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
PACSIN3-209ENST00000532457 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 9.7 ms