RNA–Protein interactions for RNA: ENST00000531690.5

GMDS-209, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 515 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-209ENST00000531690 LCE3AQ5TA76 89 aa2.58□□□□□ -2
GMDS-209ENST00000531690 LUZP6Q538Z0 58 aa2.56□□□□□ -2
GMDS-209ENST00000531690 USH2AO75445 5202 aa2.55□□□□□ -2
GMDS-209ENST00000531690 KRTAP8-1Q8IUC2 63 aa2.54□□□□□ -2
GMDS-209ENST00000531690 KRTAP10-7P60409 375 aaPredicted RBP2.51□□□□□ -2.01
GMDS-209ENST00000531690 NDUFAF8A1L188 74 aa2.5□□□□□ -2.01
GMDS-209ENST00000531690 KRTAP12-3P60328 96 aa2.5□□□□□ -2.01
GMDS-209ENST00000531690 SSPOA2VEC9 5147 aa2.49□□□□□ -2.01
GMDS-209ENST00000531690 SPRR5A0A1B0GTR4 108 aa2.43□□□□□ -2.02
GMDS-209ENST00000531690 KRTAP19-6Q3LI70 58 aa2.43□□□□□ -2.02
GMDS-209ENST00000531690 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
GMDS-209ENST00000531690 KRTAP19-5Q3LI72 72 aa2.41□□□□□ -2.02
GMDS-209ENST00000531690 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
GMDS-209ENST00000531690 KMT2DO14686 5537 aa2.37□□□□□ -2.03
GMDS-209ENST00000531690 KRTAP19-7Q3SYF9 63 aa2.32□□□□□ -2.04
GMDS-209ENST00000531690 LCE3CQ5T5A8 94 aa2.32□□□□□ -2.04
GMDS-209ENST00000531690 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
GMDS-209ENST00000531690 FSIP2Q5CZC0 6907 aa2.3□□□□□ -2.04
GMDS-209ENST00000531690 MT1EP04732 61 aa2.3□□□□□ -2.04
GMDS-209ENST00000531690 FCGBPQ9Y6R7 5405 aaPredicted RBP2.28□□□□□ -2.04
GMDS-209ENST00000531690 MT1LQ93083 61 aa2.26□□□□□ -2.05
GMDS-209ENST00000531690 KRTAP19-3Q7Z4W3 81 aa2.21□□□□□ -2.06
GMDS-209ENST00000531690 SPRR2FQ96RM1 72 aa2.21□□□□□ -2.06
GMDS-209ENST00000531690 CRCT1Q9UGL9 99 aa2.21□□□□□ -2.06
GMDS-209ENST00000531690 MT1GP13640 62 aa2.2□□□□□ -2.06
GMDS-209ENST00000531690 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
GMDS-209ENST00000531690 MACF1Q9UPN3 7388 aaKnown RBP2.17□□□□□ -2.06
GMDS-209ENST00000531690 MT1MQ8N339 61 aa2.16□□□□□ -2.06
GMDS-209ENST00000531690 MUC12Q9UKN1 5478 aa2.14□□□□□ -2.07
GMDS-209ENST00000531690 SYNE2Q8WXH0 6885 aaKnown RBP2.14□□□□□ -2.07
GMDS-209ENST00000531690 KRTAP9-6A8MVA2 160 aa2.14□□□□□ -2.07
GMDS-209ENST00000531690 INE1O15225 51 aa2.12□□□□□ -2.07
GMDS-209ENST00000531690 KRTAP5-9P26371 169 aa2.11□□□□□ -2.07
GMDS-209ENST00000531690 SPRR2EP22531 72 aa2.08□□□□□ -2.08
GMDS-209ENST00000531690 SPRR2BP35325 72 aa2.08□□□□□ -2.08
GMDS-209ENST00000531690 SPRR2AP35326 72 aa2.08□□□□□ -2.08
GMDS-209ENST00000531690 MDN1Q9NU22 5596 aa2.08□□□□□ -2.08
GMDS-209ENST00000531690 KRTAP4-3Q9BYR4 195 aa2.07□□□□□ -2.08
GMDS-209ENST00000531690 KRTAP2-3P0C7H8 128 aa2.06□□□□□ -2.08
