RNA–Protein interactions for RNA: ENST00000531196.5

FGFR1-236, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-236ENST00000531196 TNP1P09430 55 aa3.89□□□□□ -1.79
FGFR1-236ENST00000531196 Q1T7F1 81 aa3.89□□□□□ -1.79
FGFR1-236ENST00000531196 MT1MQ8N339 61 aa3.88□□□□□ -1.79
FGFR1-236ENST00000531196 MT1LQ93083 61 aa3.88□□□□□ -1.79
FGFR1-236ENST00000531196 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
FGFR1-236ENST00000531196 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
FGFR1-236ENST00000531196 MIR22HGQ0VDD5 57 aa3.86□□□□□ -1.79
FGFR1-236ENST00000531196 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
FGFR1-236ENST00000531196 C10orf95Q9H7T3 257 aa3.86□□□□□ -1.79
FGFR1-236ENST00000531196 K7ERS5 55 aa3.85□□□□□ -1.79
FGFR1-236ENST00000531196 PSPHP1O15172 72 aa3.85□□□□□ -1.79
FGFR1-236ENST00000531196 MT4P47944 62 aa3.84□□□□□ -1.79
FGFR1-236ENST00000531196 LCE4AQ5TA78 99 aa3.84□□□□□ -1.79
FGFR1-236ENST00000531196 RPS28P62857 69 aaKnown RBP3.83□□□□□ -1.8
FGFR1-236ENST00000531196 KRTAP4-3Q9BYR4 195 aa3.8□□□□□ -1.8
FGFR1-236ENST00000531196 A6NED7 52 aa3.78□□□□□ -1.8
FGFR1-236ENST00000531196 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
FGFR1-236ENST00000531196 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
FGFR1-236ENST00000531196 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
FGFR1-236ENST00000531196 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
FGFR1-236ENST00000531196 KRTAP4-6Q9BYQ5 205 aa3.68□□□□□ -1.82
FGFR1-236ENST00000531196 KRTAP4-7Q9BYR0 210 aa3.68□□□□□ -1.82
FGFR1-236ENST00000531196 KRTAP25-1Q3LHN0 102 aa3.65□□□□□ -1.83
FGFR1-236ENST00000531196 CDC42SE1Q9NRR8 79 aa3.62□□□□□ -1.83
FGFR1-236ENST00000531196 KRTAP5-10Q6L8G5 202 aa3.6□□□□□ -1.83
FGFR1-236ENST00000531196 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
FGFR1-236ENST00000531196 KRTAP20-2Q3LI61 65 aa3.54□□□□□ -1.84
FGFR1-236ENST00000531196 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
FGFR1-236ENST00000531196 ROMO1P60602 79 aa3.53□□□□□ -1.84
FGFR1-236ENST00000531196 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
FGFR1-236ENST00000531196 KRTAP5-3Q6L8H2 238 aa3.52□□□□□ -1.85
FGFR1-236ENST00000531196 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
FGFR1-236ENST00000531196 LOC100996750A0A140TA64 210 aa3.49□□□□□ -1.85
FGFR1-236ENST00000531196 KRTAP5-7Q6L8G8 165 aa3.48□□□□□ -1.85
FGFR1-236ENST00000531196 KRTAP19-4Q3LI73 84 aa3.47□□□□□ -1.85
FGFR1-236ENST00000531196 SYNE1Q8NF91 8797 aaKnown RBP3.46□□□□□ -1.86
FGFR1-236ENST00000531196 KRTAP15-1Q3LI76 137 aa3.45□□□□□ -1.86
FGFR1-236ENST00000531196 BRK1Q8WUW1 75 aa3.43□□□□□ -1.86
FGFR1-236ENST00000531196 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
FGFR1-236ENST00000531196 MT1AP04731 61 aa3.3□□□□□ -1.88
FGFR1-236ENST00000531196 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
FGFR1-236ENST00000531196 KRTAP4-11Q9BYQ6 195 aa3.25□□□□□ -1.89
FGFR1-236ENST00000531196 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
FGFR1-236ENST00000531196 PMAIP1Q13794 54 aa3.23□□□□□ -1.89
FGFR1-236ENST00000531196 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
FGFR1-236ENST00000531196 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
FGFR1-236ENST00000531196 KRTAP9-4Q9BYQ2 154 aa3.18□□□□□ -1.9
FGFR1-236ENST00000531196 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
FGFR1-236ENST00000531196 KRTAP6-2Q3LI66 62 aa3.16□□□□□ -1.9
FGFR1-236ENST00000531196 PRO0628Q9UI54 55 aa3.14□□□□□ -1.91
FGFR1-236ENST00000531196 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
FGFR1-236ENST00000531196 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
FGFR1-236ENST00000531196 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
FGFR1-236ENST00000531196 MT3P25713 68 aa3.04□□□□□ -1.92
FGFR1-236ENST00000531196 PRAC1Q96KF2 57 aa3.03□□□□□ -1.92
FGFR1-236ENST00000531196 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
FGFR1-236ENST00000531196 KTN1-AS1Q86SY8 53 aa2.98□□□□□ -1.93
FGFR1-236ENST00000531196 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
FGFR1-236ENST00000531196 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
FGFR1-236ENST00000531196 NDUFAF8A1L188 74 aa2.71□□□□□ -1.98
FGFR1-236ENST00000531196 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
FGFR1-236ENST00000531196 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
FGFR1-236ENST00000531196 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
FGFR1-236ENST00000531196 LCE1CQ5T751 118 aa2.57□□□□□ -2
FGFR1-236ENST00000531196 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
FGFR1-236ENST00000531196 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
FGFR1-236ENST00000531196 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
FGFR1-236ENST00000531196 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
FGFR1-236ENST00000531196 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
FGFR1-236ENST00000531196 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
FGFR1-236ENST00000531196 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
FGFR1-236ENST00000531196 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
FGFR1-236ENST00000531196 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
FGFR1-236ENST00000531196 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
FGFR1-236ENST00000531196 INE1O15225 51 aa1.87□□□□□ -2.11
FGFR1-236ENST00000531196 PRM1P04553 51 aa1.79□□□□□ -2.12
FGFR1-236ENST00000531196 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
FGFR1-236ENST00000531196 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 2379.8 ms