RNA–Protein interactions for RNA: ENST00000516882.1

SCARNA18.2-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 84 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.2-201ENST00000516882 MT1LQ93083 61 aa2.53□□□□□ -2
SCARNA18.2-201ENST00000516882 DSTQ03001 7570 aaKnown RBP2.51□□□□□ -2.01
SCARNA18.2-201ENST00000516882 KRTAP25-1Q3LHN0 102 aa2.51□□□□□ -2.01
SCARNA18.2-201ENST00000516882 MT1MQ8N339 61 aa2.51□□□□□ -2.01
SCARNA18.2-201ENST00000516882 KRTAP12-3P60328 96 aa2.5□□□□□ -2.01
SCARNA18.2-201ENST00000516882 A6NED7 52 aa2.48□□□□□ -2.01
SCARNA18.2-201ENST00000516882 KRTAP4-9Q9BYQ8 210 aa2.46□□□□□ -2.02
SCARNA18.2-201ENST00000516882 LCE4AQ5TA78 99 aa2.44□□□□□ -2.02
SCARNA18.2-201ENST00000516882 KRTAP23-1A1A580 65 aa2.42□□□□□ -2.02
SCARNA18.2-201ENST00000516882 RPS28P62857 69 aaKnown RBP2.42□□□□□ -2.02
SCARNA18.2-201ENST00000516882 KRTAP4-3Q9BYR4 195 aa2.42□□□□□ -2.02
SCARNA18.2-201ENST00000516882 CDC42SE1Q9NRR8 79 aa2.42□□□□□ -2.02
SCARNA18.2-201ENST00000516882 MT4P47944 62 aa2.41□□□□□ -2.02
SCARNA18.2-201ENST00000516882 LCE1DQ5T752 114 aa2.41□□□□□ -2.02
SCARNA18.2-201ENST00000516882 PCP4P48539 62 aa2.4□□□□□ -2.03
SCARNA18.2-201ENST00000516882 KRTAP19-4Q3LI73 84 aa2.39□□□□□ -2.03
SCARNA18.2-201ENST00000516882 KRTAP4-7Q9BYR0 210 aa2.38□□□□□ -2.03
SCARNA18.2-201ENST00000516882 ROMO1P60602 79 aa2.36□□□□□ -2.03
SCARNA18.2-201ENST00000516882 KRTAP5-4Q6L8H1 288 aa2.36□□□□□ -2.03
SCARNA18.2-201ENST00000516882 KRTAP15-1Q3LI76 137 aa2.35□□□□□ -2.03
SCARNA18.2-201ENST00000516882 KRTAP4-6Q9BYQ5 205 aa2.31□□□□□ -2.04
SCARNA18.2-201ENST00000516882 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
SCARNA18.2-201ENST00000516882 LCE3CQ5T5A8 94 aa2.29□□□□□ -2.04
SCARNA18.2-201ENST00000516882 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
SCARNA18.2-201ENST00000516882 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
SCARNA18.2-201ENST00000516882 LOC100996750A0A140TA64 210 aa2.26□□□□□ -2.05
SCARNA18.2-201ENST00000516882 SPRR5A0A1B0GTR4 108 aa2.25□□□□□ -2.05
SCARNA18.2-201ENST00000516882 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
SCARNA18.2-201ENST00000516882 KRTAP5-10Q6L8G5 202 aa2.21□□□□□ -2.06
SCARNA18.2-201ENST00000516882 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
SCARNA18.2-201ENST00000516882 KRTAP5-3Q6L8H2 238 aa2.18□□□□□ -2.06
SCARNA18.2-201ENST00000516882 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
SCARNA18.2-201ENST00000516882 MT1AP04731 61 aa2.16□□□□□ -2.06
SCARNA18.2-201ENST00000516882 BRK1Q8WUW1 75 aa2.16□□□□□ -2.06
SCARNA18.2-201ENST00000516882 KRTAP6-1Q3LI64 71 aa2.13□□□□□ -2.07
SCARNA18.2-201ENST00000516882 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
SCARNA18.2-201ENST00000516882 KRTAP9-6A8MVA2 160 aa2.1□□□□□ -2.07
SCARNA18.2-201ENST00000516882 KRTAP9-4Q9BYQ2 154 aa2.09□□□□□ -2.07
