RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 PRR15LQ9BU68 103 aa7.21□□□□□ -1.26
SMPD1-204ENST00000530395 KRTAP5-4Q6L8H1 288 aa7.2□□□□□ -1.26
SMPD1-204ENST00000530395 ANAPC13Q9BS18 74 aa7.17□□□□□ -1.26
SMPD1-204ENST00000530395 KRTAP4-6Q9BYQ5 205 aa7.09□□□□□ -1.27
SMPD1-204ENST00000530395 ATP5EP56381 51 aaPredicted RBP7.07□□□□□ -1.28
SMPD1-204ENST00000530395 KRTAP12-3P60328 96 aa7.07□□□□□ -1.28
SMPD1-204ENST00000530395 LINC01558Q9Y6Z2 57 aa7.02□□□□□ -1.29
SMPD1-204ENST00000530395 CCDC179H3BU77 68 aa7.01□□□□□ -1.29
SMPD1-204ENST00000530395 KRTAP5-10Q6L8G5 202 aa7.01□□□□□ -1.29
SMPD1-204ENST00000530395 KRTAP4-7Q9BYR0 210 aa7.01□□□□□ -1.29
SMPD1-204ENST00000530395 UQCR11O14957 56 aa6.93□□□□□ -1.3
SMPD1-204ENST00000530395 KRTAP25-1Q3LHN0 102 aa6.83□□□□□ -1.32
SMPD1-204ENST00000530395 KRTAP20-2Q3LI61 65 aa6.83□□□□□ -1.32
SMPD1-204ENST00000530395 KRTAP5-5Q701N2 237 aaPredicted RBP6.83□□□□□ -1.32
SMPD1-204ENST00000530395 KRTAP5-3Q6L8H2 238 aa6.81□□□□□ -1.32
SMPD1-204ENST00000530395 SPRR5A0A1B0GTR4 108 aa6.79□□□□□ -1.32
SMPD1-204ENST00000530395 KRTAP5-7Q6L8G8 165 aa6.78□□□□□ -1.32
SMPD1-204ENST00000530395 TMEM258P61165 79 aa6.77□□□□□ -1.33
SMPD1-204ENST00000530395 KRTAP12-4P60329 112 aa6.76□□□□□ -1.33
SMPD1-204ENST00000530395 MIR22HGQ0VDD5 57 aa6.74□□□□□ -1.33
SMPD1-204ENST00000530395 K7ERS5 55 aa6.71□□□□□ -1.34
SMPD1-204ENST00000530395 KRTAP19-4Q3LI73 84 aa6.69□□□□□ -1.34
SMPD1-204ENST00000530395 SYNE1Q8NF91 8797 aaKnown RBP6.68□□□□□ -1.34
SMPD1-204ENST00000530395 LOC100996750A0A140TA64 210 aa6.66□□□□□ -1.34
SMPD1-204ENST00000530395 KRTAP23-1A1A580 65 aa6.55□□□□□ -1.36
SMPD1-204ENST00000530395 KRTAP15-1Q3LI76 137 aa6.53□□□□□ -1.36
SMPD1-204ENST00000530395 V9GYY9 64 aa6.49□□□□□ -1.37
SMPD1-204ENST00000530395 LCE3CQ5T5A8 94 aa6.48□□□□□ -1.37
SMPD1-204ENST00000530395 PSPHP1O15172 72 aa6.47□□□□□ -1.37
SMPD1-204ENST00000530395 Q1T7F1 81 aa6.38□□□□□ -1.39
SMPD1-204ENST00000530395 MT1AP04731 61 aa6.32□□□□□ -1.4
SMPD1-204ENST00000530395 CDC42SE1Q9NRR8 79 aa6.3□□□□□ -1.4
SMPD1-204ENST00000530395 KRTAP5-2Q701N4 177 aa6.28□□□□□ -1.4
SMPD1-204ENST00000530395 KRTAP4-11Q9BYQ6 195 aa6.28□□□□□ -1.4
SMPD1-204ENST00000530395 A6NED7 52 aa6.27□□□□□ -1.41
SMPD1-204ENST00000530395 KRTAP6-1Q3LI64 71 aa6.27□□□□□ -1.41
SMPD1-204ENST00000530395 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
SMPD1-204ENST00000530395 ROMO1P60602 79 aa6.17□□□□□ -1.42
SMPD1-204ENST00000530395 KRTAP9-4Q9BYQ2 154 aa6.12□□□□□ -1.43
SMPD1-204ENST00000530395 KRTAP9-6A8MVA2 160 aa6.07□□□□□ -1.44
