RNA–Protein interactions for RNA: ENST00000523699.5

CDK16-222, Transcript of cyclin dependent kinase 16, human

TSL 5

Gene CDK16, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-222	ENST00000523699	LCE4A	Q5TA78	99 aa		5.59	□□□□□ -1.51
CDK16-222	ENST00000523699	MT1M	Q8N339	61 aa		5.58	□□□□□ -1.52
CDK16-222	ENST00000523699	KRTAP15-1	Q3LI76	137 aa		5.57	□□□□□ -1.52
CDK16-222	ENST00000523699	PRR15L	Q9BU68	103 aa		5.56	□□□□□ -1.52
CDK16-222	ENST00000523699	HMCN1	Q96RW7	5635 aa		5.56	□□□□□ -1.52
CDK16-222	ENST00000523699	MT1L	Q93083	61 aa		5.55	□□□□□ -1.52
CDK16-222	ENST00000523699	MT4	P47944	62 aa		5.54	□□□□□ -1.52
CDK16-222	ENST00000523699	TNP1	P09430	55 aa		5.52	□□□□□ -1.53
CDK16-222	ENST00000523699	LOC100996750	A0A140TA64	210 aa		5.5	□□□□□ -1.53
CDK16-222	ENST00000523699		A8MU10	97 aa		5.5	□□□□□ -1.53
CDK16-222	ENST00000523699	KRTAP4-6	Q9BYQ5	205 aa		5.5	□□□□□ -1.53
CDK16-222	ENST00000523699	C10orf95	Q9H7T3	257 aa		5.5	□□□□□ -1.53
CDK16-222	ENST00000523699	LCE3A	Q5TA76	89 aa		5.49	□□□□□ -1.53
CDK16-222	ENST00000523699		Q1T7F1	81 aa		5.43	□□□□□ -1.54
CDK16-222	ENST00000523699	KRTAP4-12	Q9BQ66	201 aa		5.43	□□□□□ -1.54
CDK16-222	ENST00000523699		V9GYY9	64 aa		5.43	□□□□□ -1.54
CDK16-222	ENST00000523699	RPS28	P62857	69 aa	Known RBP	5.41	□□□□□ -1.54
CDK16-222	ENST00000523699	KRTAP4-3	Q9BYR4	195 aa		5.41	□□□□□ -1.54
CDK16-222	ENST00000523699	AHNAK2	Q8IVF2	5795 aa		5.41	□□□□□ -1.54
CDK16-222	ENST00000523699	KRTAP5-4	Q6L8H1	288 aa		5.4	□□□□□ -1.54
CDK16-222	ENST00000523699	KRTAP9-4	Q9BYQ2	154 aa		5.4	□□□□□ -1.54
CDK16-222	ENST00000523699	UQCR11	O14957	56 aa		5.39	□□□□□ -1.55
CDK16-222	ENST00000523699	KRTAP9-9	Q9BYP9	154 aa		5.34	□□□□□ -1.55
CDK16-222	ENST00000523699	PSPHP1	O15172	72 aa		5.33	□□□□□ -1.56
CDK16-222	ENST00000523699	KRTAP5-10	Q6L8G5	202 aa		5.32	□□□□□ -1.56
CDK16-222	ENST00000523699	KRTAP12-3	P60328	96 aa		5.3	□□□□□ -1.56
CDK16-222	ENST00000523699	MIR22HG	Q0VDD5	57 aa		5.29	□□□□□ -1.56
CDK16-222	ENST00000523699	PRAC1	Q96KF2	57 aa		5.28	□□□□□ -1.56
CDK16-222	ENST00000523699	KRTAP4-7	Q9BYR0	210 aa		5.23	□□□□□ -1.57
CDK16-222	ENST00000523699	KRTAP5-7	Q6L8G8	165 aa		5.21	□□□□□ -1.58
CDK16-222	ENST00000523699		A6NED7	52 aa		5.16	□□□□□ -1.58
CDK16-222	ENST00000523699	KRTAP5-3	Q6L8H2	238 aa		5.14	□□□□□ -1.59
CDK16-222	ENST00000523699	KRTAP20-2	Q3LI61	65 aa		5.13	□□□□□ -1.59
CDK16-222	ENST00000523699	KRTAP25-1	Q3LHN0	102 aa		5.12	□□□□□ -1.59
CDK16-222	ENST00000523699	SPRR5	A0A1B0GTR4	108 aa		5.11	□□□□□ -1.59
CDK16-222	ENST00000523699		K7ERS5	55 aa		5.11	□□□□□ -1.59
CDK16-222	ENST00000523699	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.11	□□□□□ -1.59
CDK16-222	ENST00000523699	KRTAP12-4	P60329	112 aa		5.1	□□□□□ -1.59
