RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 FCGBPQ9Y6R7 5405 aaPredicted RBP4.01□□□□□ -1.77
SPIDR-217ENST00000522117 KRTAP4-8A0A0G2JLE6 195 aa3.95□□□□□ -1.78
SPIDR-217ENST00000522117 KRTAP4-8Q9BYQ9 185 aa3.95□□□□□ -1.78
SPIDR-217ENST00000522117 SYNE2Q8WXH0 6885 aaKnown RBP3.94□□□□□ -1.78
SPIDR-217ENST00000522117 KRTAP9-6A0A140TA67 174 aa3.93□□□□□ -1.78
SPIDR-217ENST00000522117 MACF1Q9UPN3 7388 aaKnown RBP3.93□□□□□ -1.78
SPIDR-217ENST00000522117 LCE5AQ5TCM9 118 aa3.9□□□□□ -1.78
SPIDR-217ENST00000522117 LCE1DQ5T752 114 aa3.9□□□□□ -1.79
SPIDR-217ENST00000522117 MUC12Q9UKN1 5478 aa3.9□□□□□ -1.79
SPIDR-217ENST00000522117 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
SPIDR-217ENST00000522117 KRTAP19-7Q3SYF9 63 aa3.88□□□□□ -1.79
SPIDR-217ENST00000522117 KRTAP19-4Q3LI73 84 aa3.83□□□□□ -1.8
SPIDR-217ENST00000522117 KRTAP19-6Q3LI70 58 aa3.82□□□□□ -1.8
SPIDR-217ENST00000522117 KRTAP9-2Q9BYQ4 174 aa3.82□□□□□ -1.8
SPIDR-217ENST00000522117 MT1LQ93083 61 aa3.81□□□□□ -1.8
SPIDR-217ENST00000522117 DSTQ03001 7570 aaKnown RBP3.75□□□□□ -1.81
SPIDR-217ENST00000522117 LOC100996750A0A140TA64 210 aa3.75□□□□□ -1.81
SPIDR-217ENST00000522117 MDN1Q9NU22 5596 aa3.73□□□□□ -1.81
SPIDR-217ENST00000522117 MT1EP04732 61 aa3.7□□□□□ -1.82
SPIDR-217ENST00000522117 PRM1P04553 51 aa3.67□□□□□ -1.82
SPIDR-217ENST00000522117 KRTAP9-7A8MTY7 169 aa3.66□□□□□ -1.82
SPIDR-217ENST00000522117 CRCT1Q9UGL9 99 aa3.64□□□□□ -1.83
SPIDR-217ENST00000522117 MT1GP13640 62 aa3.63□□□□□ -1.83
SPIDR-217ENST00000522117 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
SPIDR-217ENST00000522117 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
SPIDR-217ENST00000522117 KRTAP4-9Q9BYQ8 210 aa3.61□□□□□ -1.83
SPIDR-217ENST00000522117 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
SPIDR-217ENST00000522117 MT1AP04731 61 aa3.52□□□□□ -1.85
SPIDR-217ENST00000522117 LCE3BQ5TA77 95 aa3.51□□□□□ -1.85
SPIDR-217ENST00000522117 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
SPIDR-217ENST00000522117 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
SPIDR-217ENST00000522117 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
SPIDR-217ENST00000522117 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
SPIDR-217ENST00000522117 MT1MQ8N339 61 aa3.42□□□□□ -1.86
SPIDR-217ENST00000522117 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
SPIDR-217ENST00000522117 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.39□□□□□ -1.87
SPIDR-217ENST00000522117 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
SPIDR-217ENST00000522117 KRTAP5-9P26371 169 aa3.33□□□□□ -1.88
SPIDR-217ENST00000522117 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
SPIDR-217ENST00000522117 SPRR2EP22531 72 aa3.27□□□□□ -1.89
SPIDR-217ENST00000522117 SPRR2BP35325 72 aa3.27□□□□□ -1.89
SPIDR-217ENST00000522117 SPRR2AP35326 72 aa3.27□□□□□ -1.89
SPIDR-217ENST00000522117 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
SPIDR-217ENST00000522117 NEBP20929 6669 aa3.25□□□□□ -1.89
SPIDR-217ENST00000522117 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
SPIDR-217ENST00000522117 SPRR2DP22532 72 aa3.12□□□□□ -1.91
SPIDR-217ENST00000522117 MT3P25713 68 aa3.05□□□□□ -1.92
SPIDR-217ENST00000522117 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
SPIDR-217ENST00000522117 LCE4AQ5TA78 99 aa2.92□□□□□ -1.94
SPIDR-217ENST00000522117 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
SPIDR-217ENST00000522117 KRTAP4-6Q9BYQ5 205 aa2.85□□□□□ -1.95
SPIDR-217ENST00000522117 MT4P47944 62 aa2.84□□□□□ -1.95
SPIDR-217ENST00000522117 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
SPIDR-217ENST00000522117 KRTAP20-1Q3LI63 56 aa2.74□□□□□ -1.97
SPIDR-217ENST00000522117 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
SPIDR-217ENST00000522117 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
SPIDR-217ENST00000522117 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
SPIDR-217ENST00000522117 KRTAP20-2Q3LI61 65 aa2.66□□□□□ -1.98
SPIDR-217ENST00000522117 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
SPIDR-217ENST00000522117 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
SPIDR-217ENST00000522117 MUC5ACP98088 5654 aa2.53□□□□□ -2
SPIDR-217ENST00000522117 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
SPIDR-217ENST00000522117 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
SPIDR-217ENST00000522117 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
SPIDR-217ENST00000522117 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
SPIDR-217ENST00000522117 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
SPIDR-217ENST00000522117 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
SPIDR-217ENST00000522117 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
SPIDR-217ENST00000522117 KRTAP4-2Q9BYR5 136 aa2.19□□□□□ -2.06
SPIDR-217ENST00000522117 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
SPIDR-217ENST00000522117 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
SPIDR-217ENST00000522117 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
SPIDR-217ENST00000522117 KRTAP4-12Q9BQ66 201 aa2.05□□□□□ -2.08
SPIDR-217ENST00000522117 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
SPIDR-217ENST00000522117 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
SPIDR-217ENST00000522117 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
SPIDR-217ENST00000522117 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
SPIDR-217ENST00000522117 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 13.2 ms