RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 KRTAP2-1Q9BYU5 128 aa3.66□□□□□ -1.82
SPIDR-224ENST00000524126 KRTAP4-7Q9BYR0 210 aa3.57□□□□□ -1.84
SPIDR-224ENST00000524126 FCGBPQ9Y6R7 5405 aaPredicted RBP3.55□□□□□ -1.84
SPIDR-224ENST00000524126 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
SPIDR-224ENST00000524126 KRTAP4-8A0A0G2JLE6 195 aa3.53□□□□□ -1.84
SPIDR-224ENST00000524126 KRTAP4-8Q9BYQ9 185 aa3.53□□□□□ -1.84
SPIDR-224ENST00000524126 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
SPIDR-224ENST00000524126 KRTAP6-3Q3LI67 103 aa3.52□□□□□ -1.85
SPIDR-224ENST00000524126 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
SPIDR-224ENST00000524126 NEBP20929 6669 aa3.48□□□□□ -1.85
SPIDR-224ENST00000524126 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
SPIDR-224ENST00000524126 KRTAP12-4P60329 112 aa3.4□□□□□ -1.87
SPIDR-224ENST00000524126 MUC12Q9UKN1 5478 aa3.37□□□□□ -1.87
SPIDR-224ENST00000524126 KRTAP19-7Q3SYF9 63 aa3.35□□□□□ -1.87
SPIDR-224ENST00000524126 KRTAP19-4Q3LI73 84 aa3.32□□□□□ -1.88
SPIDR-224ENST00000524126 MT1LQ93083 61 aa3.28□□□□□ -1.88
SPIDR-224ENST00000524126 GPR98Q8WXG9 6306 aa3.26□□□□□ -1.89
SPIDR-224ENST00000524126 DSTQ03001 7570 aaKnown RBP3.24□□□□□ -1.89
SPIDR-224ENST00000524126 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
SPIDR-224ENST00000524126 MT1EP04732 61 aa3.21□□□□□ -1.9
SPIDR-224ENST00000524126 MDN1Q9NU22 5596 aa3.2□□□□□ -1.9
SPIDR-224ENST00000524126 MT1GP13640 62 aa3.19□□□□□ -1.9
SPIDR-224ENST00000524126 KRTAP4-9Q9BYQ8 210 aa3.16□□□□□ -1.9
SPIDR-224ENST00000524126 SPRR2FQ96RM1 72 aa3.15□□□□□ -1.9
SPIDR-224ENST00000524126 KRTAP2-2Q9BYT5 123 aa3.14□□□□□ -1.91
SPIDR-224ENST00000524126 KRTAP5-3Q6L8H2 238 aa3.12□□□□□ -1.91
SPIDR-224ENST00000524126 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
SPIDR-224ENST00000524126 PRM1P04553 51 aa3.09□□□□□ -1.91
SPIDR-224ENST00000524126 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.91
SPIDR-224ENST00000524126 LCE3BQ5TA77 95 aa3.08□□□□□ -1.92
SPIDR-224ENST00000524126 KRTAP19-3Q7Z4W3 81 aa3.05□□□□□ -1.92
SPIDR-224ENST00000524126 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
SPIDR-224ENST00000524126 MT1MQ8N339 61 aa3.02□□□□□ -1.93
SPIDR-224ENST00000524126 LCE1AQ5T7P2 110 aa3□□□□□ -1.93
SPIDR-224ENST00000524126 LCE5AQ5TCM9 118 aa2.99□□□□□ -1.93
SPIDR-224ENST00000524126 SPRR2EP22531 72 aa2.98□□□□□ -1.93
SPIDR-224ENST00000524126 SPRR2BP35325 72 aa2.98□□□□□ -1.93
SPIDR-224ENST00000524126 SPRR2AP35326 72 aa2.98□□□□□ -1.93
SPIDR-224ENST00000524126 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
SPIDR-224ENST00000524126 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
SPIDR-224ENST00000524126 MT1AP04731 61 aa2.91□□□□□ -1.94
SPIDR-224ENST00000524126 SPRR2DP22532 72 aa2.89□□□□□ -1.95
SPIDR-224ENST00000524126 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
SPIDR-224ENST00000524126 KRTAP9-4Q9BYQ2 154 aa2.87□□□□□ -1.95
SPIDR-224ENST00000524126 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
SPIDR-224ENST00000524126 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
SPIDR-224ENST00000524126 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
SPIDR-224ENST00000524126 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
SPIDR-224ENST00000524126 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
SPIDR-224ENST00000524126 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
SPIDR-224ENST00000524126 LCE1DQ5T752 114 aa2.8□□□□□ -1.96
SPIDR-224ENST00000524126 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
SPIDR-224ENST00000524126 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
SPIDR-224ENST00000524126 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
SPIDR-224ENST00000524126 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
SPIDR-224ENST00000524126 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.98
SPIDR-224ENST00000524126 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
SPIDR-224ENST00000524126 LCE4AQ5TA78 99 aa2.55□□□□□ -2
SPIDR-224ENST00000524126 KRTAP4-11Q9BYQ6 195 aa2.55□□□□□ -2
SPIDR-224ENST00000524126 MT4P47944 62 aa2.55□□□□□ -2
SPIDR-224ENST00000524126 KRTAP5-4Q6L8H1 288 aa2.52□□□□□ -2.01
SPIDR-224ENST00000524126 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
SPIDR-224ENST00000524126 MT3P25713 68 aa2.43□□□□□ -2.02
SPIDR-224ENST00000524126 MUC5ACP98088 5654 aa2.4□□□□□ -2.03
SPIDR-224ENST00000524126 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
SPIDR-224ENST00000524126 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
SPIDR-224ENST00000524126 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
SPIDR-224ENST00000524126 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
SPIDR-224ENST00000524126 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
SPIDR-224ENST00000524126 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
SPIDR-224ENST00000524126 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
SPIDR-224ENST00000524126 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
SPIDR-224ENST00000524126 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
SPIDR-224ENST00000524126 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
SPIDR-224ENST00000524126 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
SPIDR-224ENST00000524126 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
SPIDR-224ENST00000524126 KRTAP5-11Q6L8G4 156 aa1.64□□□□□ -2.15
SPIDR-224ENST00000524126 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 106.7 ms