RNA–Protein interactions for RNA: ENST00000525576.1

NXF1-202, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-202ENST00000525576 SPRR2EP22531 72 aa4.41□□□□□ -1.7
NXF1-202ENST00000525576 SPRR2BP35325 72 aa4.41□□□□□ -1.7
NXF1-202ENST00000525576 SPRR2AP35326 72 aa4.41□□□□□ -1.7
NXF1-202ENST00000525576 Q1T7F1 81 aa4.39□□□□□ -1.71
NXF1-202ENST00000525576 KRTAP2-2Q9BYT5 123 aa4.39□□□□□ -1.71
NXF1-202ENST00000525576 KRTAP2-1Q9BYU5 128 aa4.39□□□□□ -1.71
NXF1-202ENST00000525576 PMAIP1Q13794 54 aa4.37□□□□□ -1.71
NXF1-202ENST00000525576 LCE1AQ5T7P2 110 aa4.37□□□□□ -1.71
NXF1-202ENST00000525576 MIR22HGQ0VDD5 57 aa4.35□□□□□ -1.71
NXF1-202ENST00000525576 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.71
NXF1-202ENST00000525576 RPS28P62857 69 aaKnown RBP4.33□□□□□ -1.72
NXF1-202ENST00000525576 TNP1P09430 55 aa4.31□□□□□ -1.72
NXF1-202ENST00000525576 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
NXF1-202ENST00000525576 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
NXF1-202ENST00000525576 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
NXF1-202ENST00000525576 K7ERS5 55 aa4.28□□□□□ -1.72
NXF1-202ENST00000525576 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
NXF1-202ENST00000525576 SPRR2DP22532 72 aa4.26□□□□□ -1.73
NXF1-202ENST00000525576 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
NXF1-202ENST00000525576 LCE5AQ5TCM9 118 aa4.25□□□□□ -1.73
NXF1-202ENST00000525576 MT1EP04732 61 aa4.22□□□□□ -1.73
NXF1-202ENST00000525576 A6NED7 52 aa4.21□□□□□ -1.74
NXF1-202ENST00000525576 KRTAP19-5Q3LI72 72 aa4.2□□□□□ -1.74
NXF1-202ENST00000525576 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
NXF1-202ENST00000525576 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
NXF1-202ENST00000525576 KRTAP25-1Q3LHN0 102 aa4.16□□□□□ -1.74
NXF1-202ENST00000525576 DSTQ03001 7570 aaKnown RBP4.16□□□□□ -1.74
NXF1-202ENST00000525576 MT1GP13640 62 aa4.12□□□□□ -1.75
NXF1-202ENST00000525576 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
NXF1-202ENST00000525576 MT1LQ93083 61 aa4.07□□□□□ -1.76
NXF1-202ENST00000525576 CDC42SE1Q9NRR8 79 aa4.06□□□□□ -1.76
NXF1-202ENST00000525576 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
NXF1-202ENST00000525576 MT1MQ8N339 61 aa4.01□□□□□ -1.77
NXF1-202ENST00000525576 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
NXF1-202ENST00000525576 ROMO1P60602 79 aa3.98□□□□□ -1.77
NXF1-202ENST00000525576 AHNAK2Q8IVF2 5795 aa3.97□□□□□ -1.77
NXF1-202ENST00000525576 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
NXF1-202ENST00000525576 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
NXF1-202ENST00000525576 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
NXF1-202ENST00000525576 KRTAP5-10Q6L8G5 202 aa3.86□□□□□ -1.79
NXF1-202ENST00000525576 MT3P25713 68 aa3.8□□□□□ -1.8
NXF1-202ENST00000525576 BRK1Q8WUW1 75 aa3.77□□□□□ -1.81
NXF1-202ENST00000525576 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
NXF1-202ENST00000525576 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
NXF1-202ENST00000525576 MT4P47944 62 aa3.74□□□□□ -1.81
NXF1-202ENST00000525576 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
NXF1-202ENST00000525576 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
NXF1-202ENST00000525576 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
NXF1-202ENST00000525576 KRTAP12-4P60329 112 aa3.57□□□□□ -1.84
NXF1-202ENST00000525576 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
NXF1-202ENST00000525576 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
NXF1-202ENST00000525576 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
NXF1-202ENST00000525576 MT1AP04731 61 aa3.48□□□□□ -1.85
NXF1-202ENST00000525576 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
NXF1-202ENST00000525576 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
NXF1-202ENST00000525576 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
NXF1-202ENST00000525576 MUC5ACP98088 5654 aa3.34□□□□□ -1.87
NXF1-202ENST00000525576 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
NXF1-202ENST00000525576 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
NXF1-202ENST00000525576 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
NXF1-202ENST00000525576 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
NXF1-202ENST00000525576 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.92
NXF1-202ENST00000525576 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
NXF1-202ENST00000525576 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
NXF1-202ENST00000525576 INE1O15225 51 aa2.93□□□□□ -1.94
NXF1-202ENST00000525576 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
NXF1-202ENST00000525576 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
NXF1-202ENST00000525576 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
NXF1-202ENST00000525576 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
NXF1-202ENST00000525576 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
NXF1-202ENST00000525576 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
NXF1-202ENST00000525576 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
NXF1-202ENST00000525576 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
NXF1-202ENST00000525576 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
NXF1-202ENST00000525576 PRM1P04553 51 aa2.01□□□□□ -2.09
NXF1-202ENST00000525576 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
NXF1-202ENST00000525576 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
NXF1-202ENST00000525576 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 107.3 ms