RNA–Protein interactions for RNA: ENST00000522336.5

CPEB4-209, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 5 BASIC

Gene CPEB4, Length 1,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-209ENST00000522336 TNP1P09430 55 aa3.46□□□□□ -1.86
CPEB4-209ENST00000522336 PRAC1Q96KF2 57 aa3.46□□□□□ -1.86
CPEB4-209ENST00000522336 KRTAP6-3Q3LI67 103 aa3.45□□□□□ -1.86
CPEB4-209ENST00000522336 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
CPEB4-209ENST00000522336 MUC12Q9UKN1 5478 aa3.42□□□□□ -1.86
CPEB4-209ENST00000522336 PP632Q6XCG6 107 aa3.38□□□□□ -1.87
CPEB4-209ENST00000522336 KRTAP10-7P60409 375 aaPredicted RBP3.35□□□□□ -1.87
CPEB4-209ENST00000522336 KRTAP10-12P60413 245 aa3.34□□□□□ -1.87
CPEB4-209ENST00000522336 KMT2DO14686 5537 aa3.34□□□□□ -1.88
CPEB4-209ENST00000522336 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
CPEB4-209ENST00000522336 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
CPEB4-209ENST00000522336 KRTAP8-1Q8IUC2 63 aa3.26□□□□□ -1.89
CPEB4-209ENST00000522336 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
CPEB4-209ENST00000522336 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
CPEB4-209ENST00000522336 MDN1Q9NU22 5596 aa3.22□□□□□ -1.89
CPEB4-209ENST00000522336 KRTAP12-3P60328 96 aa3.18□□□□□ -1.9
CPEB4-209ENST00000522336 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
CPEB4-209ENST00000522336 KRTAP15-1Q3LI76 137 aa3.14□□□□□ -1.91
CPEB4-209ENST00000522336 KRTAP19-7Q3SYF9 63 aa3.13□□□□□ -1.91
CPEB4-209ENST00000522336 KRTAP2-2Q9BYT5 123 aa3.09□□□□□ -1.91
CPEB4-209ENST00000522336 KRTAP2-1Q9BYU5 128 aa3.09□□□□□ -1.91
CPEB4-209ENST00000522336 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
CPEB4-209ENST00000522336 MT1EP04732 61 aa3.08□□□□□ -1.92
CPEB4-209ENST00000522336 KRTAP5-9P26371 169 aa3.03□□□□□ -1.92
CPEB4-209ENST00000522336 MT1LQ93083 61 aa3.02□□□□□ -1.93
CPEB4-209ENST00000522336 SPRR2FQ96RM1 72 aa3.02□□□□□ -1.93
CPEB4-209ENST00000522336 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
CPEB4-209ENST00000522336 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
CPEB4-209ENST00000522336 KRTAP19-3Q7Z4W3 81 aa2.97□□□□□ -1.93
CPEB4-209ENST00000522336 MT1GP13640 62 aa2.96□□□□□ -1.94
CPEB4-209ENST00000522336 MT1MQ8N339 61 aa2.91□□□□□ -1.94
CPEB4-209ENST00000522336 SPRR2EP22531 72 aa2.9□□□□□ -1.95
CPEB4-209ENST00000522336 SPRR2BP35325 72 aa2.9□□□□□ -1.95
CPEB4-209ENST00000522336 SPRR2AP35326 72 aa2.9□□□□□ -1.95
CPEB4-209ENST00000522336 LCE1AQ5T7P2 110 aa2.9□□□□□ -1.95
CPEB4-209ENST00000522336 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
CPEB4-209ENST00000522336 DSTQ03001 7570 aaKnown RBP2.86□□□□□ -1.95
CPEB4-209ENST00000522336 LUZP6Q538Z0 58 aa2.85□□□□□ -1.95
CPEB4-209ENST00000522336 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
CPEB4-209ENST00000522336 KRTAP5-10Q6L8G5 202 aa2.82□□□□□ -1.96
CPEB4-209ENST00000522336 SPRR2DP22532 72 aa2.8□□□□□ -1.96
CPEB4-209ENST00000522336 KRTAP4-3Q9BYR4 195 aa2.8□□□□□ -1.96
CPEB4-209ENST00000522336 KRTAP9-6A8MVA2 160 aa2.79□□□□□ -1.96
CPEB4-209ENST00000522336 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
CPEB4-209ENST00000522336 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
CPEB4-209ENST00000522336 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
CPEB4-209ENST00000522336 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
CPEB4-209ENST00000522336 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
CPEB4-209ENST00000522336 KRTAP5-4Q6L8H1 288 aa2.6□□□□□ -1.99
CPEB4-209ENST00000522336 LCE1EQ5T753 118 aa2.59□□□□□ -1.99
CPEB4-209ENST00000522336 MT1AP04731 61 aa2.57□□□□□ -2
CPEB4-209ENST00000522336 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
CPEB4-209ENST00000522336 MT4P47944 62 aa2.55□□□□□ -2
CPEB4-209ENST00000522336 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
CPEB4-209ENST00000522336 KRTAP6-1Q3LI64 71 aa2.53□□□□□ -2
CPEB4-209ENST00000522336 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
CPEB4-209ENST00000522336 MT3P25713 68 aa2.49□□□□□ -2.01
CPEB4-209ENST00000522336 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
CPEB4-209ENST00000522336 KRTAP12-4P60329 112 aa2.44□□□□□ -2.02
CPEB4-209ENST00000522336 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
CPEB4-209ENST00000522336 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
CPEB4-209ENST00000522336 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
CPEB4-209ENST00000522336 INE1O15225 51 aa2.31□□□□□ -2.04
CPEB4-209ENST00000522336 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
CPEB4-209ENST00000522336 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
CPEB4-209ENST00000522336 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
CPEB4-209ENST00000522336 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
CPEB4-209ENST00000522336 OBSCNQ5VST9 7968 aa2.19□□□□□ -2.06
CPEB4-209ENST00000522336 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
CPEB4-209ENST00000522336 LCE1CQ5T751 118 aa1.9□□□□□ -2.1
CPEB4-209ENST00000522336 LCE1BQ5T7P3 118 aa1.9□□□□□ -2.1
CPEB4-209ENST00000522336 PRM1P04553 51 aa1.86□□□□□ -2.11
CPEB4-209ENST00000522336 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
CPEB4-209ENST00000522336 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
CPEB4-209ENST00000522336 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
CPEB4-209ENST00000522336 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
CPEB4-209ENST00000522336 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 1107.4 ms