RNA–Protein interactions for RNA: ENST00000510500.5

CAST-232, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-232ENST00000510500 KRTAP6-3Q3LI67 103 aa3□□□□□ -1.93
CAST-232ENST00000510500 MUC17Q685J3 4493 aa2.98□□□□□ -1.93
CAST-232ENST00000510500 LCE3CQ5T5A8 94 aa2.96□□□□□ -1.94
CAST-232ENST00000510500 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
CAST-232ENST00000510500 C9orf92A6NGG3 77 aa2.93□□□□□ -1.94
CAST-232ENST00000510500 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
CAST-232ENST00000510500 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
CAST-232ENST00000510500 KRTAP10-12P60413 245 aa2.88□□□□□ -1.95
CAST-232ENST00000510500 SYNE2Q8WXH0 6885 aaKnown RBP2.87□□□□□ -1.95
CAST-232ENST00000510500 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
CAST-232ENST00000510500 KRTAP4-3Q9BYR4 195 aa2.86□□□□□ -1.95
CAST-232ENST00000510500 MACF1Q9UPN3 7388 aaKnown RBP2.85□□□□□ -1.95
CAST-232ENST00000510500 USH2AO75445 5202 aa2.82□□□□□ -1.96
CAST-232ENST00000510500 FCGBPQ9Y6R7 5405 aaPredicted RBP2.82□□□□□ -1.96
CAST-232ENST00000510500 KRTAP2-3P0C7H8 128 aa2.82□□□□□ -1.96
CAST-232ENST00000510500 KRTAP2-4Q9BYR9 128 aa2.82□□□□□ -1.96
CAST-232ENST00000510500 KRTAP2-1Q9BYU5 128 aa2.82□□□□□ -1.96
CAST-232ENST00000510500 HMCN1Q96RW7 5635 aa2.78□□□□□ -1.96
CAST-232ENST00000510500 MT1HP80294 61 aa2.78□□□□□ -1.96
CAST-232ENST00000510500 NEBP20929 6669 aa2.77□□□□□ -1.97
CAST-232ENST00000510500 KRTAP20-1Q3LI63 56 aa2.77□□□□□ -1.97
CAST-232ENST00000510500 KRTAP8-1Q8IUC2 63 aa2.77□□□□□ -1.97
CAST-232ENST00000510500 KRTAP4-1Q9BYQ7 146 aa2.74□□□□□ -1.97
CAST-232ENST00000510500 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
CAST-232ENST00000510500 M0R2T5 61 aa2.72□□□□□ -1.97
CAST-232ENST00000510500 KRTAP19-2Q3LHN2 52 aa2.7□□□□□ -1.98
CAST-232ENST00000510500 KRTAP9-6A8MVA2 160 aa2.69□□□□□ -1.98
CAST-232ENST00000510500 FLGP20930 4061 aaPredicted RBP2.69□□□□□ -1.98
CAST-232ENST00000510500 KRTAP10-5P60370 271 aa2.66□□□□□ -1.98
CAST-232ENST00000510500 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
CAST-232ENST00000510500 MUC12Q9UKN1 5478 aa2.61□□□□□ -1.99
CAST-232ENST00000510500 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
CAST-232ENST00000510500 KRTAP19-6Q3LI70 58 aa2.58□□□□□ -2
CAST-232ENST00000510500 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
CAST-232ENST00000510500 KRTAP12-3P60328 96 aa2.55□□□□□ -2
CAST-232ENST00000510500 KRTAP5-8O75690 187 aa2.54□□□□□ -2
CAST-232ENST00000510500 KMT2DO14686 5537 aa2.51□□□□□ -2.01
CAST-232ENST00000510500 MT2AP02795 61 aa2.49□□□□□ -2.01
CAST-232ENST00000510500 MDN1Q9NU22 5596 aa2.47□□□□□ -2.01
CAST-232ENST00000510500 MT1FP04733 61 aa2.46□□□□□ -2.02
CAST-232ENST00000510500 PRM1P04553 51 aa2.37□□□□□ -2.03
CAST-232ENST00000510500 KRTAP19-5Q3LI72 72 aa2.36□□□□□ -2.03
CAST-232ENST00000510500 SPRR2EP22531 72 aa2.33□□□□□ -2.04
CAST-232ENST00000510500 SPRR2BP35325 72 aa2.33□□□□□ -2.04
CAST-232ENST00000510500 SPRR2AP35326 72 aa2.33□□□□□ -2.04
CAST-232ENST00000510500 SPRR2DP22532 72 aa2.26□□□□□ -2.05
CAST-232ENST00000510500 SPRR2FQ96RM1 72 aa2.25□□□□□ -2.05
CAST-232ENST00000510500 SPRR2GQ9BYE4 73 aa2.24□□□□□ -2.05
CAST-232ENST00000510500 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
CAST-232ENST00000510500 DSTQ03001 7570 aaKnown RBP2.2□□□□□ -2.06
CAST-232ENST00000510500 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
CAST-232ENST00000510500 MT1AP04731 61 aa2.18□□□□□ -2.06
CAST-232ENST00000510500 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
CAST-232ENST00000510500 MT1BP07438 61 aa2.14□□□□□ -2.07
CAST-232ENST00000510500 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
CAST-232ENST00000510500 KRTAP19-8Q3LI54 63 aa2.1□□□□□ -2.07
CAST-232ENST00000510500 MT1XP80297 61 aa2.08□□□□□ -2.08
CAST-232ENST00000510500 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
CAST-232ENST00000510500 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
CAST-232ENST00000510500 SYNE1Q8NF91 8797 aaKnown RBP2.02□□□□□ -2.09
CAST-232ENST00000510500 MT4P47944 62 aa2.01□□□□□ -2.09
CAST-232ENST00000510500 KRTAP6-2Q3LI66 62 aa2.01□□□□□ -2.09
CAST-232ENST00000510500 MT1EP04732 61 aa2□□□□□ -2.09
CAST-232ENST00000510500 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
CAST-232ENST00000510500 MT1LQ93083 61 aa1.94□□□□□ -2.1
CAST-232ENST00000510500 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
CAST-232ENST00000510500 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
CAST-232ENST00000510500 KRTAP19-3Q7Z4W3 81 aa1.88□□□□□ -2.11
CAST-232ENST00000510500 KRTAP19-7Q3SYF9 63 aa1.84□□□□□ -2.12
CAST-232ENST00000510500 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
CAST-232ENST00000510500 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
CAST-232ENST00000510500 MT1GP13640 62 aa1.73□□□□□ -2.13
CAST-232ENST00000510500 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
CAST-232ENST00000510500 MT1MQ8N339 61 aa1.68□□□□□ -2.14
CAST-232ENST00000510500 KRTAP6-1Q3LI64 71 aa1.54□□□□□ -2.16
CAST-232ENST00000510500 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
CAST-232ENST00000510500 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
CAST-232ENST00000510500 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 167.8 ms