RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 KRTAP19-3Q7Z4W3 81 aa3.72□□□□□ -1.81
TNPO1-213ENST00000523768 MT1GP13640 62 aa3.71□□□□□ -1.82
TNPO1-213ENST00000523768 MT1MQ8N339 61 aa3.7□□□□□ -1.82
TNPO1-213ENST00000523768 FSIP2Q5CZC0 6907 aa3.69□□□□□ -1.82
TNPO1-213ENST00000523768 KRTAP4-3Q9BYR4 195 aa3.68□□□□□ -1.82
TNPO1-213ENST00000523768 FCGBPQ9Y6R7 5405 aaPredicted RBP3.68□□□□□ -1.82
TNPO1-213ENST00000523768 LOC100996750A0A140TA64 210 aa3.65□□□□□ -1.82
TNPO1-213ENST00000523768 MUC12Q9UKN1 5478 aa3.61□□□□□ -1.83
TNPO1-213ENST00000523768 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
TNPO1-213ENST00000523768 SPRR2FQ96RM1 72 aa3.57□□□□□ -1.84
TNPO1-213ENST00000523768 CRCT1Q9UGL9 99 aa3.51□□□□□ -1.85
TNPO1-213ENST00000523768 MACF1Q9UPN3 7388 aaKnown RBP3.44□□□□□ -1.86
TNPO1-213ENST00000523768 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
TNPO1-213ENST00000523768 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
TNPO1-213ENST00000523768 KRTAP4-6Q9BYQ5 205 aa3.39□□□□□ -1.87
TNPO1-213ENST00000523768 KRTAP9-2Q9BYQ4 174 aa3.37□□□□□ -1.87
TNPO1-213ENST00000523768 LCE1AQ5T7P2 110 aa3.37□□□□□ -1.87
TNPO1-213ENST00000523768 KRTAP12-4P60329 112 aa3.35□□□□□ -1.87
TNPO1-213ENST00000523768 LCE3BQ5TA77 95 aa3.34□□□□□ -1.87
TNPO1-213ENST00000523768 MT1AP04731 61 aa3.33□□□□□ -1.88
TNPO1-213ENST00000523768 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
TNPO1-213ENST00000523768 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
TNPO1-213ENST00000523768 MDN1Q9NU22 5596 aa3.29□□□□□ -1.88
TNPO1-213ENST00000523768 SYNE2Q8WXH0 6885 aaKnown RBP3.28□□□□□ -1.88
TNPO1-213ENST00000523768 SPRR2EP22531 72 aa3.26□□□□□ -1.89
TNPO1-213ENST00000523768 SPRR2BP35325 72 aa3.26□□□□□ -1.89
TNPO1-213ENST00000523768 SPRR2AP35326 72 aa3.26□□□□□ -1.89
TNPO1-213ENST00000523768 KRTAP4-9Q9BYQ8 210 aa3.25□□□□□ -1.89
TNPO1-213ENST00000523768 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
TNPO1-213ENST00000523768 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
TNPO1-213ENST00000523768 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
TNPO1-213ENST00000523768 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
TNPO1-213ENST00000523768 SPRR2DP22532 72 aa3.12□□□□□ -1.91
TNPO1-213ENST00000523768 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
TNPO1-213ENST00000523768 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.06□□□□□ -1.92
TNPO1-213ENST00000523768 MT3P25713 68 aa2.99□□□□□ -1.93
TNPO1-213ENST00000523768 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
TNPO1-213ENST00000523768 KRTAP9-7A8MTY7 169 aa2.98□□□□□ -1.93
TNPO1-213ENST00000523768 PRM1P04553 51 aa2.94□□□□□ -1.94
TNPO1-213ENST00000523768 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
TNPO1-213ENST00000523768 KRTAP9-6A0A140TA67 174 aa2.91□□□□□ -1.94
TNPO1-213ENST00000523768 NEBP20929 6669 aa2.82□□□□□ -1.96
TNPO1-213ENST00000523768 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
TNPO1-213ENST00000523768 KRTAP9-9Q9BYP9 154 aa2.77□□□□□ -1.97
TNPO1-213ENST00000523768 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
TNPO1-213ENST00000523768 LCE4AQ5TA78 99 aa2.76□□□□□ -1.97
TNPO1-213ENST00000523768 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
TNPO1-213ENST00000523768 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
TNPO1-213ENST00000523768 MT4P47944 62 aa2.72□□□□□ -1.97
TNPO1-213ENST00000523768 HMCN1Q96RW7 5635 aa2.7□□□□□ -1.98
TNPO1-213ENST00000523768 LCE1DQ5T752 114 aa2.68□□□□□ -1.98
TNPO1-213ENST00000523768 KRTAP5-3Q6L8H2 238 aa2.62□□□□□ -1.99
TNPO1-213ENST00000523768 KRTAP20-1Q3LI63 56 aa2.61□□□□□ -1.99
TNPO1-213ENST00000523768 KRTAP2-2Q9BYT5 123 aa2.61□□□□□ -1.99
TNPO1-213ENST00000523768 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -1.99
TNPO1-213ENST00000523768 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
TNPO1-213ENST00000523768 KRTAP4-11Q9BYQ6 195 aa2.49□□□□□ -2.01
TNPO1-213ENST00000523768 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
TNPO1-213ENST00000523768 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
TNPO1-213ENST00000523768 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
TNPO1-213ENST00000523768 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
TNPO1-213ENST00000523768 LCE1CQ5T751 118 aa2.34□□□□□ -2.04
TNPO1-213ENST00000523768 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
TNPO1-213ENST00000523768 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
TNPO1-213ENST00000523768 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
TNPO1-213ENST00000523768 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
TNPO1-213ENST00000523768 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
TNPO1-213ENST00000523768 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
TNPO1-213ENST00000523768 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
TNPO1-213ENST00000523768 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
TNPO1-213ENST00000523768 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
TNPO1-213ENST00000523768 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
TNPO1-213ENST00000523768 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
TNPO1-213ENST00000523768 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
TNPO1-213ENST00000523768 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
TNPO1-213ENST00000523768 LCE1FQ5T754 118 aa1.69□□□□□ -2.14
TNPO1-213ENST00000523768 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 135.3 ms