SCARNA18.2-201ENST00000516882 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.08
SCARNA18.2-201ENST00000516882 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
SCARNA18.2-201ENST00000516882 KRTAP4-11Q9BYQ6 195 aa2.05□□□□□ -2.08
SCARNA18.2-201ENST00000516882 PMAIP1Q13794 54 aa2.04□□□□□ -2.08
SCARNA18.2-201ENST00000516882 KRTAP6-2Q3LI66 62 aa2.04□□□□□ -2.08
SCARNA18.2-201ENST00000516882 MT3P25713 68 aa2□□□□□ -2.09
SCARNA18.2-201ENST00000516882 KRTAP5-8O75690 187 aa1.96□□□□□ -2.1
SCARNA18.2-201ENST00000516882 PRAC1Q96KF2 57 aa1.91□□□□□ -2.1
SCARNA18.2-201ENST00000516882 KRTAP9-9Q9BYP9 154 aa1.91□□□□□ -2.1
SCARNA18.2-201ENST00000516882 OBSCNQ5VST9 7968 aa1.9□□□□□ -2.11
SCARNA18.2-201ENST00000516882 PRO0628Q9UI54 55 aa1.87□□□□□ -2.11
SCARNA18.2-201ENST00000516882 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
SCARNA18.2-201ENST00000516882 LCE1EQ5T753 118 aa1.81□□□□□ -2.12
SCARNA18.2-201ENST00000516882 KTN1-AS1Q86SY8 53 aa1.8□□□□□ -2.12
SCARNA18.2-201ENST00000516882 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
SCARNA18.2-201ENST00000516882 SVIPQ8NHG7 77 aa1.77□□□□□ -2.13
SCARNA18.2-201ENST00000516882 MUC5ACP98088 5654 aa1.76□□□□□ -2.13
SCARNA18.2-201ENST00000516882 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
SCARNA18.2-201ENST00000516882 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
SCARNA18.2-201ENST00000516882 LUZP6Q538Z0 58 aa1.71□□□□□ -2.14
SCARNA18.2-201ENST00000516882 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
SCARNA18.2-201ENST00000516882 LCE3DQ9BYE3 92 aa1.68□□□□□ -2.14
SCARNA18.2-201ENST00000516882 KRTAP4-2Q9BYR5 136 aa1.68□□□□□ -2.14
SCARNA18.2-201ENST00000516882 LCE3EQ5T5B0 92 aa1.58□□□□□ -2.16
SCARNA18.2-201ENST00000516882 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.52□□□□□ -2.17
SCARNA18.2-201ENST00000516882 KRTAP4-12Q9BQ66 201 aa1.52□□□□□ -2.17
SCARNA18.2-201ENST00000516882 KRTAP5-11Q6L8G4 156 aa1.51□□□□□ -2.17
SCARNA18.2-201ENST00000516882 LCE1FQ5T754 118 aa1.49□□□□□ -2.17
SCARNA18.2-201ENST00000516882 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
SCARNA18.2-201ENST00000516882 NDUFAF8A1L188 74 aa1.32□□□□□ -2.2
SCARNA18.2-201ENST00000516882 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
SCARNA18.2-201ENST00000516882 KRTAP4-4Q9BYR3 166 aa1.28□□□□□ -2.2
SCARNA18.2-201ENST00000516882 PRM1P04553 51 aa1.2□□□□□ -2.22
SCARNA18.2-201ENST00000516882 MUC19Q7Z5P9 8384 aa1.15□□□□□ -2.23
SCARNA18.2-201ENST00000516882 A0A0A0MQY5 61 aa1.1□□□□□ -2.23
SCARNA18.2-201ENST00000516882 INE1O15225 51 aa1.09□□□□□ -2.23
SCARNA18.2-201ENST00000516882 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
SCARNA18.2-201ENST00000516882 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
SCARNA18.2-201ENST00000516882 H3BS24 57 aa0.52□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 220.7 ms