RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 KRTAP10-10P60014 251 aa2.1□□□□□ -2.07
CHD7-205ENST00000527825 H1FX-AS1Q4G0G2 97 aa2.09□□□□□ -2.07
CHD7-205ENST00000527825 KRTAP5-9P26371 169 aa2.08□□□□□ -2.08
CHD7-205ENST00000527825 A0A1B0GU33 70 aa2.07□□□□□ -2.08
CHD7-205ENST00000527825 MT2AP02795 61 aa2.07□□□□□ -2.08
CHD7-205ENST00000527825 RPS29P62273 56 aaKnown RBP2.07□□□□□ -2.08
CHD7-205ENST00000527825 CAMK2N1Q7Z7J9 78 aa2.07□□□□□ -2.08
CHD7-205ENST00000527825 MT1FP04733 61 aa2.05□□□□□ -2.08
CHD7-205ENST00000527825 KMT2DO14686 5537 aa2.04□□□□□ -2.08
CHD7-205ENST00000527825 RPL37P61927 97 aaKnown RBP2.04□□□□□ -2.08
CHD7-205ENST00000527825 LCE3CQ5T5A8 94 aa2.04□□□□□ -2.08
CHD7-205ENST00000527825 KRTAP2-1Q9BYU5 128 aa2.03□□□□□ -2.08
CHD7-205ENST00000527825 GPR98Q8WXG9 6306 aa2.03□□□□□ -2.09
CHD7-205ENST00000527825 MDN1Q9NU22 5596 aa2.01□□□□□ -2.09
CHD7-205ENST00000527825 CRIPTQ9P021 101 aa1.99□□□□□ -2.09
CHD7-205ENST00000527825 KRTAP13-4Q3LI77 160 aa1.98□□□□□ -2.09
CHD7-205ENST00000527825 SPRR2EP22531 72 aa1.97□□□□□ -2.09
CHD7-205ENST00000527825 SPRR2BP35325 72 aa1.97□□□□□ -2.09
CHD7-205ENST00000527825 SPRR2AP35326 72 aa1.97□□□□□ -2.09
CHD7-205ENST00000527825 S4R3F8 94 aa1.94□□□□□ -2.1
CHD7-205ENST00000527825 C10orf95Q9H7T3 257 aa1.93□□□□□ -2.1
CHD7-205ENST00000527825 KRTAP12-1P59990 96 aa1.92□□□□□ -2.1
CHD7-205ENST00000527825 SPRR2DP22532 72 aa1.91□□□□□ -2.1
CHD7-205ENST00000527825 KRTAP12-2P59991 146 aa1.91□□□□□ -2.1
CHD7-205ENST00000527825 SPRR2FQ96RM1 72 aa1.91□□□□□ -2.1
CHD7-205ENST00000527825 PLAC4Q8WY50 150 aa1.89□□□□□ -2.11
CHD7-205ENST00000527825 KRTAP4-3Q9BYR4 195 aa1.89□□□□□ -2.11
CHD7-205ENST00000527825 PRO2289Q9P1D8 64 aa1.89□□□□□ -2.11
CHD7-205ENST00000527825 A0A0D9SG42 100 aa1.88□□□□□ -2.11
CHD7-205ENST00000527825 M0QZ58 72 aa1.88□□□□□ -2.11
CHD7-205ENST00000527825 LCE3EQ5T5B0 92 aa1.87□□□□□ -2.11
CHD7-205ENST00000527825 OBSCNQ5VST9 7968 aa1.86□□□□□ -2.11
CHD7-205ENST00000527825 LCE3AQ5TA76 89 aa1.83□□□□□ -2.12
CHD7-205ENST00000527825 INE1O15225 51 aa1.81□□□□□ -2.12
CHD7-205ENST00000527825 PP632Q6XCG6 107 aa1.81□□□□□ -2.12
CHD7-205ENST00000527825 SPRR5A0A1B0GTR4 108 aa1.8□□□□□ -2.12
CHD7-205ENST00000527825 KRTAP8-1Q8IUC2 63 aa1.8□□□□□ -2.12
CHD7-205ENST00000527825 R4GN34 69 aa1.8□□□□□ -2.12
CHD7-205ENST00000527825 DSTQ03001 7570 aaKnown RBP1.79□□□□□ -2.12
CHD7-205ENST00000527825 MT1BP07438 61 aa1.78□□□□□ -2.12
CHD7-205ENST00000527825 KRTAP5-2Q701N4 177 aa1.76□□□□□ -2.13
