RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 KRTAP12-3P60328 96 aa2.59□□□□□ -1.99
CLCN3-208ENST00000512813 J3QR89 54 aa2.58□□□□□ -2
CLCN3-208ENST00000512813 KRTAP13-4Q3LI77 160 aa2.58□□□□□ -2
CLCN3-208ENST00000512813 FAM240AA0A1B0GVK7 77 aa2.57□□□□□ -2
CLCN3-208ENST00000512813 ATOX1O00244 68 aa2.53□□□□□ -2
CLCN3-208ENST00000512813 LINC00643Q86TS7 51 aa2.52□□□□□ -2.01
CLCN3-208ENST00000512813 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
CLCN3-208ENST00000512813 H0Y9P7 68 aa2.51□□□□□ -2.01
CLCN3-208ENST00000512813 SCGB1A1P11684 91 aa2.51□□□□□ -2.01
CLCN3-208ENST00000512813 PCP4P48539 62 aa2.5□□□□□ -2.01
CLCN3-208ENST00000512813 HIST1H4AP62805 103 aaKnown RBP2.48□□□□□ -2.01
CLCN3-208ENST00000512813 DMAC1Q96GE9 116 aa2.47□□□□□ -2.01
CLCN3-208ENST00000512813 UBL5Q9BZL1 73 aa2.47□□□□□ -2.01
CLCN3-208ENST00000512813 ATP5EP2Q5VTU8 51 aa2.45□□□□□ -2.02
CLCN3-208ENST00000512813 UQCRQO14949 82 aa2.44□□□□□ -2.02
CLCN3-208ENST00000512813 TNP1P09430 55 aa2.43□□□□□ -2.02
CLCN3-208ENST00000512813 CCDC179H3BU77 68 aa2.42□□□□□ -2.02
CLCN3-208ENST00000512813 ANAPC13Q9BS18 74 aa2.42□□□□□ -2.02
CLCN3-208ENST00000512813 SVIPQ8NHG7 77 aa2.41□□□□□ -2.02
CLCN3-208ENST00000512813 LINC00208Q96KT6 92 aa2.41□□□□□ -2.02
CLCN3-208ENST00000512813 COX7CP15954 63 aa2.39□□□□□ -2.03
CLCN3-208ENST00000512813 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
CLCN3-208ENST00000512813 SERP2Q8N6R1 65 aa2.39□□□□□ -2.03
CLCN3-208ENST00000512813 OCR1Q9BZK8 76 aa2.39□□□□□ -2.03
CLCN3-208ENST00000512813 TRAV7A0A075B6U4 112 aa2.38□□□□□ -2.03
CLCN3-208ENST00000512813 SPINT4Q6UDR6 99 aa2.38□□□□□ -2.03
CLCN3-208ENST00000512813 SPTSSBQ8NFR3 76 aa2.36□□□□□ -2.03
CLCN3-208ENST00000512813 SMIM20Q8N5G0 67 aa2.35□□□□□ -2.03
CLCN3-208ENST00000512813 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
CLCN3-208ENST00000512813 LCE1FQ5T754 118 aa2.34□□□□□ -2.03
CLCN3-208ENST00000512813 KRTAP12-1P59990 96 aa2.33□□□□□ -2.04
CLCN3-208ENST00000512813 H7BZZ5 65 aa2.32□□□□□ -2.04
CLCN3-208ENST00000512813 KRTAP25-1Q3LHN0 102 aa2.32□□□□□ -2.04
CLCN3-208ENST00000512813 SNURFQ9Y675 71 aa2.32□□□□□ -2.04
CLCN3-208ENST00000512813 LCE3CQ5T5A8 94 aa2.3□□□□□ -2.04
CLCN3-208ENST00000512813 TMEM258P61165 79 aa2.28□□□□□ -2.04
CLCN3-208ENST00000512813 H3BPC8 53 aa2.26□□□□□ -2.05
CLCN3-208ENST00000512813 MP68P56378 58 aa2.25□□□□□ -2.05
CLCN3-208ENST00000512813 RPS28P62857 69 aaKnown RBP2.25□□□□□ -2.05
