RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 M0QZ58 72 aa1.51□□□□□ -2.17
HTT-210ENST00000512909 MT1BP07438 61 aa1.51□□□□□ -2.17
HTT-210ENST00000512909 PMAIP1Q13794 54 aa1.51□□□□□ -2.17
HTT-210ENST00000512909 C20orf197Q8N268 126 aa1.51□□□□□ -2.17
HTT-210ENST00000512909 SMIM20Q8N5G0 67 aa1.51□□□□□ -2.17
HTT-210ENST00000512909 SPRR2GQ9BYE4 73 aa1.51□□□□□ -2.17
HTT-210ENST00000512909 SNURFQ9Y675 71 aa1.51□□□□□ -2.17
HTT-210ENST00000512909 KRTAP19-8Q3LI54 63 aa1.5□□□□□ -2.17
HTT-210ENST00000512909 H0YAA0 97 aa1.49□□□□□ -2.17
HTT-210ENST00000512909 USH2AO75445 5202 aa1.49□□□□□ -2.17
HTT-210ENST00000512909 DMAC1Q96GE9 116 aa1.48□□□□□ -2.17
HTT-210ENST00000512909 FCGBPQ9Y6R7 5405 aaPredicted RBP1.48□□□□□ -2.17
HTT-210ENST00000512909 CYSTM1Q9H1C7 97 aa1.47□□□□□ -2.17
HTT-210ENST00000512909 Q1T7F1 81 aa1.46□□□□□ -2.18
HTT-210ENST00000512909 SERP2Q8N6R1 65 aa1.45□□□□□ -2.18
HTT-210ENST00000512909 SERP1Q9Y6X1 66 aa1.45□□□□□ -2.18
HTT-210ENST00000512909 SSPOA2VEC9 5147 aa1.44□□□□□ -2.18
HTT-210ENST00000512909 A0A0D9SG42 100 aa1.43□□□□□ -2.18
HTT-210ENST00000512909 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
HTT-210ENST00000512909 SYNE2Q8WXH0 6885 aaKnown RBP1.42□□□□□ -2.18
HTT-210ENST00000512909 MACF1Q9UPN3 7388 aaKnown RBP1.42□□□□□ -2.18
HTT-210ENST00000512909 KRTAP8-1Q8IUC2 63 aa1.42□□□□□ -2.18
HTT-210ENST00000512909 SPRR2FQ96RM1 72 aa1.42□□□□□ -2.18
HTT-210ENST00000512909 COX7CP15954 63 aa1.41□□□□□ -2.18
HTT-210ENST00000512909 SPRR2EP22531 72 aa1.41□□□□□ -2.18
HTT-210ENST00000512909 SPRR2BP35325 72 aa1.41□□□□□ -2.18
HTT-210ENST00000512909 SPRR2AP35326 72 aa1.41□□□□□ -2.18
HTT-210ENST00000512909 MT1XP80297 61 aa1.41□□□□□ -2.18
HTT-210ENST00000512909 KRTAP20-1Q3LI63 56 aa1.41□□□□□ -2.18
HTT-210ENST00000512909 SPATA8Q6RVD6 105 aa1.4□□□□□ -2.19
HTT-210ENST00000512909 A0A1B0GU69 56 aa1.38□□□□□ -2.19
HTT-210ENST00000512909 HMCN1Q96RW7 5635 aa1.38□□□□□ -2.19
HTT-210ENST00000512909 KRTAP2-3P0C7H8 128 aa1.37□□□□□ -2.19
HTT-210ENST00000512909 KRTAP2-4Q9BYR9 128 aa1.37□□□□□ -2.19
HTT-210ENST00000512909 SPRR2DP22532 72 aa1.36□□□□□ -2.19
HTT-210ENST00000512909 CCDC179H3BU77 68 aa1.35□□□□□ -2.19
HTT-210ENST00000512909 H7BZZ5 65 aa1.35□□□□□ -2.19
HTT-210ENST00000512909 PRR15LQ9BU68 103 aa1.35□□□□□ -2.19
HTT-210ENST00000512909 KRTAP2-1Q9BYU5 128 aa1.33□□□□□ -2.2
HTT-210ENST00000512909 NEBP20929 6669 aa1.31□□□□□ -2.2
