RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 VCANP13611 3396 aa0.48□□□□□ -2.33
HMGB3P3-201ENST00000510526 FRAS1Q86XX4 4008 aa0.48□□□□□ -2.33
HMGB3P3-201ENST00000510526 DNAH17Q9UFH2 4485 aa0.47□□□□□ -2.33
HMGB3P3-201ENST00000510526 FAT3Q8TDW7 4589 aa0.47□□□□□ -2.33
HMGB3P3-201ENST00000510526 CENPFP49454 3210 aa0.47□□□□□ -2.33
HMGB3P3-201ENST00000510526 MT1XP80297 61 aa0.47□□□□□ -2.33
HMGB3P3-201ENST00000510526 EYSQ5T1H1 3165 aa0.47□□□□□ -2.33
HMGB3P3-201ENST00000510526 DNAH7Q8WXX0 4024 aa0.47□□□□□ -2.33
HMGB3P3-201ENST00000510526 PKHD1L1Q86WI1 4243 aa0.47□□□□□ -2.33
HMGB3P3-201ENST00000510526 LPAP08519 4548 aa0.46□□□□□ -2.34
HMGB3P3-201ENST00000510526 PKD1P98161 4303 aa0.46□□□□□ -2.34
HMGB3P3-201ENST00000510526 DNAH6Q9C0G6 4158 aa0.46□□□□□ -2.34
HMGB3P3-201ENST00000510526 PLECQ15149 4684 aaKnown RBP0.46□□□□□ -2.34
HMGB3P3-201ENST00000510526 TRRAPQ9Y4A5 3859 aa0.46□□□□□ -2.34
HMGB3P3-201ENST00000510526 MYO15AQ9UKN7 3530 aa0.46□□□□□ -2.34
HMGB3P3-201ENST00000510526 MUC5BQ9HC84 5762 aaPredicted RBP0.45□□□□□ -2.34
HMGB3P3-201ENST00000510526 SYNE1Q8NF91 8797 aaKnown RBP0.45□□□□□ -2.34
HMGB3P3-201ENST00000510526 HECTD4Q9Y4D8 3996 aa0.44□□□□□ -2.34
HMGB3P3-201ENST00000510526 BRCA2P51587 3418 aa0.44□□□□□ -2.34
HMGB3P3-201ENST00000510526 AHNAKQ09666 5890 aaKnown RBP0.43□□□□□ -2.34
HMGB3P3-201ENST00000510526 LRP1Q07954 4544 aaKnown RBP0.43□□□□□ -2.34
HMGB3P3-201ENST00000510526 HERC1Q15751 4861 aa0.43□□□□□ -2.34
HMGB3P3-201ENST00000510526 VPS13CQ709C8 3753 aa0.43□□□□□ -2.34
HMGB3P3-201ENST00000510526 DYNC1H1Q14204 4646 aaKnown RBP0.43□□□□□ -2.34
HMGB3P3-201ENST00000510526 DNAH14Q0VDD8 3507 aa0.43□□□□□ -2.34
HMGB3P3-201ENST00000510526 MT2AP02795 61 aa0.42□□□□□ -2.34
HMGB3P3-201ENST00000510526 MT1GP13640 62 aa0.42□□□□□ -2.34
HMGB3P3-201ENST00000510526 STARD9Q9P2P6 4700 aa0.41□□□□□ -2.34
HMGB3P3-201ENST00000510526 CDH23Q9H251 3354 aa0.41□□□□□ -2.34
HMGB3P3-201ENST00000510526 MT1HL1P0DM35 61 aa0.41□□□□□ -2.34
HMGB3P3-201ENST00000510526 MT1MQ8N339 61 aa0.41□□□□□ -2.34
HMGB3P3-201ENST00000510526 DNAH5Q8TE73 4624 aa0.41□□□□□ -2.34
HMGB3P3-201ENST00000510526 WDFY3Q8IZQ1 3526 aa0.4□□□□□ -2.35
HMGB3P3-201ENST00000510526 KRTAP19-7Q3SYF9 63 aa0.4□□□□□ -2.35
HMGB3P3-201ENST00000510526 GPR98Q8WXG9 6306 aa0.39□□□□□ -2.35
HMGB3P3-201ENST00000510526 PKHD1P08F94 4074 aa0.39□□□□□ -2.35
HMGB3P3-201ENST00000510526 MUC17Q685J3 4493 aa0.39□□□□□ -2.35
HMGB3P3-201ENST00000510526 FAT1Q14517 4588 aa0.39□□□□□ -2.35
HMGB3P3-201ENST00000510526 MT1BP07438 61 aa0.38□□□□□ -2.35
HMGB3P3-201ENST00000510526 KRTAP19-2Q3LHN2 52 aa0.37□□□□□ -2.35
HMGB3P3-201ENST00000510526 MT1FP04733 61 aa0.36□□□□□ -2.35
HMGB3P3-201ENST00000510526 LRP1BQ9NZR2 4599 aa0.36□□□□□ -2.35
HMGB3P3-201ENST00000510526 LRP2P98164 4655 aa0.33□□□□□ -2.36
HMGB3P3-201ENST00000510526 KRTAP6-1Q3LI64 71 aa0.33□□□□□ -2.36
HMGB3P3-201ENST00000510526 MUC5ACP98088 5654 aa0.32□□□□□ -2.36
HMGB3P3-201ENST00000510526 FAT4Q6V0I7 4981 aa0.32□□□□□ -2.36
HMGB3P3-201ENST00000510526 MDN1Q9NU22 5596 aa0.3□□□□□ -2.36
HMGB3P3-201ENST00000510526 HMCN2Q8NDA2 5059 aa0.29□□□□□ -2.36
HMGB3P3-201ENST00000510526 KMT2CQ8NEZ4 4911 aaKnown RBP0.29□□□□□ -2.36
HMGB3P3-201ENST00000510526 KMT2DO14686 5537 aa0.29□□□□□ -2.36
HMGB3P3-201ENST00000510526 USH2AO75445 5202 aa0.27□□□□□ -2.37
HMGB3P3-201ENST00000510526 MUC12Q9UKN1 5478 aa0.27□□□□□ -2.37
HMGB3P3-201ENST00000510526 PCLOQ9Y6V0 5065 aa0.26□□□□□ -2.37
HMGB3P3-201ENST00000510526 HERC2O95714 4834 aa0.26□□□□□ -2.37
HMGB3P3-201ENST00000510526 SYNE2Q8WXH0 6885 aaKnown RBP0.26□□□□□ -2.37
HMGB3P3-201ENST00000510526 DNHD1Q96M86 4753 aa0.26□□□□□ -2.37
HMGB3P3-201ENST00000510526 FSIP2Q5CZC0 6907 aa0.25□□□□□ -2.37
HMGB3P3-201ENST00000510526 UBR4Q5T4S7 5183 aa0.24□□□□□ -2.37
HMGB3P3-201ENST00000510526 MUC2Q02817 5179 aa0.24□□□□□ -2.37
HMGB3P3-201ENST00000510526 RYR1P21817 5038 aa0.23□□□□□ -2.37
HMGB3P3-201ENST00000510526 RYR3Q15413 4870 aa0.23□□□□□ -2.37
HMGB3P3-201ENST00000510526 SSPOA2VEC9 5147 aa0.22□□□□□ -2.37
HMGB3P3-201ENST00000510526 PHGR1C9JFL3 82 aa0.21□□□□□ -2.38
HMGB3P3-201ENST00000510526 HYDINQ4G0P3 5121 aa0.21□□□□□ -2.38
HMGB3P3-201ENST00000510526 BIRC6Q9NR09 4857 aa0.2□□□□□ -2.38
HMGB3P3-201ENST00000510526 MACF1Q9UPN3 7388 aaKnown RBP0.19□□□□□ -2.38
HMGB3P3-201ENST00000510526 RNF213Q63HN8 5207 aa0.18□□□□□ -2.38
HMGB3P3-201ENST00000510526 EPPK1P58107 5090 aaKnown RBP0.18□□□□□ -2.38
HMGB3P3-201ENST00000510526 MT4P47944 62 aa0.17□□□□□ -2.38
HMGB3P3-201ENST00000510526 KRTAP19-6Q3LI70 58 aa0.14□□□□□ -2.39
HMGB3P3-201ENST00000510526 KIAA1109Q2LD37 5005 aa0.12□□□□□ -2.39
HMGB3P3-201ENST00000510526 RYR2Q92736 4967 aa0.11□□□□□ -2.39
HMGB3P3-201ENST00000510526 KRTAP20-2Q3LI61 65 aa0.11□□□□□ -2.39
HMGB3P3-201ENST00000510526 DSTQ03001 7570 aaKnown RBP0.09□□□□□ -2.39
HMGB3P3-201ENST00000510526 ABCA13Q86UQ4 5058 aa0.09□□□□□ -2.4
HMGB3P3-201ENST00000510526 KRTAP20-1Q3LI63 56 aa0.06□□□□□ -2.4
HMGB3P3-201ENST00000510526 NEBP20929 6669 aa0.01□□□□□ -2.41
Retrieved 77 of 20,778 RNA–protein pairs in 117 ms