CDK16-222	ENST00000523699	CDC42SE1	Q9NRR8	79 aa		5.02	□□□□□ -1.61
CDK16-222	ENST00000523699	SYNE1	Q8NF91	8797 aa	Known RBP	4.93	□□□□□ -1.62
CDK16-222	ENST00000523699	LCE3C	Q5T5A8	94 aa		4.85	□□□□□ -1.63
CDK16-222	ENST00000523699	ROMO1	P60602	79 aa		4.84	□□□□□ -1.63
CDK16-222	ENST00000523699	MT1A	P04731	61 aa		4.74	□□□□□ -1.65
CDK16-222	ENST00000523699	BRK1	Q8WUW1	75 aa		4.73	□□□□□ -1.65
CDK16-222	ENST00000523699	KRTAP4-11	Q9BYQ6	195 aa		4.73	□□□□□ -1.65
CDK16-222	ENST00000523699	NDUFAF8	A1L188	74 aa		4.72	□□□□□ -1.65
CDK16-222	ENST00000523699	KRTAP5-2	Q701N4	177 aa		4.7	□□□□□ -1.66
CDK16-222	ENST00000523699	KRTAP6-1	Q3LI64	71 aa		4.69	□□□□□ -1.66
CDK16-222	ENST00000523699	AHNAK	Q09666	5890 aa	Known RBP	4.67	□□□□□ -1.66
CDK16-222	ENST00000523699	MUC5AC	P98088	5654 aa		4.58	□□□□□ -1.68
CDK16-222	ENST00000523699	KRTAP5-8	O75690	187 aa		4.55	□□□□□ -1.68
CDK16-222	ENST00000523699	KRTAP6-2	Q3LI66	62 aa		4.54	□□□□□ -1.68
CDK16-222	ENST00000523699	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.52	□□□□□ -1.69
CDK16-222	ENST00000523699	KRTAP9-6	A8MVA2	160 aa		4.51	□□□□□ -1.69
CDK16-222	ENST00000523699	PMAIP1	Q13794	54 aa		4.47	□□□□□ -1.69
CDK16-222	ENST00000523699	OBSCN	Q5VST9	7968 aa		4.44	□□□□□ -1.7
CDK16-222	ENST00000523699	PRO0628	Q9UI54	55 aa		4.4	□□□□□ -1.71
CDK16-222	ENST00000523699	MT3	P25713	68 aa		4.37	□□□□□ -1.71
CDK16-222	ENST00000523699	KRTAP4-2	Q9BYR5	136 aa		4.34	□□□□□ -1.71
CDK16-222	ENST00000523699	KRTAP5-1	Q6L8H4	278 aa		4.23	□□□□□ -1.73
CDK16-222	ENST00000523699	LCE1F	Q5T754	118 aa		4.16	□□□□□ -1.74
CDK16-222	ENST00000523699	KTN1-AS1	Q86SY8	53 aa		4.14	□□□□□ -1.75
CDK16-222	ENST00000523699	LCE1E	Q5T753	118 aa		4.04	□□□□□ -1.76
CDK16-222	ENST00000523699	LUZP6	Q538Z0	58 aa		3.89	□□□□□ -1.79
CDK16-222	ENST00000523699	LCE1B	Q5T7P3	118 aa		3.83	□□□□□ -1.8
CDK16-222	ENST00000523699	LCE1C	Q5T751	118 aa		3.73	□□□□□ -1.81
CDK16-222	ENST00000523699	LCE3E	Q5T5B0	92 aa		3.53	□□□□□ -1.84
CDK16-222	ENST00000523699	LCE3D	Q9BYE3	92 aa		3.48	□□□□□ -1.85
CDK16-222	ENST00000523699	KRTAP5-11	Q6L8G4	156 aa		3.41	□□□□□ -1.86
CDK16-222	ENST00000523699	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.37	□□□□□ -1.87
CDK16-222	ENST00000523699	PHGR1	C9JFL3	82 aa		3.18	□□□□□ -1.9
CDK16-222	ENST00000523699	KRTAP21-2	Q3LI59	83 aa		3.08	□□□□□ -1.92
CDK16-222	ENST00000523699	KRTAP4-4	Q9BYR3	166 aa		2.85	□□□□□ -1.95
CDK16-222	ENST00000523699	MUC19	Q7Z5P9	8384 aa		2.76	□□□□□ -1.97
CDK16-222	ENST00000523699	INE1	O15225	51 aa		2.68	□□□□□ -1.98
CDK16-222	ENST00000523699	PRM1	P04553	51 aa		2.49	□□□□□ -2.01
CDK16-222	ENST00000523699	KRTAP21-1	Q3LI58	79 aa		2.45	□□□□□ -2.02
CDK16-222	ENST00000523699	MUC16	Q8WXI7	14507 aa		1.94	□□□□□ -2.1

Retrieved 78 of 20,778 RNA–protein pairs in 69 ms