RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
SF3B2-206ENST00000528302 KRTAP19-7Q3SYF9 63 aa3.42□□□□□ -1.86
SF3B2-206ENST00000528302 SYNE1Q8NF91 8797 aaKnown RBP3.4□□□□□ -1.86
SF3B2-206ENST00000528302 LOC100996750A0A140TA64 210 aa3.39□□□□□ -1.87
SF3B2-206ENST00000528302 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
SF3B2-206ENST00000528302 KRTAP19-4Q3LI73 84 aa3.39□□□□□ -1.87
SF3B2-206ENST00000528302 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
SF3B2-206ENST00000528302 LCE1AQ5T7P2 110 aa3.35□□□□□ -1.87
SF3B2-206ENST00000528302 MT1LQ93083 61 aa3.33□□□□□ -1.88
SF3B2-206ENST00000528302 SYNE2Q8WXH0 6885 aaKnown RBP3.32□□□□□ -1.88
SF3B2-206ENST00000528302 MACF1Q9UPN3 7388 aaKnown RBP3.31□□□□□ -1.88
SF3B2-206ENST00000528302 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
SF3B2-206ENST00000528302 MT1EP04732 61 aa3.3□□□□□ -1.88
SF3B2-206ENST00000528302 MT1GP13640 62 aa3.3□□□□□ -1.88
SF3B2-206ENST00000528302 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
SF3B2-206ENST00000528302 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
SF3B2-206ENST00000528302 KRTAP2-1Q9BYU5 128 aa3.29□□□□□ -1.88
SF3B2-206ENST00000528302 KRTAP6-3Q3LI67 103 aa3.24□□□□□ -1.89
SF3B2-206ENST00000528302 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
SF3B2-206ENST00000528302 MDN1Q9NU22 5596 aa3.22□□□□□ -1.89
SF3B2-206ENST00000528302 KRTAP19-6Q3LI70 58 aa3.2□□□□□ -1.9
SF3B2-206ENST00000528302 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
SF3B2-206ENST00000528302 LCE1DQ5T752 114 aa3.17□□□□□ -1.9
SF3B2-206ENST00000528302 SPRR2FQ96RM1 72 aa3.16□□□□□ -1.9
SF3B2-206ENST00000528302 KRTAP4-9Q9BYQ8 210 aa3.15□□□□□ -1.9
SF3B2-206ENST00000528302 LCE3BQ5TA77 95 aa3.13□□□□□ -1.91
SF3B2-206ENST00000528302 KRTAP9-6A0A140TA67 174 aa3.11□□□□□ -1.91
SF3B2-206ENST00000528302 KRTAP9-7A8MTY7 169 aa3.11□□□□□ -1.91
SF3B2-206ENST00000528302 MT1MQ8N339 61 aa3.09□□□□□ -1.91
SF3B2-206ENST00000528302 KRTAP9-2Q9BYQ4 174 aa3.08□□□□□ -1.92
SF3B2-206ENST00000528302 LCE4AQ5TA78 99 aa3.07□□□□□ -1.92
SF3B2-206ENST00000528302 KRTAP19-3Q7Z4W3 81 aa3.06□□□□□ -1.92
SF3B2-206ENST00000528302 MT3P25713 68 aa3.05□□□□□ -1.92
SF3B2-206ENST00000528302 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
SF3B2-206ENST00000528302 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
SF3B2-206ENST00000528302 SPRR2EP22531 72 aa2.87□□□□□ -1.95
SF3B2-206ENST00000528302 SPRR2BP35325 72 aa2.87□□□□□ -1.95
SF3B2-206ENST00000528302 SPRR2AP35326 72 aa2.87□□□□□ -1.95
SF3B2-206ENST00000528302 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
SF3B2-206ENST00000528302 PRM1P04553 51 aa2.83□□□□□ -1.96
SF3B2-206ENST00000528302 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
SF3B2-206ENST00000528302 SPRR2DP22532 72 aa2.73□□□□□ -1.97
SF3B2-206ENST00000528302 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.73□□□□□ -1.97
SF3B2-206ENST00000528302 MT1AP04731 61 aa2.72□□□□□ -1.97
SF3B2-206ENST00000528302 KRTAP5-9P26371 169 aa2.68□□□□□ -1.98
SF3B2-206ENST00000528302 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
SF3B2-206ENST00000528302 MT4P47944 62 aa2.56□□□□□ -2
SF3B2-206ENST00000528302 NEBP20929 6669 aa2.56□□□□□ -2
SF3B2-206ENST00000528302 KRTAP4-6Q9BYQ5 205 aa2.48□□□□□ -2.01
SF3B2-206ENST00000528302 HMCN1Q96RW7 5635 aa2.45□□□□□ -2.02
SF3B2-206ENST00000528302 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.04
SF3B2-206ENST00000528302 KRTAP20-2Q3LI61 65 aa2.27□□□□□ -2.05
SF3B2-206ENST00000528302 KRTAP20-1Q3LI63 56 aa2.27□□□□□ -2.05
SF3B2-206ENST00000528302 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
SF3B2-206ENST00000528302 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
SF3B2-206ENST00000528302 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
SF3B2-206ENST00000528302 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
SF3B2-206ENST00000528302 KRTAP4-11Q9BYQ6 195 aa2.2□□□□□ -2.06
SF3B2-206ENST00000528302 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
SF3B2-206ENST00000528302 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
SF3B2-206ENST00000528302 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
SF3B2-206ENST00000528302 KRTAP5-3Q6L8H2 238 aa2.09□□□□□ -2.07
SF3B2-206ENST00000528302 AHNAK2Q8IVF2 5795 aa2.01□□□□□ -2.09
SF3B2-206ENST00000528302 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
SF3B2-206ENST00000528302 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
SF3B2-206ENST00000528302 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
SF3B2-206ENST00000528302 KRTAP4-2Q9BYR5 136 aa1.9□□□□□ -2.1
SF3B2-206ENST00000528302 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
SF3B2-206ENST00000528302 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
SF3B2-206ENST00000528302 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
SF3B2-206ENST00000528302 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
SF3B2-206ENST00000528302 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
SF3B2-206ENST00000528302 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
SF3B2-206ENST00000528302 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
SF3B2-206ENST00000528302 KRTAP5-11Q6L8G4 156 aa1.54□□□□□ -2.16
SF3B2-206ENST00000528302 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
SF3B2-206ENST00000528302 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 113.4 ms