RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 CHKB-CPT1BH3BT56 60 aa3.11□□□□□ -1.91
PABPC1-213ENST00000519848 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
PABPC1-213ENST00000519848 SPATA8Q6RVD6 105 aa3.11□□□□□ -1.91
PABPC1-213ENST00000519848 MT1MQ8N339 61 aa3.11□□□□□ -1.91
PABPC1-213ENST00000519848 PRAC1Q96KF2 57 aa3.11□□□□□ -1.91
PABPC1-213ENST00000519848 J3QR89 54 aa3.1□□□□□ -1.91
PABPC1-213ENST00000519848 CAMK2N1Q7Z7J9 78 aa3.1□□□□□ -1.91
PABPC1-213ENST00000519848 CYSTM1Q9H1C7 97 aa3.1□□□□□ -1.91
PABPC1-213ENST00000519848 A0A0D9SG42 100 aa3.09□□□□□ -1.91
PABPC1-213ENST00000519848 KRTAP12-1P59990 96 aa3.09□□□□□ -1.91
PABPC1-213ENST00000519848 SPTSSBQ8NFR3 76 aa3.09□□□□□ -1.91
PABPC1-213ENST00000519848 MT1LQ93083 61 aa3.09□□□□□ -1.91
PABPC1-213ENST00000519848 SPANXA2-OT1Q8N9U9 137 aa3.08□□□□□ -1.92
PABPC1-213ENST00000519848 MT4P47944 62 aa3.07□□□□□ -1.92
PABPC1-213ENST00000519848 COA5Q86WW8 74 aa3.07□□□□□ -1.92
PABPC1-213ENST00000519848 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
PABPC1-213ENST00000519848 PSPHP1O15172 72 aa3.06□□□□□ -1.92
PABPC1-213ENST00000519848 SMIM20Q8N5G0 67 aa3.06□□□□□ -1.92
PABPC1-213ENST00000519848 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
PABPC1-213ENST00000519848 MT1GP13640 62 aa3.05□□□□□ -1.92
PABPC1-213ENST00000519848 PMAIP1Q13794 54 aa3.03□□□□□ -1.92
PABPC1-213ENST00000519848 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
PABPC1-213ENST00000519848 SMIM26A0A096LP01 95 aa3.01□□□□□ -1.93
PABPC1-213ENST00000519848 SERP2Q8N6R1 65 aa3.01□□□□□ -1.93
PABPC1-213ENST00000519848 A8MU10 97 aa3□□□□□ -1.93
PABPC1-213ENST00000519848 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
PABPC1-213ENST00000519848 SPINT4Q6UDR6 99 aa3□□□□□ -1.93
PABPC1-213ENST00000519848 C10orf95Q9H7T3 257 aa3□□□□□ -1.93
PABPC1-213ENST00000519848 K7ERU9 68 aa2.98□□□□□ -1.93
PABPC1-213ENST00000519848 ANAPC13Q9BS18 74 aa2.97□□□□□ -1.93
PABPC1-213ENST00000519848 A0A1B0GU33 70 aa2.95□□□□□ -1.94
PABPC1-213ENST00000519848 H7BZZ5 65 aa2.95□□□□□ -1.94
PABPC1-213ENST00000519848 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
PABPC1-213ENST00000519848 RPS28P62857 69 aaKnown RBP2.93□□□□□ -1.94
PABPC1-213ENST00000519848 COX7CP15954 63 aa2.89□□□□□ -1.95
PABPC1-213ENST00000519848 SERP1Q9Y6X1 66 aa2.89□□□□□ -1.95
PABPC1-213ENST00000519848 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
PABPC1-213ENST00000519848 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
PABPC1-213ENST00000519848 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
PABPC1-213ENST00000519848 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
PABPC1-213ENST00000519848 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
PABPC1-213ENST00000519848 KRTAP12-3P60328 96 aa2.83□□□□□ -1.96
PABPC1-213ENST00000519848 A0A1B0GU69 56 aa2.82□□□□□ -1.96
PABPC1-213ENST00000519848 TNP1P09430 55 aa2.82□□□□□ -1.96
PABPC1-213ENST00000519848 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
PABPC1-213ENST00000519848 K7ERS5 55 aa2.78□□□□□ -1.96
PABPC1-213ENST00000519848 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
PABPC1-213ENST00000519848 KTN1-AS1Q86SY8 53 aa2.77□□□□□ -1.97
PABPC1-213ENST00000519848 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
PABPC1-213ENST00000519848 CCDC179H3BU77 68 aa2.76□□□□□ -1.97
PABPC1-213ENST00000519848 SYNE1Q8NF91 8797 aaKnown RBP2.73□□□□□ -1.97
PABPC1-213ENST00000519848 LINC01558Q9Y6Z2 57 aa2.7□□□□□ -1.98
PABPC1-213ENST00000519848 A6NED7 52 aa2.67□□□□□ -1.98
PABPC1-213ENST00000519848 KRTAP12-4P60329 112 aa2.66□□□□□ -1.98
PABPC1-213ENST00000519848 BRK1Q8WUW1 75 aa2.66□□□□□ -1.98
PABPC1-213ENST00000519848 KRTAP6-1Q3LI64 71 aa2.65□□□□□ -1.99
PABPC1-213ENST00000519848 MT1AP04731 61 aa2.6□□□□□ -1.99
PABPC1-213ENST00000519848 KRTAP25-1Q3LHN0 102 aa2.6□□□□□ -1.99
PABPC1-213ENST00000519848 PRR15LQ9BU68 103 aa2.59□□□□□ -1.99
PABPC1-213ENST00000519848 TMEM258P61165 79 aa2.58□□□□□ -2
PABPC1-213ENST00000519848 UQCR11O14957 56 aa2.57□□□□□ -2
PABPC1-213ENST00000519848 ATP5EP56381 51 aaPredicted RBP2.57□□□□□ -2
PABPC1-213ENST00000519848 MIR22HGQ0VDD5 57 aa2.54□□□□□ -2
PABPC1-213ENST00000519848 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
PABPC1-213ENST00000519848 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
PABPC1-213ENST00000519848 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
PABPC1-213ENST00000519848 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
PABPC1-213ENST00000519848 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
PABPC1-213ENST00000519848 ROMO1P60602 79 aa2.44□□□□□ -2.02
PABPC1-213ENST00000519848 Q1T7F1 81 aa2.39□□□□□ -2.03
PABPC1-213ENST00000519848 CDC42SE1Q9NRR8 79 aa2.31□□□□□ -2.04
PABPC1-213ENST00000519848 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
PABPC1-213ENST00000519848 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
PABPC1-213ENST00000519848 INE1O15225 51 aa2.07□□□□□ -2.08
PABPC1-213ENST00000519848 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
PABPC1-213ENST00000519848 PRM1P04553 51 aa1.24□□□□□ -2.21
PABPC1-213ENST00000519848 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
PABPC1-213ENST00000519848 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms