RNA–Protein interactions for RNA: ENST00000522702.5

FAM49B-222, Transcript of family with sequence similarity 49 member B, human

TSL 4

Gene FAM49B, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-222	ENST00000522702		Q5VV11	94 aa		1.44	□□□□□ -2.18
FAM49B-222	ENST00000522702	RNF213	Q63HN8	5207 aa		1.43	□□□□□ -2.18
FAM49B-222	ENST00000522702	GPR98	Q8WXG9	6306 aa		1.43	□□□□□ -2.18
FAM49B-222	ENST00000522702	MT1HL1	P0DM35	61 aa		1.41	□□□□□ -2.18
FAM49B-222	ENST00000522702	C9orf92	A6NGG3	77 aa		1.4	□□□□□ -2.19
FAM49B-222	ENST00000522702	RPL37	P61927	97 aa	Known RBP	1.4	□□□□□ -2.19
FAM49B-222	ENST00000522702	KRTAP20-1	Q3LI63	56 aa		1.4	□□□□□ -2.19
FAM49B-222	ENST00000522702	HMCN2	Q8NDA2	5059 aa		1.4	□□□□□ -2.19
FAM49B-222	ENST00000522702	UQCR11	O14957	56 aa		1.39	□□□□□ -2.19
FAM49B-222	ENST00000522702	LINC01558	Q9Y6Z2	57 aa		1.39	□□□□□ -2.19
FAM49B-222	ENST00000522702	NEB	P20929	6669 aa		1.39	□□□□□ -2.19
FAM49B-222	ENST00000522702	LRP2	P98164	4655 aa		1.39	□□□□□ -2.19
FAM49B-222	ENST00000522702	MUC17	Q685J3	4493 aa		1.38	□□□□□ -2.19
FAM49B-222	ENST00000522702	SPINK7	P58062	85 aa		1.37	□□□□□ -2.19
FAM49B-222	ENST00000522702	LPA	P08519	4548 aa		1.36	□□□□□ -2.19
FAM49B-222	ENST00000522702	PRR15L	Q9BU68	103 aa		1.35	□□□□□ -2.19
FAM49B-222	ENST00000522702	SYNE2	Q8WXH0	6885 aa	Known RBP	1.35	□□□□□ -2.19
FAM49B-222	ENST00000522702	SSPO	A2VEC9	5147 aa		1.35	□□□□□ -2.19
FAM49B-222	ENST00000522702	COX6B2	Q6YFQ2	88 aa		1.34	□□□□□ -2.19
FAM49B-222	ENST00000522702	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	1.33	□□□□□ -2.2
FAM49B-222	ENST00000522702		A0A1B0GU69	56 aa		1.31	□□□□□ -2.2
FAM49B-222	ENST00000522702	MACF1	Q9UPN3	7388 aa	Known RBP	1.31	□□□□□ -2.2
FAM49B-222	ENST00000522702	FLG	P20930	4061 aa	Predicted RBP	1.3	□□□□□ -2.2
FAM49B-222	ENST00000522702	H1FX-AS1	Q4G0G2	97 aa		1.3	□□□□□ -2.2
FAM49B-222	ENST00000522702		S4R3F8	94 aa		1.3	□□□□□ -2.2
FAM49B-222	ENST00000522702	SPATA8	Q6RVD6	105 aa		1.26	□□□□□ -2.21
FAM49B-222	ENST00000522702	KRTAP19-2	Q3LHN2	52 aa		1.25	□□□□□ -2.21
FAM49B-222	ENST00000522702		H0YAA0	97 aa		1.24	□□□□□ -2.21
FAM49B-222	ENST00000522702	KRTAP2-3	P0C7H8	128 aa		1.23	□□□□□ -2.21
FAM49B-222	ENST00000522702	KRTAP2-4	Q9BYR9	128 aa		1.23	□□□□□ -2.21
FAM49B-222	ENST00000522702		A0A0D9SG42	100 aa		1.22	□□□□□ -2.21
FAM49B-222	ENST00000522702		M0QZ58	72 aa		1.22	□□□□□ -2.21
FAM49B-222	ENST00000522702	MT1H	P80294	61 aa		1.19	□□□□□ -2.22
FAM49B-222	ENST00000522702	CRIPT	Q9P021	101 aa		1.19	□□□□□ -2.22
FAM49B-222	ENST00000522702	AHNAK2	Q8IVF2	5795 aa		1.18	□□□□□ -2.22
FAM49B-222	ENST00000522702		M0R2T5	61 aa		1.18	□□□□□ -2.22
FAM49B-222	ENST00000522702	KMT2D	O14686	5537 aa		1.17	□□□□□ -2.22
FAM49B-222	ENST00000522702	C10orf95	Q9H7T3	257 aa		1.17	□□□□□ -2.22
