RNA–Protein interactions for RNA: ENST00000529677.1

PACS1-208, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-208ENST00000529677 TNP1P09430 55 aa6.54□□□□□ -1.36
PACS1-208ENST00000529677 KRTAP25-1Q3LHN0 102 aa6.47□□□□□ -1.37
PACS1-208ENST00000529677 ROMO1P60602 79 aa6.45□□□□□ -1.38
PACS1-208ENST00000529677 HMCN1Q96RW7 5635 aa6.39□□□□□ -1.39
PACS1-208ENST00000529677 AHNAK2Q8IVF2 5795 aa6.37□□□□□ -1.39
PACS1-208ENST00000529677 LCE3AQ5TA76 89 aa6.35□□□□□ -1.39
PACS1-208ENST00000529677 LCE1DQ5T752 114 aa6.33□□□□□ -1.4
PACS1-208ENST00000529677 KRTAP5-10Q6L8G5 202 aa6.31□□□□□ -1.4
PACS1-208ENST00000529677 KRTAP23-1A1A580 65 aa6.29□□□□□ -1.4
PACS1-208ENST00000529677 KRTAP19-7Q3SYF9 63 aa6.29□□□□□ -1.4
PACS1-208ENST00000529677 PRO0628Q9UI54 55 aa6.27□□□□□ -1.41
PACS1-208ENST00000529677 KRTAP19-5Q3LI72 72 aa6.23□□□□□ -1.41
PACS1-208ENST00000529677 PMAIP1Q13794 54 aa6.21□□□□□ -1.42
PACS1-208ENST00000529677 MT1EP04732 61 aa6.2□□□□□ -1.42
PACS1-208ENST00000529677 PP632Q6XCG6 107 aa6.15□□□□□ -1.42
PACS1-208ENST00000529677 KRTAP5-7Q6L8G8 165 aa6.14□□□□□ -1.43
PACS1-208ENST00000529677 MT4P47944 62 aa6.11□□□□□ -1.43
PACS1-208ENST00000529677 KRTAP12-3P60328 96 aa6.11□□□□□ -1.43
PACS1-208ENST00000529677 LCE5AQ5TCM9 118 aa6.1□□□□□ -1.43
PACS1-208ENST00000529677 KRTAP19-3Q7Z4W3 81 aa6.02□□□□□ -1.45
PACS1-208ENST00000529677 LCE4AQ5TA78 99 aa6.01□□□□□ -1.45
PACS1-208ENST00000529677 MT1LQ93083 61 aa6.01□□□□□ -1.45
PACS1-208ENST00000529677 MT1GP13640 62 aa5.95□□□□□ -1.46
PACS1-208ENST00000529677 KRTAP5-3Q6L8H2 238 aa5.95□□□□□ -1.46
PACS1-208ENST00000529677 KRTAP4-6Q9BYQ5 205 aa5.92□□□□□ -1.46
PACS1-208ENST00000529677 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
PACS1-208ENST00000529677 SPRR5A0A1B0GTR4 108 aa5.87□□□□□ -1.47
PACS1-208ENST00000529677 KRTAP19-4Q3LI73 84 aa5.87□□□□□ -1.47
PACS1-208ENST00000529677 KRTAP5-4Q6L8H1 288 aa5.86□□□□□ -1.47
PACS1-208ENST00000529677 KTN1-AS1Q86SY8 53 aa5.86□□□□□ -1.47
PACS1-208ENST00000529677 MT1MQ8N339 61 aa5.86□□□□□ -1.47
PACS1-208ENST00000529677 PRAC1Q96KF2 57 aa5.86□□□□□ -1.47
PACS1-208ENST00000529677 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
PACS1-208ENST00000529677 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
PACS1-208ENST00000529677 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
PACS1-208ENST00000529677 KRTAP20-2Q3LI61 65 aa5.56□□□□□ -1.52
PACS1-208ENST00000529677 AHNAKQ09666 5890 aaKnown RBP5.46□□□□□ -1.53
PACS1-208ENST00000529677 SVIPQ8NHG7 77 aa5.46□□□□□ -1.54
PACS1-208ENST00000529677 MUC5ACP98088 5654 aa5.41□□□□□ -1.54
PACS1-208ENST00000529677 KRTAP9-6A8MVA2 160 aa5.38□□□□□ -1.55
PACS1-208ENST00000529677 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
PACS1-208ENST00000529677 KRTAP5-5Q701N2 237 aaPredicted RBP5.36□□□□□ -1.55
PACS1-208ENST00000529677 MUC5BQ9HC84 5762 aaPredicted RBP5.35□□□□□ -1.55
PACS1-208ENST00000529677 SYNE1Q8NF91 8797 aaKnown RBP5.3□□□□□ -1.56
PACS1-208ENST00000529677 KRTAP4-11Q9BYQ6 195 aa5.25□□□□□ -1.57
PACS1-208ENST00000529677 KRTAP5-8O75690 187 aa5.19□□□□□ -1.58
PACS1-208ENST00000529677 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
PACS1-208ENST00000529677 MT1AP04731 61 aa5.13□□□□□ -1.59
PACS1-208ENST00000529677 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
PACS1-208ENST00000529677 KRTAP5-2Q701N4 177 aa5.01□□□□□ -1.61
PACS1-208ENST00000529677 OBSCNQ5VST9 7968 aa4.93□□□□□ -1.62
PACS1-208ENST00000529677 KRTAP9-9Q9BYP9 154 aa4.89□□□□□ -1.63
PACS1-208ENST00000529677 KRTAP9-4Q9BYQ2 154 aa4.88□□□□□ -1.63
PACS1-208ENST00000529677 LUZP6Q538Z0 58 aa4.82□□□□□ -1.64
PACS1-208ENST00000529677 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
PACS1-208ENST00000529677 MT3P25713 68 aa4.65□□□□□ -1.67
PACS1-208ENST00000529677 KRTAP5-1Q6L8H4 278 aa4.65□□□□□ -1.67
PACS1-208ENST00000529677 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
PACS1-208ENST00000529677 LCE3DQ9BYE3 92 aa4.19□□□□□ -1.74
PACS1-208ENST00000529677 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
PACS1-208ENST00000529677 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
PACS1-208ENST00000529677 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
PACS1-208ENST00000529677 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.79
PACS1-208ENST00000529677 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
PACS1-208ENST00000529677 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
PACS1-208ENST00000529677 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
PACS1-208ENST00000529677 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
PACS1-208ENST00000529677 INE1O15225 51 aa3.69□□□□□ -1.82
PACS1-208ENST00000529677 PHGR1C9JFL3 82 aa3.66□□□□□ -1.82
PACS1-208ENST00000529677 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
PACS1-208ENST00000529677 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
PACS1-208ENST00000529677 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
PACS1-208ENST00000529677 PRM1P04553 51 aa3.31□□□□□ -1.88
PACS1-208ENST00000529677 H3BS24 57 aa3.12□□□□□ -1.91
PACS1-208ENST00000529677 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
PACS1-208ENST00000529677 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
PACS1-208ENST00000529677 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
PACS1-208ENST00000529677 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 72.1 ms