CLCN3-208ENST00000512813 SPANXA2-OT1Q8N9U9 137 aa2.23□□□□□ -2.05
CLCN3-208ENST00000512813 ATP5EP56381 51 aaPredicted RBP2.22□□□□□ -2.05
CLCN3-208ENST00000512813 SERP1Q9Y6X1 66 aa2.22□□□□□ -2.05
CLCN3-208ENST00000512813 ACYP2P14621 99 aa2.21□□□□□ -2.06
CLCN3-208ENST00000512813 SPATA8Q6RVD6 105 aa2.2□□□□□ -2.06
CLCN3-208ENST00000512813 SMIM26A0A096LP01 95 aa2.16□□□□□ -2.06
CLCN3-208ENST00000512813 CHKB-CPT1BH3BT56 60 aa2.16□□□□□ -2.06
CLCN3-208ENST00000512813 COA5Q86WW8 74 aa2.16□□□□□ -2.06
CLCN3-208ENST00000512813 Q1T7F1 81 aa2.13□□□□□ -2.07
CLCN3-208ENST00000512813 LINC01558Q9Y6Z2 57 aa2.1□□□□□ -2.07
CLCN3-208ENST00000512813 PSPHP1O15172 72 aa2.08□□□□□ -2.08
CLCN3-208ENST00000512813 V9GYY9 64 aa2.07□□□□□ -2.08
CLCN3-208ENST00000512813 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
CLCN3-208ENST00000512813 PRR15LQ9BU68 103 aa2.06□□□□□ -2.08
CLCN3-208ENST00000512813 A8MU10 97 aa2.04□□□□□ -2.08
CLCN3-208ENST00000512813 A0A1B0GU33 70 aa2.02□□□□□ -2.09
CLCN3-208ENST00000512813 A0A1B0GU69 56 aa2.01□□□□□ -2.09
CLCN3-208ENST00000512813 BRK1Q8WUW1 75 aa1.99□□□□□ -2.09
CLCN3-208ENST00000512813 PRO0628Q9UI54 55 aa1.99□□□□□ -2.09
CLCN3-208ENST00000512813 A6NED7 52 aa1.98□□□□□ -2.09
CLCN3-208ENST00000512813 CDC42SE1Q9NRR8 79 aa1.98□□□□□ -2.09
CLCN3-208ENST00000512813 UQCR11O14957 56 aa1.96□□□□□ -2.1
CLCN3-208ENST00000512813 SEC61GP60059 68 aa1.96□□□□□ -2.1
CLCN3-208ENST00000512813 MIR22HGQ0VDD5 57 aa1.95□□□□□ -2.1
CLCN3-208ENST00000512813 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
CLCN3-208ENST00000512813 A0A0A0MQY5 61 aa1.92□□□□□ -2.1
CLCN3-208ENST00000512813 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
CLCN3-208ENST00000512813 PMAIP1Q13794 54 aa1.88□□□□□ -2.11
CLCN3-208ENST00000512813 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
CLCN3-208ENST00000512813 KTN1-AS1Q86SY8 53 aa1.82□□□□□ -2.12
CLCN3-208ENST00000512813 NDUFAF8A1L188 74 aa1.81□□□□□ -2.12
CLCN3-208ENST00000512813 PRAC1Q96KF2 57 aa1.81□□□□□ -2.12
CLCN3-208ENST00000512813 K7ERS5 55 aa1.78□□□□□ -2.12
CLCN3-208ENST00000512813 ROMO1P60602 79 aa1.78□□□□□ -2.12
CLCN3-208ENST00000512813 LCE3DQ9BYE3 92 aa1.55□□□□□ -2.16
CLCN3-208ENST00000512813 LUZP6Q538Z0 58 aa1.37□□□□□ -2.19
CLCN3-208ENST00000512813 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
CLCN3-208ENST00000512813 INE1O15225 51 aa1.15□□□□□ -2.23
CLCN3-208ENST00000512813 PRM1P04553 51 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 249.6 ms