RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 R4GN34 69 aa2.52□□□□□ -2.01
RNF4-217ENST00000511892 A0A0D9SG42 100 aa2.49□□□□□ -2.01
RNF4-217ENST00000511892 KRTAP5-9P26371 169 aa2.49□□□□□ -2.01
RNF4-217ENST00000511892 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
RNF4-217ENST00000511892 KRTAP12-1P59990 96 aa2.47□□□□□ -2.01
RNF4-217ENST00000511892 ROMO1P60602 79 aa2.46□□□□□ -2.02
RNF4-217ENST00000511892 MT1XP80297 61 aa2.45□□□□□ -2.02
RNF4-217ENST00000511892 SPINT4Q6UDR6 99 aa2.45□□□□□ -2.02
RNF4-217ENST00000511892 KRTAP12-2P59991 146 aa2.44□□□□□ -2.02
RNF4-217ENST00000511892 KRTAP9-6A8MVA2 160 aa2.42□□□□□ -2.02
RNF4-217ENST00000511892 MT3P25713 68 aa2.42□□□□□ -2.02
RNF4-217ENST00000511892 KRTAP20-1Q3LI63 56 aa2.42□□□□□ -2.02
RNF4-217ENST00000511892 LINC01554Q52M75 96 aa2.42□□□□□ -2.02
RNF4-217ENST00000511892 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
RNF4-217ENST00000511892 PRO2289Q9P1D8 64 aa2.41□□□□□ -2.02
RNF4-217ENST00000511892 PRAC1Q96KF2 57 aa2.39□□□□□ -2.03
RNF4-217ENST00000511892 SPRR2FQ96RM1 72 aa2.39□□□□□ -2.03
RNF4-217ENST00000511892 KRTAP25-1Q3LHN0 102 aa2.38□□□□□ -2.03
RNF4-217ENST00000511892 KRTAP2-3P0C7H8 128 aa2.36□□□□□ -2.03
RNF4-217ENST00000511892 SPRR2EP22531 72 aa2.36□□□□□ -2.03
RNF4-217ENST00000511892 SPRR2BP35325 72 aa2.36□□□□□ -2.03
RNF4-217ENST00000511892 SPRR2AP35326 72 aa2.36□□□□□ -2.03
RNF4-217ENST00000511892 CAMK2N1Q7Z7J9 78 aa2.36□□□□□ -2.03
RNF4-217ENST00000511892 KRTAP8-1Q8IUC2 63 aa2.36□□□□□ -2.03
RNF4-217ENST00000511892 KRTAP2-4Q9BYR9 128 aa2.36□□□□□ -2.03
RNF4-217ENST00000511892 KRTAP10-12P60413 245 aa2.33□□□□□ -2.04
RNF4-217ENST00000511892 C10orf95Q9H7T3 257 aa2.32□□□□□ -2.04
RNF4-217ENST00000511892 PP632Q6XCG6 107 aa2.3□□□□□ -2.04
RNF4-217ENST00000511892 DSTQ03001 7570 aaKnown RBP2.29□□□□□ -2.04
RNF4-217ENST00000511892 TNP1P09430 55 aa2.29□□□□□ -2.04
RNF4-217ENST00000511892 SPRR2DP22532 72 aa2.28□□□□□ -2.04
RNF4-217ENST00000511892 KRTAP2-1Q9BYU5 128 aa2.28□□□□□ -2.04
RNF4-217ENST00000511892 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
RNF4-217ENST00000511892 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
RNF4-217ENST00000511892 KRTAP4-3Q9BYR4 195 aa2.21□□□□□ -2.06
RNF4-217ENST00000511892 KRTAP19-7Q3SYF9 63 aa2.2□□□□□ -2.06
RNF4-217ENST00000511892 LCE3CQ5T5A8 94 aa2.19□□□□□ -2.06
RNF4-217ENST00000511892 MT1EP04732 61 aa2.18□□□□□ -2.06
RNF4-217ENST00000511892 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
RNF4-217ENST00000511892 KRTAP19-3Q7Z4W3 81 aa2.15□□□□□ -2.07
RNF4-217ENST00000511892 KRTAP19-5Q3LI72 72 aa2.13□□□□□ -2.07
RNF4-217ENST00000511892 LCE3AQ5TA76 89 aa2.12□□□□□ -2.07
RNF4-217ENST00000511892 MT1GP13640 62 aa2.1□□□□□ -2.07
RNF4-217ENST00000511892 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.07
RNF4-217ENST00000511892 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
RNF4-217ENST00000511892 MT1MQ8N339 61 aa2.07□□□□□ -2.08
RNF4-217ENST00000511892 MT1LQ93083 61 aa2.07□□□□□ -2.08
RNF4-217ENST00000511892 KRTAP12-3P60328 96 aa2.06□□□□□ -2.08
RNF4-217ENST00000511892 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
RNF4-217ENST00000511892 SPRR5A0A1B0GTR4 108 aa2.03□□□□□ -2.08
RNF4-217ENST00000511892 SYNE1Q8NF91 8797 aaKnown RBP2.01□□□□□ -2.09
RNF4-217ENST00000511892 MT4P47944 62 aa2.01□□□□□ -2.09
RNF4-217ENST00000511892 LUZP6Q538Z0 58 aa2.01□□□□□ -2.09
RNF4-217ENST00000511892 LCE3EQ5T5B0 92 aa2□□□□□ -2.09
RNF4-217ENST00000511892 NDUFAF8A1L188 74 aa1.96□□□□□ -2.1
RNF4-217ENST00000511892 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
RNF4-217ENST00000511892 KRTAP5-5Q701N2 237 aaPredicted RBP1.91□□□□□ -2.1
RNF4-217ENST00000511892 KRTAP20-2Q3LI61 65 aa1.88□□□□□ -2.11
RNF4-217ENST00000511892 A0A0A0MQY5 61 aa1.86□□□□□ -2.11
RNF4-217ENST00000511892 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.11
RNF4-217ENST00000511892 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
RNF4-217ENST00000511892 MT1AP04731 61 aa1.76□□□□□ -2.13
RNF4-217ENST00000511892 KRTAP6-1Q3LI64 71 aa1.76□□□□□ -2.13
RNF4-217ENST00000511892 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
RNF4-217ENST00000511892 LCE1BQ5T7P3 118 aa1.76□□□□□ -2.13
RNF4-217ENST00000511892 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
RNF4-217ENST00000511892 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
RNF4-217ENST00000511892 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
RNF4-217ENST00000511892 INE1O15225 51 aa1.69□□□□□ -2.14
RNF4-217ENST00000511892 KRTAP6-2Q3LI66 62 aa1.68□□□□□ -2.14
RNF4-217ENST00000511892 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
RNF4-217ENST00000511892 LCE3DQ9BYE3 92 aa1.52□□□□□ -2.17
RNF4-217ENST00000511892 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
RNF4-217ENST00000511892 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
RNF4-217ENST00000511892 PRM1P04553 51 aa1.25□□□□□ -2.21
RNF4-217ENST00000511892 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
RNF4-217ENST00000511892 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
RNF4-217ENST00000511892 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms