RNA–Protein interactions for RNA: ENST00000531173.1

GSDMD-210, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-210ENST00000531173 MT1EP04732 61 aa6.22□□□□□ -1.41
GSDMD-210ENST00000531173 GPR98Q8WXG9 6306 aa6.21□□□□□ -1.41
GSDMD-210ENST00000531173 PRO0628Q9UI54 55 aa6.2□□□□□ -1.42
GSDMD-210ENST00000531173 TNP1P09430 55 aa6.19□□□□□ -1.42
GSDMD-210ENST00000531173 ROMO1P60602 79 aa6.19□□□□□ -1.42
GSDMD-210ENST00000531173 KRTAP19-3Q7Z4W3 81 aa6.18□□□□□ -1.42
GSDMD-210ENST00000531173 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
GSDMD-210ENST00000531173 PMAIP1Q13794 54 aa6.1□□□□□ -1.43
GSDMD-210ENST00000531173 KRTAP19-5Q3LI72 72 aa6.05□□□□□ -1.44
GSDMD-210ENST00000531173 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
GSDMD-210ENST00000531173 MT1GP13640 62 aa6.01□□□□□ -1.45
GSDMD-210ENST00000531173 KRTAP23-1A1A580 65 aa5.97□□□□□ -1.45
GSDMD-210ENST00000531173 LCE3AQ5TA76 89 aa5.97□□□□□ -1.45
GSDMD-210ENST00000531173 HMCN1Q96RW7 5635 aa5.94□□□□□ -1.46
GSDMD-210ENST00000531173 MT1MQ8N339 61 aa5.93□□□□□ -1.46
GSDMD-210ENST00000531173 MT1LQ93083 61 aa5.92□□□□□ -1.46
GSDMD-210ENST00000531173 LCE1DQ5T752 114 aa5.91□□□□□ -1.46
GSDMD-210ENST00000531173 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
GSDMD-210ENST00000531173 LCE4AQ5TA78 99 aa5.84□□□□□ -1.47
GSDMD-210ENST00000531173 KRTAP4-3Q9BYR4 195 aa5.8□□□□□ -1.48
GSDMD-210ENST00000531173 KRTAP5-4Q6L8H1 288 aa5.79□□□□□ -1.48
GSDMD-210ENST00000531173 KTN1-AS1Q86SY8 53 aa5.79□□□□□ -1.48
GSDMD-210ENST00000531173 MT4P47944 62 aa5.78□□□□□ -1.48
GSDMD-210ENST00000531173 AHNAK2Q8IVF2 5795 aa5.78□□□□□ -1.48
GSDMD-210ENST00000531173 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
GSDMD-210ENST00000531173 PRAC1Q96KF2 57 aa5.72□□□□□ -1.49
GSDMD-210ENST00000531173 KRTAP4-6Q9BYQ5 205 aa5.67□□□□□ -1.5
GSDMD-210ENST00000531173 KRTAP5-10Q6L8G5 202 aa5.63□□□□□ -1.51
GSDMD-210ENST00000531173 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
GSDMD-210ENST00000531173 KRTAP15-1Q3LI76 137 aa5.56□□□□□ -1.52
GSDMD-210ENST00000531173 KRTAP5-5Q701N2 237 aaPredicted RBP5.51□□□□□ -1.53
GSDMD-210ENST00000531173 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
GSDMD-210ENST00000531173 KRTAP5-7Q6L8G8 165 aa5.44□□□□□ -1.54
GSDMD-210ENST00000531173 KRTAP20-2Q3LI61 65 aa5.43□□□□□ -1.54
GSDMD-210ENST00000531173 KRTAP5-3Q6L8H2 238 aa5.42□□□□□ -1.54
GSDMD-210ENST00000531173 SVIPQ8NHG7 77 aa5.4□□□□□ -1.54
GSDMD-210ENST00000531173 SPRR5A0A1B0GTR4 108 aa5.39□□□□□ -1.55
GSDMD-210ENST00000531173 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
GSDMD-210ENST00000531173 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
GSDMD-210ENST00000531173 SYNE1Q8NF91 8797 aaKnown RBP5.32□□□□□ -1.56
GSDMD-210ENST00000531173 KRTAP12-4P60329 112 aa5.29□□□□□ -1.56
GSDMD-210ENST00000531173 KRTAP9-6A8MVA2 160 aa5.05□□□□□ -1.6
GSDMD-210ENST00000531173 KRTAP5-2Q701N4 177 aa5.05□□□□□ -1.6
GSDMD-210ENST00000531173 MT1AP04731 61 aa5.02□□□□□ -1.61
GSDMD-210ENST00000531173 KRTAP6-1Q3LI64 71 aa5.02□□□□□ -1.61
GSDMD-210ENST00000531173 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
GSDMD-210ENST00000531173 KRTAP5-8O75690 187 aa4.86□□□□□ -1.63
GSDMD-210ENST00000531173 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
GSDMD-210ENST00000531173 AHNAKQ09666 5890 aaKnown RBP4.81□□□□□ -1.64
GSDMD-210ENST00000531173 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
GSDMD-210ENST00000531173 MUC5BQ9HC84 5762 aaPredicted RBP4.8□□□□□ -1.64
GSDMD-210ENST00000531173 MUC5ACP98088 5654 aa4.77□□□□□ -1.65
GSDMD-210ENST00000531173 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
GSDMD-210ENST00000531173 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
GSDMD-210ENST00000531173 MT3P25713 68 aa4.57□□□□□ -1.68
GSDMD-210ENST00000531173 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
GSDMD-210ENST00000531173 KRTAP5-1Q6L8H4 278 aa4.55□□□□□ -1.68
GSDMD-210ENST00000531173 NDUFAF8A1L188 74 aa4.39□□□□□ -1.71
GSDMD-210ENST00000531173 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
GSDMD-210ENST00000531173 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
GSDMD-210ENST00000531173 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
GSDMD-210ENST00000531173 LCE1BQ5T7P3 118 aa3.98□□□□□ -1.77
GSDMD-210ENST00000531173 LCE3DQ9BYE3 92 aa3.97□□□□□ -1.77
GSDMD-210ENST00000531173 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
GSDMD-210ENST00000531173 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
GSDMD-210ENST00000531173 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
GSDMD-210ENST00000531173 INE1O15225 51 aa3.67□□□□□ -1.82
GSDMD-210ENST00000531173 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
GSDMD-210ENST00000531173 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
GSDMD-210ENST00000531173 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
GSDMD-210ENST00000531173 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
GSDMD-210ENST00000531173 H3BS24 57 aa3.31□□□□□ -1.88
GSDMD-210ENST00000531173 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
GSDMD-210ENST00000531173 PRM1P04553 51 aa3.2□□□□□ -1.9
GSDMD-210ENST00000531173 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
GSDMD-210ENST00000531173 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
GSDMD-210ENST00000531173 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
GSDMD-210ENST00000531173 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 96.1 ms