GMDS-209ENST00000531690 KRTAP2-4Q9BYR9 128 aa2.06□□□□□ -2.08
GMDS-209ENST00000531690 KRTAP2-1Q9BYU5 128 aa2.06□□□□□ -2.08
GMDS-209ENST00000531690 KRTAP6-3Q3LI67 103 aa2.04□□□□□ -2.08
GMDS-209ENST00000531690 LCE3EQ5T5B0 92 aa2.04□□□□□ -2.08
GMDS-209ENST00000531690 SPRR2DP22532 72 aa2.01□□□□□ -2.09
GMDS-209ENST00000531690 MT1AP04731 61 aa1.95□□□□□ -2.1
GMDS-209ENST00000531690 DSTQ03001 7570 aaKnown RBP1.94□□□□□ -2.1
GMDS-209ENST00000531690 NEBP20929 6669 aa1.94□□□□□ -2.1
GMDS-209ENST00000531690 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
GMDS-209ENST00000531690 KRTAP5-5Q701N2 237 aaPredicted RBP1.9□□□□□ -2.11
GMDS-209ENST00000531690 KRTAP6-1Q3LI64 71 aa1.89□□□□□ -2.11
GMDS-209ENST00000531690 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
GMDS-209ENST00000531690 SYNE1Q8NF91 8797 aaKnown RBP1.83□□□□□ -2.12
GMDS-209ENST00000531690 KRTAP5-4Q6L8H1 288 aa1.82□□□□□ -2.12
GMDS-209ENST00000531690 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
GMDS-209ENST00000531690 LCE3DQ9BYE3 92 aa1.78□□□□□ -2.12
GMDS-209ENST00000531690 KRTAP20-1Q3LI63 56 aa1.73□□□□□ -2.13
GMDS-209ENST00000531690 KRTAP6-2Q3LI66 62 aa1.73□□□□□ -2.13
GMDS-209ENST00000531690 MT4P47944 62 aa1.71□□□□□ -2.14
GMDS-209ENST00000531690 OBSCNQ5VST9 7968 aa1.67□□□□□ -2.14
GMDS-209ENST00000531690 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
GMDS-209ENST00000531690 KRTAP20-2Q3LI61 65 aa1.67□□□□□ -2.14
GMDS-209ENST00000531690 KRTAP5-2Q701N4 177 aa1.63□□□□□ -2.15
GMDS-209ENST00000531690 PRM1P04553 51 aa1.58□□□□□ -2.16
GMDS-209ENST00000531690 LCE1CQ5T751 118 aa1.58□□□□□ -2.16
GMDS-209ENST00000531690 LCE1BQ5T7P3 118 aa1.58□□□□□ -2.16
GMDS-209ENST00000531690 GPR98Q8WXG9 6306 aa1.51□□□□□ -2.17
GMDS-209ENST00000531690 AHNAK2Q8IVF2 5795 aa1.44□□□□□ -2.18
GMDS-209ENST00000531690 MUC5ACP98088 5654 aa1.43□□□□□ -2.18
GMDS-209ENST00000531690 KRTAP5-10Q6L8G5 202 aa1.39□□□□□ -2.19
GMDS-209ENST00000531690 KRTAP5-8O75690 187 aa1.36□□□□□ -2.19
GMDS-209ENST00000531690 KRTAP5-7Q6L8G8 165 aa1.33□□□□□ -2.2
GMDS-209ENST00000531690 MUC5BQ9HC84 5762 aaPredicted RBP1.27□□□□□ -2.21
GMDS-209ENST00000531690 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
GMDS-209ENST00000531690 MUC19Q7Z5P9 8384 aa1.22□□□□□ -2.21
GMDS-209ENST00000531690 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
GMDS-209ENST00000531690 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
GMDS-209ENST00000531690 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
GMDS-209ENST00000531690 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 91.4 ms