FAM49B-222	ENST00000522702	KRTAP2-1	Q9BYU5	128 aa		1.16	□□□□□ -2.22
FAM49B-222	ENST00000522702	MT2A	P02795	61 aa		1.15	□□□□□ -2.23
FAM49B-222	ENST00000522702	MT1F	P04733	61 aa		1.14	□□□□□ -2.23
FAM49B-222	ENST00000522702	SPRR2G	Q9BYE4	73 aa		1.14	□□□□□ -2.23
FAM49B-222	ENST00000522702	MUC12	Q9UKN1	5478 aa		1.13	□□□□□ -2.23
FAM49B-222	ENST00000522702	USH2A	O75445	5202 aa		1.13	□□□□□ -2.23
FAM49B-222	ENST00000522702	KRTAP19-8	Q3LI54	63 aa		1.12	□□□□□ -2.23
FAM49B-222	ENST00000522702	AHNAK	Q09666	5890 aa	Known RBP	1.1	□□□□□ -2.23
FAM49B-222	ENST00000522702	KRTAP5-10	Q6L8G5	202 aa		1.1	□□□□□ -2.23
FAM49B-222	ENST00000522702	DST	Q03001	7570 aa	Known RBP	1.09	□□□□□ -2.23
FAM49B-222	ENST00000522702	MT1B	P07438	61 aa		1.09	□□□□□ -2.23
FAM49B-222	ENST00000522702	TNP1	P09430	55 aa		1.08	□□□□□ -2.24
FAM49B-222	ENST00000522702	MT1X	P80297	61 aa		1.06	□□□□□ -2.24
FAM49B-222	ENST00000522702	MUC5B	Q9HC84	5762 aa	Predicted RBP	1.01	□□□□□ -2.25
FAM49B-222	ENST00000522702	KRTAP19-6	Q3LI70	58 aa		1.01	□□□□□ -2.25
FAM49B-222	ENST00000522702	KRTAP8-1	Q8IUC2	63 aa		1.01	□□□□□ -2.25
FAM49B-222	ENST00000522702	MDN1	Q9NU22	5596 aa		0.98	□□□□□ -2.25
FAM49B-222	ENST00000522702	KRTAP19-5	Q3LI72	72 aa		0.96	□□□□□ -2.26
FAM49B-222	ENST00000522702	KRTAP19-7	Q3SYF9	63 aa		0.95	□□□□□ -2.26
FAM49B-222	ENST00000522702	MUC5AC	P98088	5654 aa		0.94	□□□□□ -2.26
FAM49B-222	ENST00000522702	MT1E	P04732	61 aa		0.93	□□□□□ -2.26
FAM49B-222	ENST00000522702	SPRR2E	P22531	72 aa		0.93	□□□□□ -2.26
FAM49B-222	ENST00000522702	SPRR2B	P35325	72 aa		0.93	□□□□□ -2.26
FAM49B-222	ENST00000522702	SPRR2A	P35326	72 aa		0.93	□□□□□ -2.26
FAM49B-222	ENST00000522702	SPRR2D	P22532	72 aa		0.91	□□□□□ -2.26
FAM49B-222	ENST00000522702	KRTAP19-3	Q7Z4W3	81 aa		0.91	□□□□□ -2.26
FAM49B-222	ENST00000522702	MT1L	Q93083	61 aa		0.91	□□□□□ -2.26
FAM49B-222	ENST00000522702	MT1G	P13640	62 aa		0.89	□□□□□ -2.27
FAM49B-222	ENST00000522702	SPRR2F	Q96RM1	72 aa		0.89	□□□□□ -2.27
FAM49B-222	ENST00000522702	MT1M	Q8N339	61 aa		0.87	□□□□□ -2.27
FAM49B-222	ENST00000522702	MT4	P47944	62 aa		0.83	□□□□□ -2.28
FAM49B-222	ENST00000522702	SYNE1	Q8NF91	8797 aa	Known RBP	0.8	□□□□□ -2.28
FAM49B-222	ENST00000522702	MUC16	Q8WXI7	14507 aa		0.79	□□□□□ -2.28
FAM49B-222	ENST00000522702	MT1A	P04731	61 aa		0.78	□□□□□ -2.28
FAM49B-222	ENST00000522702	KRTAP6-1	Q3LI64	71 aa		0.77	□□□□□ -2.29
FAM49B-222	ENST00000522702	KRTAP6-2	Q3LI66	62 aa		0.7	□□□□□ -2.3
FAM49B-222	ENST00000522702	KRTAP20-2	Q3LI61	65 aa		0.69	□□□□□ -2.3
FAM49B-222	ENST00000522702	PHGR1	C9JFL3	82 aa		0.68	□□□□□ -2.3
FAM49B-222	ENST00000522702	PRM1	P04553	51 aa		0.6	□□□□□ -2.31
FAM49B-222	ENST00000522702	KRTAP21-1	Q3LI58	79 aa		0.6	□□□□□ -2.31

Retrieved 78 of 20,778 RNA–protein pairs in 295.1 ms