RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
MRPS28-209ENST00000522987 SEC61GP60059 68 aa5.47□□□□□ -1.53
MRPS28-209ENST00000522987 MT1LQ93083 61 aa5.47□□□□□ -1.53
MRPS28-209ENST00000522987 AHNAK2Q8IVF2 5795 aa5.45□□□□□ -1.54
MRPS28-209ENST00000522987 A0A1B0GU33 70 aa5.43□□□□□ -1.54
MRPS28-209ENST00000522987 LCE3AQ5TA76 89 aa5.38□□□□□ -1.55
MRPS28-209ENST00000522987 C10orf95Q9H7T3 257 aa5.38□□□□□ -1.55
MRPS28-209ENST00000522987 RPS28P62857 69 aaKnown RBP5.34□□□□□ -1.55
MRPS28-209ENST00000522987 KRTAP5-4Q6L8H1 288 aa5.34□□□□□ -1.55
MRPS28-209ENST00000522987 A8MU10 97 aa5.33□□□□□ -1.56
MRPS28-209ENST00000522987 KRTAP5-10Q6L8G5 202 aa5.33□□□□□ -1.56
MRPS28-209ENST00000522987 KRTAP4-2Q9BYR5 136 aa5.28□□□□□ -1.56
MRPS28-209ENST00000522987 SMIM26A0A096LP01 95 aa5.25□□□□□ -1.57
MRPS28-209ENST00000522987 TNP1P09430 55 aa5.25□□□□□ -1.57
MRPS28-209ENST00000522987 A0A1B0GU69 56 aa5.22□□□□□ -1.57
MRPS28-209ENST00000522987 KRTAP5-3Q6L8H2 238 aa5.17□□□□□ -1.58
MRPS28-209ENST00000522987 Q1T7F1 81 aa5.13□□□□□ -1.59
MRPS28-209ENST00000522987 KRTAP5-7Q6L8G8 165 aa5.13□□□□□ -1.59
MRPS28-209ENST00000522987 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
MRPS28-209ENST00000522987 V9GYY9 64 aa5.12□□□□□ -1.59
MRPS28-209ENST00000522987 KRTAP20-2Q3LI61 65 aa5.11□□□□□ -1.59
MRPS28-209ENST00000522987 LINC01558Q9Y6Z2 57 aa5.11□□□□□ -1.59
MRPS28-209ENST00000522987 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
MRPS28-209ENST00000522987 KRTAP5-5Q701N2 237 aaPredicted RBP5.04□□□□□ -1.6
MRPS28-209ENST00000522987 SPRR5A0A1B0GTR4 108 aa5.01□□□□□ -1.61
MRPS28-209ENST00000522987 PRR15LQ9BU68 103 aa5□□□□□ -1.61
MRPS28-209ENST00000522987 KRTAP12-4P60329 112 aa4.97□□□□□ -1.61
MRPS28-209ENST00000522987 SYNE1Q8NF91 8797 aaKnown RBP4.91□□□□□ -1.62
MRPS28-209ENST00000522987 PSPHP1O15172 72 aa4.87□□□□□ -1.63
MRPS28-209ENST00000522987 UQCR11O14957 56 aa4.86□□□□□ -1.63
MRPS28-209ENST00000522987 KRTAP25-1Q3LHN0 102 aa4.78□□□□□ -1.64
MRPS28-209ENST00000522987 CDC42SE1Q9NRR8 79 aa4.77□□□□□ -1.65
MRPS28-209ENST00000522987 A6NED7 52 aa4.76□□□□□ -1.65
MRPS28-209ENST00000522987 MIR22HGQ0VDD5 57 aa4.75□□□□□ -1.65
MRPS28-209ENST00000522987 KRTAP15-1Q3LI76 137 aa4.69□□□□□ -1.66
MRPS28-209ENST00000522987 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
MRPS28-209ENST00000522987 KRTAP6-1Q3LI64 71 aa4.67□□□□□ -1.66
MRPS28-209ENST00000522987 SVIPQ8NHG7 77 aa4.64□□□□□ -1.67
MRPS28-209ENST00000522987 MT1AP04731 61 aa4.63□□□□□ -1.67
MRPS28-209ENST00000522987 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
MRPS28-209ENST00000522987 KRTAP19-4Q3LI73 84 aa4.62□□□□□ -1.67
MRPS28-209ENST00000522987 BRK1Q8WUW1 75 aa4.61□□□□□ -1.67
MRPS28-209ENST00000522987 K7ERS5 55 aa4.6□□□□□ -1.67
MRPS28-209ENST00000522987 PRO0628Q9UI54 55 aa4.58□□□□□ -1.68
MRPS28-209ENST00000522987 KRTAP5-8O75690 187 aa4.57□□□□□ -1.68
MRPS28-209ENST00000522987 KRTAP23-1A1A580 65 aa4.51□□□□□ -1.69
MRPS28-209ENST00000522987 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
MRPS28-209ENST00000522987 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
MRPS28-209ENST00000522987 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
MRPS28-209ENST00000522987 MUC5ACP98088 5654 aa4.48□□□□□ -1.69
MRPS28-209ENST00000522987 MUC5BQ9HC84 5762 aaPredicted RBP4.46□□□□□ -1.7
MRPS28-209ENST00000522987 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
MRPS28-209ENST00000522987 ROMO1P60602 79 aa4.38□□□□□ -1.71
MRPS28-209ENST00000522987 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
MRPS28-209ENST00000522987 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
MRPS28-209ENST00000522987 MT3P25713 68 aa4.23□□□□□ -1.73
MRPS28-209ENST00000522987 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
MRPS28-209ENST00000522987 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
MRPS28-209ENST00000522987 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
MRPS28-209ENST00000522987 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
MRPS28-209ENST00000522987 H3BS24 57 aa3.67□□□□□ -1.82
MRPS28-209ENST00000522987 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
MRPS28-209ENST00000522987 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
MRPS28-209ENST00000522987 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
MRPS28-209ENST00000522987 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
MRPS28-209ENST00000522987 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
MRPS28-209ENST00000522987 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
MRPS28-209ENST00000522987 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
MRPS28-209ENST00000522987 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
MRPS28-209ENST00000522987 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
MRPS28-209ENST00000522987 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
MRPS28-209ENST00000522987 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
MRPS28-209ENST00000522987 A0A0A0MQY5 61 aa3.03□□□□□ -1.92
MRPS28-209ENST00000522987 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
MRPS28-209ENST00000522987 INE1O15225 51 aa2.76□□□□□ -1.97
MRPS28-209ENST00000522987 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
MRPS28-209ENST00000522987 PRM1P04553 51 aa2.22□□□□□ -2.05
MRPS28-209ENST00000522987 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 279.2 ms