CHD7-205ENST00000527825 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
CHD7-205ENST00000527825 KRTAP19-8Q3LI54 63 aa1.74□□□□□ -2.13
CHD7-205ENST00000527825 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
CHD7-205ENST00000527825 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
CHD7-205ENST00000527825 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
CHD7-205ENST00000527825 SPRR2GQ9BYE4 73 aa1.7□□□□□ -2.14
CHD7-205ENST00000527825 MT4P47944 62 aa1.69□□□□□ -2.14
CHD7-205ENST00000527825 KRTAP5-5Q701N2 237 aaPredicted RBP1.69□□□□□ -2.14
CHD7-205ENST00000527825 TNP1P09430 55 aa1.65□□□□□ -2.15
CHD7-205ENST00000527825 LCE1CQ5T751 118 aa1.6□□□□□ -2.15
CHD7-205ENST00000527825 LCE1BQ5T7P3 118 aa1.6□□□□□ -2.15
CHD7-205ENST00000527825 MT1XP80297 61 aa1.59□□□□□ -2.15
CHD7-205ENST00000527825 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
CHD7-205ENST00000527825 KRTAP19-3Q7Z4W3 81 aa1.52□□□□□ -2.17
CHD7-205ENST00000527825 LCE3DQ9BYE3 92 aa1.5□□□□□ -2.17
CHD7-205ENST00000527825 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
CHD7-205ENST00000527825 MUC5ACP98088 5654 aa1.49□□□□□ -2.17
CHD7-205ENST00000527825 KRTAP20-2Q3LI61 65 aa1.47□□□□□ -2.17
CHD7-205ENST00000527825 KRTAP12-3P60328 96 aa1.46□□□□□ -2.18
CHD7-205ENST00000527825 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
CHD7-205ENST00000527825 MT1EP04732 61 aa1.44□□□□□ -2.18
CHD7-205ENST00000527825 MT1GP13640 62 aa1.44□□□□□ -2.18
CHD7-205ENST00000527825 KRTAP12-4P60329 112 aa1.42□□□□□ -2.18
CHD7-205ENST00000527825 KRTAP19-7Q3SYF9 63 aa1.42□□□□□ -2.18
CHD7-205ENST00000527825 MT1MQ8N339 61 aa1.4□□□□□ -2.19
CHD7-205ENST00000527825 KRTAP19-5Q3LI72 72 aa1.36□□□□□ -2.19
CHD7-205ENST00000527825 MT1LQ93083 61 aa1.32□□□□□ -2.2
CHD7-205ENST00000527825 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
CHD7-205ENST00000527825 SYNE1Q8NF91 8797 aaKnown RBP1.22□□□□□ -2.21
CHD7-205ENST00000527825 MT1AP04731 61 aa1.16□□□□□ -2.22
CHD7-205ENST00000527825 KRTAP6-2Q3LI66 62 aa1.16□□□□□ -2.22
CHD7-205ENST00000527825 KRTAP21-2Q3LI59 83 aa1.15□□□□□ -2.23
CHD7-205ENST00000527825 KRTAP6-1Q3LI64 71 aa1.14□□□□□ -2.23
CHD7-205ENST00000527825 PRM1P04553 51 aa1.09□□□□□ -2.23
CHD7-205ENST00000527825 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
CHD7-205ENST00000527825 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
CHD7-205ENST00000527825 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms