RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	TNP1	P09430	55 aa		6.37	□□□□□ -1.39
CTSB-223	ENST00000532370	CDC42SE1	Q9NRR8	79 aa		6.36	□□□□□ -1.39
CTSB-223	ENST00000532370	LCE3A	Q5TA76	89 aa		6.34	□□□□□ -1.39
CTSB-223	ENST00000532370	DST	Q03001	7570 aa	Known RBP	6.3	□□□□□ -1.4
CTSB-223	ENST00000532370	MT1G	P13640	62 aa		6.23	□□□□□ -1.41
CTSB-223	ENST00000532370	MT1L	Q93083	61 aa		6.21	□□□□□ -1.42
CTSB-223	ENST00000532370	KRTAP25-1	Q3LHN0	102 aa		6.2	□□□□□ -1.42
CTSB-223	ENST00000532370	MT1M	Q8N339	61 aa		6.15	□□□□□ -1.42
CTSB-223	ENST00000532370	PP632	Q6XCG6	107 aa		6.14	□□□□□ -1.43
CTSB-223	ENST00000532370	GPR98	Q8WXG9	6306 aa		6.11	□□□□□ -1.43
CTSB-223	ENST00000532370	KRTAP12-3	P60328	96 aa		6.09	□□□□□ -1.43
CTSB-223	ENST00000532370	ROMO1	P60602	79 aa		6.09	□□□□□ -1.43
CTSB-223	ENST00000532370	KRTAP4-3	Q9BYR4	195 aa		6.07	□□□□□ -1.44
CTSB-223	ENST00000532370	BRK1	Q8WUW1	75 aa		6.04	□□□□□ -1.44
CTSB-223	ENST00000532370	KRTAP23-1	A1A580	65 aa		6.02	□□□□□ -1.45
CTSB-223	ENST00000532370	KRTAP4-9	Q9BYQ8	210 aa		5.99	□□□□□ -1.45
CTSB-223	ENST00000532370	KRTAP4-7	Q9BYR0	210 aa		5.98	□□□□□ -1.45
CTSB-223	ENST00000532370	HMCN1	Q96RW7	5635 aa		5.88	□□□□□ -1.47
CTSB-223	ENST00000532370	LCE1D	Q5T752	114 aa		5.84	□□□□□ -1.47
CTSB-223	ENST00000532370	LCE4A	Q5TA78	99 aa		5.82	□□□□□ -1.48
CTSB-223	ENST00000532370	MT4	P47944	62 aa		5.81	□□□□□ -1.48
CTSB-223	ENST00000532370	KRTAP5-4	Q6L8H1	288 aa		5.78	□□□□□ -1.48
CTSB-223	ENST00000532370	KRTAP15-1	Q3LI76	137 aa		5.72	□□□□□ -1.49
CTSB-223	ENST00000532370	PMAIP1	Q13794	54 aa		5.71	□□□□□ -1.5
CTSB-223	ENST00000532370	KRTAP19-4	Q3LI73	84 aa		5.69	□□□□□ -1.5
CTSB-223	ENST00000532370	KRTAP4-6	Q9BYQ5	205 aa		5.68	□□□□□ -1.5
CTSB-223	ENST00000532370	PRO0628	Q9UI54	55 aa		5.68	□□□□□ -1.5
CTSB-223	ENST00000532370	LOC100996750	A0A140TA64	210 aa		5.65	□□□□□ -1.5
CTSB-223	ENST00000532370	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.64	□□□□□ -1.51
CTSB-223	ENST00000532370	AHNAK2	Q8IVF2	5795 aa		5.63	□□□□□ -1.51
CTSB-223	ENST00000532370	LCE3C	Q5T5A8	94 aa		5.62	□□□□□ -1.51
CTSB-223	ENST00000532370	SVIP	Q8NHG7	77 aa		5.49	□□□□□ -1.53
CTSB-223	ENST00000532370	SYNE1	Q8NF91	8797 aa	Known RBP	5.49	□□□□□ -1.53
CTSB-223	ENST00000532370	KRTAP20-2	Q3LI61	65 aa		5.45	□□□□□ -1.54
CTSB-223	ENST00000532370	KRTAP5-10	Q6L8G5	202 aa		5.43	□□□□□ -1.54
CTSB-223	ENST00000532370	KRTAP12-4	P60329	112 aa		5.42	□□□□□ -1.54
CTSB-223	ENST00000532370	SPRR5	A0A1B0GTR4	108 aa		5.41	□□□□□ -1.54
CTSB-223	ENST00000532370	PRAC1	Q96KF2	57 aa		5.4	□□□□□ -1.54
CTSB-223	ENST00000532370	KRTAP9-6	A8MVA2	160 aa		5.35	□□□□□ -1.55
CTSB-223	ENST00000532370	KRTAP5-7	Q6L8G8	165 aa		5.33	□□□□□ -1.56
CTSB-223	ENST00000532370	KTN1-AS1	Q86SY8	53 aa		5.33	□□□□□ -1.56
CTSB-223	ENST00000532370	KRTAP5-3	Q6L8H2	238 aa		5.29	□□□□□ -1.56
CTSB-223	ENST00000532370	MT1A	P04731	61 aa		5.27	□□□□□ -1.57
CTSB-223	ENST00000532370	KRTAP6-1	Q3LI64	71 aa		5.27	□□□□□ -1.57
CTSB-223	ENST00000532370	KRTAP5-2	Q701N4	177 aa		5.09	□□□□□ -1.59
CTSB-223	ENST00000532370	KRTAP9-4	Q9BYQ2	154 aa		5.09	□□□□□ -1.59
CTSB-223	ENST00000532370	KRTAP6-2	Q3LI66	62 aa		5.01	□□□□□ -1.61
CTSB-223	ENST00000532370	KRTAP4-11	Q9BYQ6	195 aa		4.95	□□□□□ -1.62
CTSB-223	ENST00000532370	OBSCN	Q5VST9	7968 aa		4.82	□□□□□ -1.64
CTSB-223	ENST00000532370	MT3	P25713	68 aa		4.81	□□□□□ -1.64
CTSB-223	ENST00000532370	KRTAP5-8	O75690	187 aa		4.78	□□□□□ -1.64
CTSB-223	ENST00000532370	AHNAK	Q09666	5890 aa	Known RBP	4.66	□□□□□ -1.66
CTSB-223	ENST00000532370	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.64	□□□□□ -1.67
CTSB-223	ENST00000532370	MUC5AC	P98088	5654 aa		4.62	□□□□□ -1.67
CTSB-223	ENST00000532370	KRTAP5-1	Q6L8H4	278 aa		4.55	□□□□□ -1.68
CTSB-223	ENST00000532370	LUZP6	Q538Z0	58 aa		4.48	□□□□□ -1.69
CTSB-223	ENST00000532370	KRTAP9-9	Q9BYP9	154 aa		4.48	□□□□□ -1.69
CTSB-223	ENST00000532370	LCE1E	Q5T753	118 aa		4.37	□□□□□ -1.71
CTSB-223	ENST00000532370	LCE1B	Q5T7P3	118 aa		4.16	□□□□□ -1.74
CTSB-223	ENST00000532370	KRTAP4-2	Q9BYR5	136 aa		4.15	□□□□□ -1.75
CTSB-223	ENST00000532370	LCE3D	Q9BYE3	92 aa		4.07	□□□□□ -1.76
CTSB-223	ENST00000532370	LCE1C	Q5T751	118 aa		4.06	□□□□□ -1.76
CTSB-223	ENST00000532370	NDUFAF8	A1L188	74 aa		3.99	□□□□□ -1.77
CTSB-223	ENST00000532370	LCE3E	Q5T5B0	92 aa		3.87	□□□□□ -1.79
CTSB-223	ENST00000532370	KRTAP4-12	Q9BQ66	201 aa		3.76	□□□□□ -1.81
CTSB-223	ENST00000532370	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.71	□□□□□ -1.82
CTSB-223	ENST00000532370	KRTAP5-11	Q6L8G4	156 aa		3.66	□□□□□ -1.82
CTSB-223	ENST00000532370		H3BS24	57 aa		3.65	□□□□□ -1.83
CTSB-223	ENST00000532370	LCE1F	Q5T754	118 aa		3.51	□□□□□ -1.85
CTSB-223	ENST00000532370	KRTAP21-2	Q3LI59	83 aa		3.47	□□□□□ -1.85
CTSB-223	ENST00000532370		A0A0A0MQY5	61 aa		3.36	□□□□□ -1.87
CTSB-223	ENST00000532370	INE1	O15225	51 aa		3.32	□□□□□ -1.88
CTSB-223	ENST00000532370	KRTAP4-4	Q9BYR3	166 aa		3.2	□□□□□ -1.9
CTSB-223	ENST00000532370	PHGR1	C9JFL3	82 aa		3.19	□□□□□ -1.9
CTSB-223	ENST00000532370	PRM1	P04553	51 aa		3.12	□□□□□ -1.91
CTSB-223	ENST00000532370	MUC19	Q7Z5P9	8384 aa		2.97	□□□□□ -1.93
CTSB-223	ENST00000532370	KRTAP21-1	Q3LI58	79 aa		2.48	□□□□□ -2.01
CTSB-223	ENST00000532370	MUC16	Q8WXI7	14507 aa		2.11	□□□□□ -2.07

Retrieved 78 of 20,778 RNA–protein pairs in 73.5 ms