RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 TNP1P09430 55 aa6.1□□□□□ -1.43
SQLE-205ENST00000521232 PP632Q6XCG6 107 aa6.1□□□□□ -1.43
SQLE-205ENST00000521232 LINC01558Q9Y6Z2 57 aa6.1□□□□□ -1.43
SQLE-205ENST00000521232 LCE3AQ5TA76 89 aa6.07□□□□□ -1.44
SQLE-205ENST00000521232 KRTAP9-9Q9BYP9 154 aa6.07□□□□□ -1.44
SQLE-205ENST00000521232 KRTAP9-4Q9BYQ2 154 aa6.07□□□□□ -1.44
SQLE-205ENST00000521232 MT1LQ93083 61 aa6.06□□□□□ -1.44
SQLE-205ENST00000521232 MT1MQ8N339 61 aa6.05□□□□□ -1.44
SQLE-205ENST00000521232 KRTAP4-9Q9BYQ8 210 aa6.03□□□□□ -1.44
SQLE-205ENST00000521232 TMEM258P61165 79 aa6□□□□□ -1.45
SQLE-205ENST00000521232 UQCR11O14957 56 aa5.95□□□□□ -1.46
SQLE-205ENST00000521232 LCE1DQ5T752 114 aa5.9□□□□□ -1.46
SQLE-205ENST00000521232 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.46
SQLE-205ENST00000521232 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
SQLE-205ENST00000521232 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
SQLE-205ENST00000521232 MT4P47944 62 aa5.81□□□□□ -1.48
SQLE-205ENST00000521232 KRTAP5-4Q6L8H1 288 aa5.81□□□□□ -1.48
SQLE-205ENST00000521232 MIR22HGQ0VDD5 57 aa5.8□□□□□ -1.48
SQLE-205ENST00000521232 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
SQLE-205ENST00000521232 KRTAP25-1Q3LHN0 102 aa5.75□□□□□ -1.49
SQLE-205ENST00000521232 AHNAK2Q8IVF2 5795 aa5.72□□□□□ -1.49
SQLE-205ENST00000521232 K7ERS5 55 aa5.69□□□□□ -1.5
SQLE-205ENST00000521232 V9GYY9 64 aa5.69□□□□□ -1.5
SQLE-205ENST00000521232 PSPHP1O15172 72 aa5.68□□□□□ -1.5
SQLE-205ENST00000521232 Q1T7F1 81 aa5.66□□□□□ -1.5
SQLE-205ENST00000521232 KRTAP15-1Q3LI76 137 aa5.6□□□□□ -1.51
SQLE-205ENST00000521232 KRTAP5-10Q6L8G5 202 aa5.59□□□□□ -1.51
SQLE-205ENST00000521232 KRTAP5-5Q701N2 237 aaPredicted RBP5.57□□□□□ -1.52
SQLE-205ENST00000521232 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
SQLE-205ENST00000521232 A6NED7 52 aa5.48□□□□□ -1.53
SQLE-205ENST00000521232 KRTAP20-2Q3LI61 65 aa5.46□□□□□ -1.54
SQLE-205ENST00000521232 SPRR5A0A1B0GTR4 108 aa5.45□□□□□ -1.54
SQLE-205ENST00000521232 PCP4P48539 62 aa5.44□□□□□ -1.54
SQLE-205ENST00000521232 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
SQLE-205ENST00000521232 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
SQLE-205ENST00000521232 KRTAP5-7Q6L8G8 165 aa5.4□□□□□ -1.54
SQLE-205ENST00000521232 KRTAP4-2Q9BYR5 136 aa5.4□□□□□ -1.54
SQLE-205ENST00000521232 LCE3CQ5T5A8 94 aa5.39□□□□□ -1.55
SQLE-205ENST00000521232 CDC42SE1Q9NRR8 79 aa5.38□□□□□ -1.55
SQLE-205ENST00000521232 KRTAP5-3Q6L8H2 238 aa5.37□□□□□ -1.55
SQLE-205ENST00000521232 RPS28P62857 69 aaKnown RBP5.33□□□□□ -1.56
SQLE-205ENST00000521232 ROMO1P60602 79 aa5.31□□□□□ -1.56
SQLE-205ENST00000521232 A0A0A0MQY5 61 aa5.29□□□□□ -1.56
SQLE-205ENST00000521232 MT1AP04731 61 aa5.16□□□□□ -1.58
SQLE-205ENST00000521232 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
SQLE-205ENST00000521232 KRTAP9-6A8MVA2 160 aa5.09□□□□□ -1.59
SQLE-205ENST00000521232 KRTAP5-2Q701N4 177 aa5.08□□□□□ -1.6
SQLE-205ENST00000521232 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
SQLE-205ENST00000521232 KRTAP5-8O75690 187 aa4.83□□□□□ -1.64
SQLE-205ENST00000521232 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
SQLE-205ENST00000521232 MUC5BQ9HC84 5762 aaPredicted RBP4.77□□□□□ -1.65
SQLE-205ENST00000521232 MUC5ACP98088 5654 aa4.75□□□□□ -1.65
SQLE-205ENST00000521232 AHNAKQ09666 5890 aaKnown RBP4.74□□□□□ -1.65
SQLE-205ENST00000521232 MT3P25713 68 aa4.73□□□□□ -1.65
SQLE-205ENST00000521232 BRK1Q8WUW1 75 aa4.68□□□□□ -1.66
SQLE-205ENST00000521232 KRTAP5-1Q6L8H4 278 aa4.56□□□□□ -1.68
SQLE-205ENST00000521232 PMAIP1Q13794 54 aa4.39□□□□□ -1.71
SQLE-205ENST00000521232 LCE1EQ5T753 118 aa4.37□□□□□ -1.71
SQLE-205ENST00000521232 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
SQLE-205ENST00000521232 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
SQLE-205ENST00000521232 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
SQLE-205ENST00000521232 LCE1CQ5T751 118 aa4.06□□□□□ -1.76
SQLE-205ENST00000521232 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
SQLE-205ENST00000521232 PRO0628Q9UI54 55 aa4.02□□□□□ -1.77
SQLE-205ENST00000521232 LCE3DQ9BYE3 92 aa3.88□□□□□ -1.79
SQLE-205ENST00000521232 KTN1-AS1Q86SY8 53 aa3.86□□□□□ -1.79
SQLE-205ENST00000521232 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
SQLE-205ENST00000521232 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
SQLE-205ENST00000521232 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
SQLE-205ENST00000521232 LUZP6Q538Z0 58 aa3.58□□□□□ -1.84
SQLE-205ENST00000521232 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
SQLE-205ENST00000521232 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
SQLE-205ENST00000521232 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
SQLE-205ENST00000521232 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
SQLE-205ENST00000521232 PRM1P04553 51 aa2.7□□□□□ -1.98
SQLE-205ENST00000521232 INE1O15225 51 aa2.53□□□□□ -2
SQLE-205ENST00000521232 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
SQLE-205ENST00000521232 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 145.4 ms