HTT-210ENST00000512909 TNP1P09430 55 aa1.3□□□□□ -2.2
HTT-210ENST00000512909 ATP5EP56381 51 aaPredicted RBP1.3□□□□□ -2.2
HTT-210ENST00000512909 UQCR11O14957 56 aa1.28□□□□□ -2.2
HTT-210ENST00000512909 KRTAP19-5Q3LI72 72 aa1.28□□□□□ -2.2
HTT-210ENST00000512909 LINC01558Q9Y6Z2 57 aa1.28□□□□□ -2.2
HTT-210ENST00000512909 MIR22HGQ0VDD5 57 aa1.27□□□□□ -2.21
HTT-210ENST00000512909 C10orf95Q9H7T3 257 aa1.26□□□□□ -2.21
HTT-210ENST00000512909 KMT2DO14686 5537 aa1.25□□□□□ -2.21
HTT-210ENST00000512909 MT1EP04732 61 aa1.25□□□□□ -2.21
HTT-210ENST00000512909 KRTAP19-7Q3SYF9 63 aa1.25□□□□□ -2.21
HTT-210ENST00000512909 KRTAP19-3Q7Z4W3 81 aa1.25□□□□□ -2.21
HTT-210ENST00000512909 MT1GP13640 62 aa1.24□□□□□ -2.21
HTT-210ENST00000512909 MDN1Q9NU22 5596 aa1.23□□□□□ -2.21
HTT-210ENST00000512909 MUC12Q9UKN1 5478 aa1.22□□□□□ -2.21
HTT-210ENST00000512909 CDC42SE1Q9NRR8 79 aa1.22□□□□□ -2.21
HTT-210ENST00000512909 MT4P47944 62 aa1.21□□□□□ -2.22
HTT-210ENST00000512909 MT1MQ8N339 61 aa1.2□□□□□ -2.22
HTT-210ENST00000512909 MT1LQ93083 61 aa1.2□□□□□ -2.22
HTT-210ENST00000512909 RPS28P62857 69 aaKnown RBP1.17□□□□□ -2.22
HTT-210ENST00000512909 INE1O15225 51 aa1.15□□□□□ -2.23
HTT-210ENST00000512909 ROMO1P60602 79 aa1.15□□□□□ -2.23
HTT-210ENST00000512909 DSTQ03001 7570 aaKnown RBP1.15□□□□□ -2.23
HTT-210ENST00000512909 KRTAP20-2Q3LI61 65 aa1.07□□□□□ -2.24
HTT-210ENST00000512909 BRK1Q8WUW1 75 aa1.07□□□□□ -2.24
HTT-210ENST00000512909 MT1AP04731 61 aa1.03□□□□□ -2.24
HTT-210ENST00000512909 KRTAP6-1Q3LI64 71 aa1.03□□□□□ -2.24
HTT-210ENST00000512909 KRTAP5-10Q6L8G5 202 aa1.03□□□□□ -2.24
HTT-210ENST00000512909 GPR98Q8WXG9 6306 aa1.02□□□□□ -2.25
HTT-210ENST00000512909 KRTAP6-2Q3LI66 62 aa1□□□□□ -2.25
HTT-210ENST00000512909 AHNAK2Q8IVF2 5795 aa0.99□□□□□ -2.25
HTT-210ENST00000512909 SYNE1Q8NF91 8797 aaKnown RBP0.94□□□□□ -2.26
HTT-210ENST00000512909 MUC5ACP98088 5654 aa0.82□□□□□ -2.28
HTT-210ENST00000512909 AHNAKQ09666 5890 aaKnown RBP0.81□□□□□ -2.28
HTT-210ENST00000512909 MUC5BQ9HC84 5762 aaPredicted RBP0.79□□□□□ -2.28
HTT-210ENST00000512909 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
HTT-210ENST00000512909 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
HTT-210ENST00000512909 PRM1P04553 51 aa0.59□□□□□ -2.31
HTT-210ENST00000512909 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 162.5 ms