SMPD1-204ENST00000530395 KRTAP5-8O75690 187 aa6.06□□□□□ -1.44
SMPD1-204ENST00000530395 PCP4P48539 62 aa6.05□□□□□ -1.44
SMPD1-204ENST00000530395 KRTAP6-2Q3LI66 62 aa6.05□□□□□ -1.44
SMPD1-204ENST00000530395 AHNAKQ09666 5890 aaKnown RBP6.02□□□□□ -1.45
SMPD1-204ENST00000530395 MUC5ACP98088 5654 aa5.98□□□□□ -1.45
SMPD1-204ENST00000530395 MUC5BQ9HC84 5762 aaPredicted RBP5.97□□□□□ -1.45
SMPD1-204ENST00000530395 OBSCNQ5VST9 7968 aa5.97□□□□□ -1.45
SMPD1-204ENST00000530395 KRTAP9-9Q9BYP9 154 aa5.83□□□□□ -1.48
SMPD1-204ENST00000530395 MT3P25713 68 aa5.8□□□□□ -1.48
SMPD1-204ENST00000530395 KRTAP5-1Q6L8H4 278 aa5.65□□□□□ -1.5
SMPD1-204ENST00000530395 LCE1EQ5T753 118 aa5.37□□□□□ -1.55
SMPD1-204ENST00000530395 LCE1BQ5T7P3 118 aa5.08□□□□□ -1.6
SMPD1-204ENST00000530395 BRK1Q8WUW1 75 aa5.08□□□□□ -1.6
SMPD1-204ENST00000530395 KRTAP4-2Q9BYR5 136 aa5.06□□□□□ -1.6
SMPD1-204ENST00000530395 LCE1CQ5T751 118 aa4.98□□□□□ -1.61
SMPD1-204ENST00000530395 PRO0628Q9UI54 55 aa4.94□□□□□ -1.62
SMPD1-204ENST00000530395 PMAIP1Q13794 54 aa4.75□□□□□ -1.65
SMPD1-204ENST00000530395 KRTAP4-12Q9BQ66 201 aa4.67□□□□□ -1.66
SMPD1-204ENST00000530395 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
SMPD1-204ENST00000530395 SVIPQ8NHG7 77 aa4.63□□□□□ -1.67
SMPD1-204ENST00000530395 PRAC1Q96KF2 57 aa4.63□□□□□ -1.67
SMPD1-204ENST00000530395 KTN1-AS1Q86SY8 53 aa4.56□□□□□ -1.68
SMPD1-204ENST00000530395 KRTAP5-11Q6L8G4 156 aa4.53□□□□□ -1.68
SMPD1-204ENST00000530395 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.51□□□□□ -1.69
SMPD1-204ENST00000530395 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
SMPD1-204ENST00000530395 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
SMPD1-204ENST00000530395 KRTAP21-2Q3LI59 83 aa4.13□□□□□ -1.75
SMPD1-204ENST00000530395 PHGR1C9JFL3 82 aa4.12□□□□□ -1.75
SMPD1-204ENST00000530395 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
SMPD1-204ENST00000530395 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
SMPD1-204ENST00000530395 MUC19Q7Z5P9 8384 aa3.71□□□□□ -1.82
SMPD1-204ENST00000530395 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
SMPD1-204ENST00000530395 A0A0A0MQY5 61 aa3.25□□□□□ -1.89
SMPD1-204ENST00000530395 H3BS24 57 aa3.16□□□□□ -1.9
SMPD1-204ENST00000530395 KRTAP21-1Q3LI58 79 aa3.14□□□□□ -1.91
SMPD1-204ENST00000530395 PRM1P04553 51 aa3.13□□□□□ -1.91
SMPD1-204ENST00000530395 INE1O15225 51 aa3.04□□□□□ -1.92
SMPD1-204ENST00000530395 MUC16Q8WXI7 14507 aa2.61□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 142.3 ms