RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 MRPL34Q9BQ48 92 aaKnown RBP2.65□□□□□ -1.99
PABPC1-223ENST00000523636 MT2AP02795 61 aa2.64□□□□□ -1.99
PABPC1-223ENST00000523636 MT1FP04733 61 aa2.64□□□□□ -1.99
PABPC1-223ENST00000523636 LINC00304Q8N9R0 145 aa2.62□□□□□ -1.99
PABPC1-223ENST00000523636 Q96NJ1 140 aa2.62□□□□□ -1.99
PABPC1-223ENST00000523636 ACYP2P14621 99 aa2.6□□□□□ -1.99
PABPC1-223ENST00000523636 PCOTHQ58A44 107 aa2.59□□□□□ -1.99
PABPC1-223ENST00000523636 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
PABPC1-223ENST00000523636 A0A1B0GU69 56 aa2.57□□□□□ -2
PABPC1-223ENST00000523636 SPINK1P00995 79 aa2.56□□□□□ -2
PABPC1-223ENST00000523636 KRTAP13-2Q52LG2 175 aa2.56□□□□□ -2
PABPC1-223ENST00000523636 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
PABPC1-223ENST00000523636 INE1O15225 51 aa2.55□□□□□ -2
PABPC1-223ENST00000523636 KRTAP12-2P59991 146 aa2.55□□□□□ -2
PABPC1-223ENST00000523636 RPS29P62273 56 aaKnown RBP2.54□□□□□ -2
PABPC1-223ENST00000523636 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
PABPC1-223ENST00000523636 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
PABPC1-223ENST00000523636 SPRR2EP22531 72 aa2.52□□□□□ -2.01
PABPC1-223ENST00000523636 SPRR2BP35325 72 aa2.52□□□□□ -2.01
PABPC1-223ENST00000523636 SPRR2AP35326 72 aa2.52□□□□□ -2.01
PABPC1-223ENST00000523636 COX6B2Q6YFQ2 88 aa2.51□□□□□ -2.01
PABPC1-223ENST00000523636 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
PABPC1-223ENST00000523636 KRTAP10-10P60014 251 aa2.48□□□□□ -2.01
PABPC1-223ENST00000523636 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
PABPC1-223ENST00000523636 SPRR2DP22532 72 aa2.43□□□□□ -2.02
PABPC1-223ENST00000523636 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
PABPC1-223ENST00000523636 SPRR2FQ96RM1 72 aa2.41□□□□□ -2.02
PABPC1-223ENST00000523636 PLAC4Q8WY50 150 aa2.4□□□□□ -2.03
PABPC1-223ENST00000523636 C9orf92A6NGG3 77 aa2.39□□□□□ -2.03
PABPC1-223ENST00000523636 PP632Q6XCG6 107 aa2.34□□□□□ -2.03
PABPC1-223ENST00000523636 CRIPTQ9P021 101 aa2.34□□□□□ -2.03
PABPC1-223ENST00000523636 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
PABPC1-223ENST00000523636 H1FX-AS1Q4G0G2 97 aa2.33□□□□□ -2.04
PABPC1-223ENST00000523636 RPL37P61927 97 aaKnown RBP2.32□□□□□ -2.04
PABPC1-223ENST00000523636 H0YAA0 97 aa2.31□□□□□ -2.04
PABPC1-223ENST00000523636 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
PABPC1-223ENST00000523636 S4R3F8 94 aa2.28□□□□□ -2.04
PABPC1-223ENST00000523636 MT1BP07438 61 aa2.27□□□□□ -2.05
PABPC1-223ENST00000523636 KRTAP13-4Q3LI77 160 aa2.27□□□□□ -2.05
PABPC1-223ENST00000523636 LCE3AQ5TA76 89 aa2.26□□□□□ -2.05
PABPC1-223ENST00000523636 KRTAP4-3Q9BYR4 195 aa2.25□□□□□ -2.05
PABPC1-223ENST00000523636 OBSCNQ5VST9 7968 aa2.24□□□□□ -2.05
PABPC1-223ENST00000523636 M0QZ58 72 aa2.22□□□□□ -2.05
PABPC1-223ENST00000523636 MT4P47944 62 aa2.21□□□□□ -2.06
PABPC1-223ENST00000523636 A0A0D9SG42 100 aa2.18□□□□□ -2.06
PABPC1-223ENST00000523636 KRTAP8-1Q8IUC2 63 aa2.16□□□□□ -2.06
PABPC1-223ENST00000523636 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
PABPC1-223ENST00000523636 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
PABPC1-223ENST00000523636 C10orf95Q9H7T3 257 aa2.13□□□□□ -2.07
PABPC1-223ENST00000523636 KRTAP5-5Q701N2 237 aaPredicted RBP2.12□□□□□ -2.07
PABPC1-223ENST00000523636 KRTAP12-1P59990 96 aa2.11□□□□□ -2.07
PABPC1-223ENST00000523636 KRTAP19-8Q3LI54 63 aa2.11□□□□□ -2.07
PABPC1-223ENST00000523636 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
PABPC1-223ENST00000523636 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
PABPC1-223ENST00000523636 SPRR2GQ9BYE4 73 aa1.99□□□□□ -2.09
PABPC1-223ENST00000523636 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
PABPC1-223ENST00000523636 TNP1P09430 55 aa1.97□□□□□ -2.09
PABPC1-223ENST00000523636 MT1XP80297 61 aa1.95□□□□□ -2.1
PABPC1-223ENST00000523636 KRTAP20-2Q3LI61 65 aa1.95□□□□□ -2.1
PABPC1-223ENST00000523636 SYNE1Q8NF91 8797 aaKnown RBP1.93□□□□□ -2.1
PABPC1-223ENST00000523636 KRTAP12-4P60329 112 aa1.85□□□□□ -2.11
PABPC1-223ENST00000523636 KRTAP19-3Q7Z4W3 81 aa1.84□□□□□ -2.11
PABPC1-223ENST00000523636 KRTAP19-7Q3SYF9 63 aa1.77□□□□□ -2.13
PABPC1-223ENST00000523636 MT1EP04732 61 aa1.75□□□□□ -2.13
PABPC1-223ENST00000523636 KRTAP12-3P60328 96 aa1.73□□□□□ -2.13
PABPC1-223ENST00000523636 MT1MQ8N339 61 aa1.72□□□□□ -2.13
PABPC1-223ENST00000523636 MT1GP13640 62 aa1.68□□□□□ -2.14
PABPC1-223ENST00000523636 KRTAP19-5Q3LI72 72 aa1.62□□□□□ -2.15
PABPC1-223ENST00000523636 MT1LQ93083 61 aa1.56□□□□□ -2.16
PABPC1-223ENST00000523636 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
PABPC1-223ENST00000523636 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
PABPC1-223ENST00000523636 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
PABPC1-223ENST00000523636 KRTAP6-2Q3LI66 62 aa1.41□□□□□ -2.18
PABPC1-223ENST00000523636 KRTAP6-1Q3LI64 71 aa1.38□□□□□ -2.19
PABPC1-223ENST00000523636 MT1AP04731 61 aa1.34□□□□□ -2.19
PABPC1-223ENST00000523636 PRM1P04553 51 aa1.25□□□□□ -2.21
PABPC1-223ENST00000523636 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
PABPC1-223ENST00000523636 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 134.9 ms