RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 LCE4AQ5TA78 99 aa5.54□□□□□ -1.52
TRAPPC9-213ENST00000522504 MT1GP13640 62 aa5.53□□□□□ -1.52
TRAPPC9-213ENST00000522504 MIR22HGQ0VDD5 57 aa5.53□□□□□ -1.52
TRAPPC9-213ENST00000522504 A6NED7 52 aa5.52□□□□□ -1.53
TRAPPC9-213ENST00000522504 KRTAP19-5Q3LI72 72 aa5.52□□□□□ -1.53
TRAPPC9-213ENST00000522504 SPINT4Q6UDR6 99 aa5.51□□□□□ -1.53
TRAPPC9-213ENST00000522504 KRTAP5-10Q6L8G5 202 aa5.49□□□□□ -1.53
TRAPPC9-213ENST00000522504 KRTAP12-1P59990 96 aa5.48□□□□□ -1.53
TRAPPC9-213ENST00000522504 MT1MQ8N339 61 aa5.47□□□□□ -1.53
TRAPPC9-213ENST00000522504 PP632Q6XCG6 107 aa5.44□□□□□ -1.54
TRAPPC9-213ENST00000522504 KRTAP5-4Q6L8H1 288 aa5.43□□□□□ -1.54
TRAPPC9-213ENST00000522504 KRTAP4-6Q9BYQ5 205 aa5.43□□□□□ -1.54
TRAPPC9-213ENST00000522504 KRTAP4-3Q9BYR4 195 aa5.42□□□□□ -1.54
TRAPPC9-213ENST00000522504 MT1LQ93083 61 aa5.41□□□□□ -1.54
TRAPPC9-213ENST00000522504 CDC42SE1Q9NRR8 79 aa5.36□□□□□ -1.55
TRAPPC9-213ENST00000522504 K7ERS5 55 aa5.34□□□□□ -1.55
TRAPPC9-213ENST00000522504 KRTAP5-7Q6L8G8 165 aa5.3□□□□□ -1.56
TRAPPC9-213ENST00000522504 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
TRAPPC9-213ENST00000522504 BRK1Q8WUW1 75 aa5.24□□□□□ -1.57
TRAPPC9-213ENST00000522504 C10orf95Q9H7T3 257 aa5.22□□□□□ -1.57
TRAPPC9-213ENST00000522504 LCE3AQ5TA76 89 aa5.21□□□□□ -1.58
TRAPPC9-213ENST00000522504 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
TRAPPC9-213ENST00000522504 KRTAP4-7Q9BYR0 210 aa5.18□□□□□ -1.58
TRAPPC9-213ENST00000522504 KRTAP20-2Q3LI61 65 aa5.15□□□□□ -1.59
TRAPPC9-213ENST00000522504 TNP1P09430 55 aa5.11□□□□□ -1.59
TRAPPC9-213ENST00000522504 KRTAP5-5Q701N2 237 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC9-213ENST00000522504 ROMO1P60602 79 aa5.06□□□□□ -1.6
TRAPPC9-213ENST00000522504 SPRR5A0A1B0GTR4 108 aa5.04□□□□□ -1.6
TRAPPC9-213ENST00000522504 KRTAP25-1Q3LHN0 102 aa5.03□□□□□ -1.6
TRAPPC9-213ENST00000522504 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
TRAPPC9-213ENST00000522504 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
TRAPPC9-213ENST00000522504 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
TRAPPC9-213ENST00000522504 PRO0628Q9UI54 55 aa4.95□□□□□ -1.62
TRAPPC9-213ENST00000522504 PMAIP1Q13794 54 aa4.93□□□□□ -1.62
TRAPPC9-213ENST00000522504 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
TRAPPC9-213ENST00000522504 AHNAKQ09666 5890 aaKnown RBP4.81□□□□□ -1.64
TRAPPC9-213ENST00000522504 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
TRAPPC9-213ENST00000522504 MUC5ACP98088 5654 aa4.74□□□□□ -1.65
TRAPPC9-213ENST00000522504 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC9-213ENST00000522504 KRTAP5-2Q701N4 177 aa4.7□□□□□ -1.66
TRAPPC9-213ENST00000522504 PRAC1Q96KF2 57 aa4.66□□□□□ -1.66
TRAPPC9-213ENST00000522504 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
TRAPPC9-213ENST00000522504 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
TRAPPC9-213ENST00000522504 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
TRAPPC9-213ENST00000522504 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
TRAPPC9-213ENST00000522504 MT1AP04731 61 aa4.57□□□□□ -1.68
TRAPPC9-213ENST00000522504 KRTAP19-4Q3LI73 84 aa4.57□□□□□ -1.68
TRAPPC9-213ENST00000522504 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
TRAPPC9-213ENST00000522504 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
TRAPPC9-213ENST00000522504 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
TRAPPC9-213ENST00000522504 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.7
TRAPPC9-213ENST00000522504 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
TRAPPC9-213ENST00000522504 SVIPQ8NHG7 77 aa4.43□□□□□ -1.7
TRAPPC9-213ENST00000522504 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
TRAPPC9-213ENST00000522504 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
TRAPPC9-213ENST00000522504 KRTAP5-1Q6L8H4 278 aa4.29□□□□□ -1.72
TRAPPC9-213ENST00000522504 MT3P25713 68 aa4.18□□□□□ -1.74
TRAPPC9-213ENST00000522504 KRTAP4-2Q9BYR5 136 aa4.04□□□□□ -1.76
TRAPPC9-213ENST00000522504 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
TRAPPC9-213ENST00000522504 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
TRAPPC9-213ENST00000522504 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
TRAPPC9-213ENST00000522504 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
TRAPPC9-213ENST00000522504 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
TRAPPC9-213ENST00000522504 H3BS24 57 aa3.43□□□□□ -1.86
TRAPPC9-213ENST00000522504 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
TRAPPC9-213ENST00000522504 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
TRAPPC9-213ENST00000522504 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC9-213ENST00000522504 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
TRAPPC9-213ENST00000522504 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
TRAPPC9-213ENST00000522504 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
TRAPPC9-213ENST00000522504 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
TRAPPC9-213ENST00000522504 A0A0A0MQY5 61 aa3.04□□□□□ -1.92
TRAPPC9-213ENST00000522504 INE1O15225 51 aa2.91□□□□□ -1.94
TRAPPC9-213ENST00000522504 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
TRAPPC9-213ENST00000522504 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
TRAPPC9-213ENST00000522504 PRM1P04553 51 aa2.63□□□□□ -1.99
TRAPPC9-213ENST00000522504 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
TRAPPC9-213ENST00000522504 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 219.7 ms