RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 LCE5AQ5TCM9 118 aa3.49□□□□□ -1.85
SCARNA16-201ENST00000515981 KRTAP12-3P60328 96 aa3.48□□□□□ -1.85
SCARNA16-201ENST00000515981 MT1LQ93083 61 aa3.47□□□□□ -1.85
SCARNA16-201ENST00000515981 BRK1Q8WUW1 75 aa3.45□□□□□ -1.86
SCARNA16-201ENST00000515981 MT1GP13640 62 aa3.44□□□□□ -1.86
SCARNA16-201ENST00000515981 LCE3BQ5TA77 95 aa3.43□□□□□ -1.86
SCARNA16-201ENST00000515981 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
SCARNA16-201ENST00000515981 MT1MQ8N339 61 aa3.42□□□□□ -1.86
SCARNA16-201ENST00000515981 KRTAP23-1A1A580 65 aa3.4□□□□□ -1.87
SCARNA16-201ENST00000515981 KRTAP2-2Q9BYT5 123 aa3.4□□□□□ -1.87
SCARNA16-201ENST00000515981 KRTAP2-1Q9BYU5 128 aa3.4□□□□□ -1.87
SCARNA16-201ENST00000515981 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
SCARNA16-201ENST00000515981 KRTAP4-7Q9BYR0 210 aa3.38□□□□□ -1.87
SCARNA16-201ENST00000515981 PP632Q6XCG6 107 aa3.37□□□□□ -1.87
SCARNA16-201ENST00000515981 KRTAP15-1Q3LI76 137 aa3.31□□□□□ -1.88
SCARNA16-201ENST00000515981 PMAIP1Q13794 54 aa3.25□□□□□ -1.89
SCARNA16-201ENST00000515981 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
SCARNA16-201ENST00000515981 KRTAP19-4Q3LI73 84 aa3.19□□□□□ -1.9
SCARNA16-201ENST00000515981 KRTAP4-9Q9BYQ8 210 aa3.19□□□□□ -1.9
SCARNA16-201ENST00000515981 LOC100996750A0A140TA64 210 aa3.18□□□□□ -1.9
SCARNA16-201ENST00000515981 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
SCARNA16-201ENST00000515981 PRO0628Q9UI54 55 aa3.16□□□□□ -1.9
SCARNA16-201ENST00000515981 PRAC1Q96KF2 57 aa3.15□□□□□ -1.91
SCARNA16-201ENST00000515981 MT4P47944 62 aa3.11□□□□□ -1.91
SCARNA16-201ENST00000515981 LCE4AQ5TA78 99 aa3.11□□□□□ -1.91
SCARNA16-201ENST00000515981 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
SCARNA16-201ENST00000515981 LCE1DQ5T752 114 aa3.1□□□□□ -1.91
SCARNA16-201ENST00000515981 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
SCARNA16-201ENST00000515981 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
SCARNA16-201ENST00000515981 KRTAP4-6Q9BYQ5 205 aa3.06□□□□□ -1.92
SCARNA16-201ENST00000515981 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
SCARNA16-201ENST00000515981 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
SCARNA16-201ENST00000515981 AHNAK2Q8IVF2 5795 aa3.04□□□□□ -1.92
SCARNA16-201ENST00000515981 KTN1-AS1Q86SY8 53 aa2.97□□□□□ -1.93
SCARNA16-201ENST00000515981 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
SCARNA16-201ENST00000515981 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
SCARNA16-201ENST00000515981 MT1AP04731 61 aa2.94□□□□□ -1.94
SCARNA16-201ENST00000515981 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
SCARNA16-201ENST00000515981 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
SCARNA16-201ENST00000515981 SVIPQ8NHG7 77 aa2.85□□□□□ -1.95
SCARNA16-201ENST00000515981 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.95
SCARNA16-201ENST00000515981 KRTAP9-4Q9BYQ2 154 aa2.84□□□□□ -1.95
SCARNA16-201ENST00000515981 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
SCARNA16-201ENST00000515981 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
SCARNA16-201ENST00000515981 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
SCARNA16-201ENST00000515981 MT3P25713 68 aa2.68□□□□□ -1.98
SCARNA16-201ENST00000515981 KRTAP4-11Q9BYQ6 195 aa2.63□□□□□ -1.99
SCARNA16-201ENST00000515981 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
SCARNA16-201ENST00000515981 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
SCARNA16-201ENST00000515981 MUC5ACP98088 5654 aa2.56□□□□□ -2
SCARNA16-201ENST00000515981 KRTAP5-8O75690 187 aa2.54□□□□□ -2
SCARNA16-201ENST00000515981 LUZP6Q538Z0 58 aa2.53□□□□□ -2
SCARNA16-201ENST00000515981 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
SCARNA16-201ENST00000515981 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
SCARNA16-201ENST00000515981 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
SCARNA16-201ENST00000515981 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
SCARNA16-201ENST00000515981 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
SCARNA16-201ENST00000515981 KRTAP9-9Q9BYP9 154 aa2.35□□□□□ -2.03
SCARNA16-201ENST00000515981 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
SCARNA16-201ENST00000515981 NDUFAF8A1L188 74 aa2.28□□□□□ -2.04
SCARNA16-201ENST00000515981 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.04
SCARNA16-201ENST00000515981 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
SCARNA16-201ENST00000515981 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
SCARNA16-201ENST00000515981 KRTAP4-12Q9BQ66 201 aa2.04□□□□□ -2.08
SCARNA16-201ENST00000515981 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
SCARNA16-201ENST00000515981 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
SCARNA16-201ENST00000515981 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
SCARNA16-201ENST00000515981 LCE1FQ5T754 118 aa1.86□□□□□ -2.11
SCARNA16-201ENST00000515981 A0A0A0MQY5 61 aa1.84□□□□□ -2.11
SCARNA16-201ENST00000515981 PRM1P04553 51 aa1.83□□□□□ -2.12
SCARNA16-201ENST00000515981 INE1O15225 51 aa1.8□□□□□ -2.12
SCARNA16-201ENST00000515981 KRTAP4-4Q9BYR3 166 aa1.8□□□□□ -2.12
SCARNA16-201ENST00000515981 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
SCARNA16-201ENST00000515981 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
SCARNA16-201ENST00000515981 H3BS24 57 aa1.36□□□□□ -2.19
SCARNA16-201ENST00000515981 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
SCARNA16-201ENST00000515981 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms