RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 LCE2DQ5TA82 110 aaPredicted RBP3.34□□□□□ -1.88
SPIDR-225ENST00000524141 SSPOA2VEC9 5147 aa3.27□□□□□ -1.89
SPIDR-225ENST00000524141 LOC100996750A0A140TA64 210 aa3.26□□□□□ -1.89
SPIDR-225ENST00000524141 MT1GP13640 62 aa3.24□□□□□ -1.89
SPIDR-225ENST00000524141 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
SPIDR-225ENST00000524141 KRTAP19-6Q3LI70 58 aa3.24□□□□□ -1.89
SPIDR-225ENST00000524141 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
SPIDR-225ENST00000524141 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
SPIDR-225ENST00000524141 MT1MQ8N339 61 aa3.22□□□□□ -1.89
SPIDR-225ENST00000524141 KRTAP19-3Q7Z4W3 81 aa3.21□□□□□ -1.9
SPIDR-225ENST00000524141 KRTAP9-2Q9BYQ4 174 aa3.15□□□□□ -1.9
SPIDR-225ENST00000524141 CRCT1Q9UGL9 99 aa3.15□□□□□ -1.9
SPIDR-225ENST00000524141 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.91
SPIDR-225ENST00000524141 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
SPIDR-225ENST00000524141 MT1AP04731 61 aa3.06□□□□□ -1.92
SPIDR-225ENST00000524141 LCE5AQ5TCM9 118 aa3.06□□□□□ -1.92
SPIDR-225ENST00000524141 LCE3BQ5TA77 95 aa3.06□□□□□ -1.92
SPIDR-225ENST00000524141 SPRR2FQ96RM1 72 aa2.98□□□□□ -1.93
SPIDR-225ENST00000524141 KRTAP4-9Q9BYQ8 210 aa2.98□□□□□ -1.93
SPIDR-225ENST00000524141 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
SPIDR-225ENST00000524141 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
SPIDR-225ENST00000524141 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
SPIDR-225ENST00000524141 DSTQ03001 7570 aaKnown RBP2.94□□□□□ -1.94
SPIDR-225ENST00000524141 MACF1Q9UPN3 7388 aaKnown RBP2.93□□□□□ -1.94
SPIDR-225ENST00000524141 SYNE2Q8WXH0 6885 aaKnown RBP2.92□□□□□ -1.94
SPIDR-225ENST00000524141 KRTAP9-7A8MTY7 169 aa2.89□□□□□ -1.95
SPIDR-225ENST00000524141 PRM1P04553 51 aa2.88□□□□□ -1.95
SPIDR-225ENST00000524141 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
SPIDR-225ENST00000524141 SYNE1Q8NF91 8797 aaKnown RBP2.88□□□□□ -1.95
SPIDR-225ENST00000524141 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
SPIDR-225ENST00000524141 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.76□□□□□ -1.97
SPIDR-225ENST00000524141 LCE1AQ5T7P2 110 aa2.74□□□□□ -1.97
SPIDR-225ENST00000524141 KRTAP6-2Q3LI66 62 aa2.74□□□□□ -1.97
SPIDR-225ENST00000524141 KRTAP9-4Q9BYQ2 154 aa2.74□□□□□ -1.97
SPIDR-225ENST00000524141 KRTAP5-9P26371 169 aa2.71□□□□□ -1.98
SPIDR-225ENST00000524141 SPRR2EP22531 72 aa2.66□□□□□ -1.98
SPIDR-225ENST00000524141 SPRR2BP35325 72 aa2.66□□□□□ -1.98
SPIDR-225ENST00000524141 SPRR2AP35326 72 aa2.66□□□□□ -1.98
SPIDR-225ENST00000524141 MT3P25713 68 aa2.64□□□□□ -1.99
SPIDR-225ENST00000524141 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
SPIDR-225ENST00000524141 KRTAP6-3Q3LI67 103 aa2.61□□□□□ -1.99
SPIDR-225ENST00000524141 KRTAP2-2Q9BYT5 123 aa2.57□□□□□ -2
SPIDR-225ENST00000524141 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
SPIDR-225ENST00000524141 KRTAP20-1Q3LI63 56 aa2.56□□□□□ -2
SPIDR-225ENST00000524141 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
SPIDR-225ENST00000524141 SPRR2DP22532 72 aa2.54□□□□□ -2
SPIDR-225ENST00000524141 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
SPIDR-225ENST00000524141 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
SPIDR-225ENST00000524141 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
SPIDR-225ENST00000524141 LCE1DQ5T752 114 aa2.43□□□□□ -2.02
SPIDR-225ENST00000524141 KRTAP4-12Q9BQ66 201 aa2.41□□□□□ -2.02
SPIDR-225ENST00000524141 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
SPIDR-225ENST00000524141 NEBP20929 6669 aa2.38□□□□□ -2.03
SPIDR-225ENST00000524141 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
SPIDR-225ENST00000524141 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
SPIDR-225ENST00000524141 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
SPIDR-225ENST00000524141 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
SPIDR-225ENST00000524141 KRTAP4-11Q9BYQ6 195 aa2.23□□□□□ -2.05
SPIDR-225ENST00000524141 MT4P47944 62 aa2.21□□□□□ -2.05
SPIDR-225ENST00000524141 LCE4AQ5TA78 99 aa2.21□□□□□ -2.06
SPIDR-225ENST00000524141 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
SPIDR-225ENST00000524141 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
SPIDR-225ENST00000524141 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
SPIDR-225ENST00000524141 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
SPIDR-225ENST00000524141 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
SPIDR-225ENST00000524141 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
SPIDR-225ENST00000524141 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
SPIDR-225ENST00000524141 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
SPIDR-225ENST00000524141 LCE1CQ5T751 118 aa2□□□□□ -2.09
SPIDR-225ENST00000524141 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
SPIDR-225ENST00000524141 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
SPIDR-225ENST00000524141 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
SPIDR-225ENST00000524141 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
SPIDR-225ENST00000524141 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
SPIDR-225ENST00000524141 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
SPIDR-225ENST00000524141 KRTAP4-4Q9BYR3 166 aa1.69□□□□□ -2.14
SPIDR-225ENST00000524141 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
SPIDR-225ENST00000524141 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 7.6 ms