RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 PLAC4Q8WY50 150 aa4.28□□□□□ -1.72
PFDN1-203ENST00000510217 C10orf95Q9H7T3 257 aa4.28□□□□□ -1.72
PFDN1-203ENST00000510217 MDN1Q9NU22 5596 aa4.27□□□□□ -1.73
PFDN1-203ENST00000510217 KRTAP20-1Q3LI63 56 aa4.26□□□□□ -1.73
PFDN1-203ENST00000510217 KRTAP4-11Q9BYQ6 195 aa4.25□□□□□ -1.73
PFDN1-203ENST00000510217 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
PFDN1-203ENST00000510217 KRTAP8-1Q8IUC2 63 aa4.2□□□□□ -1.74
PFDN1-203ENST00000510217 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
PFDN1-203ENST00000510217 SPRR2EP22531 72 aa4.18□□□□□ -1.74
PFDN1-203ENST00000510217 SPRR2BP35325 72 aa4.18□□□□□ -1.74
PFDN1-203ENST00000510217 SPRR2AP35326 72 aa4.18□□□□□ -1.74
PFDN1-203ENST00000510217 CAMK2N1Q7Z7J9 78 aa4.17□□□□□ -1.74
PFDN1-203ENST00000510217 PP632Q6XCG6 107 aa4.15□□□□□ -1.75
PFDN1-203ENST00000510217 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
PFDN1-203ENST00000510217 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
PFDN1-203ENST00000510217 KRTAP2-3P0C7H8 128 aa4.13□□□□□ -1.75
PFDN1-203ENST00000510217 KRTAP2-4Q9BYR9 128 aa4.13□□□□□ -1.75
PFDN1-203ENST00000510217 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
PFDN1-203ENST00000510217 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
PFDN1-203ENST00000510217 TNP1P09430 55 aa4.04□□□□□ -1.76
PFDN1-203ENST00000510217 SPRR2DP22532 72 aa4.04□□□□□ -1.76
PFDN1-203ENST00000510217 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
PFDN1-203ENST00000510217 KRTAP2-1Q9BYU5 128 aa3.99□□□□□ -1.77
PFDN1-203ENST00000510217 MT3P25713 68 aa3.95□□□□□ -1.78
PFDN1-203ENST00000510217 KRTAP19-7Q3SYF9 63 aa3.88□□□□□ -1.79
PFDN1-203ENST00000510217 MT1EP04732 61 aa3.85□□□□□ -1.79
PFDN1-203ENST00000510217 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
PFDN1-203ENST00000510217 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
PFDN1-203ENST00000510217 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
PFDN1-203ENST00000510217 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
PFDN1-203ENST00000510217 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
PFDN1-203ENST00000510217 KRTAP19-5Q3LI72 72 aa3.76□□□□□ -1.81
PFDN1-203ENST00000510217 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
PFDN1-203ENST00000510217 MT1GP13640 62 aa3.69□□□□□ -1.82
PFDN1-203ENST00000510217 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
PFDN1-203ENST00000510217 MT1LQ93083 61 aa3.67□□□□□ -1.82
PFDN1-203ENST00000510217 MT1MQ8N339 61 aa3.66□□□□□ -1.82
PFDN1-203ENST00000510217 KRTAP12-3P60328 96 aa3.63□□□□□ -1.83
PFDN1-203ENST00000510217 KRTAP4-3Q9BYR4 195 aa3.58□□□□□ -1.84
PFDN1-203ENST00000510217 GPR98Q8WXG9 6306 aa3.56□□□□□ -1.84
PFDN1-203ENST00000510217 MT4P47944 62 aa3.53□□□□□ -1.84
PFDN1-203ENST00000510217 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
PFDN1-203ENST00000510217 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
PFDN1-203ENST00000510217 LCE3CQ5T5A8 94 aa3.42□□□□□ -1.86
PFDN1-203ENST00000510217 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
PFDN1-203ENST00000510217 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
PFDN1-203ENST00000510217 KRTAP5-10Q6L8G5 202 aa3.36□□□□□ -1.87
PFDN1-203ENST00000510217 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
PFDN1-203ENST00000510217 INE1O15225 51 aa3.31□□□□□ -1.88
PFDN1-203ENST00000510217 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
PFDN1-203ENST00000510217 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
PFDN1-203ENST00000510217 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
PFDN1-203ENST00000510217 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
PFDN1-203ENST00000510217 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
PFDN1-203ENST00000510217 MT1AP04731 61 aa3.11□□□□□ -1.91
PFDN1-203ENST00000510217 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
PFDN1-203ENST00000510217 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
PFDN1-203ENST00000510217 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
PFDN1-203ENST00000510217 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.94
PFDN1-203ENST00000510217 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
PFDN1-203ENST00000510217 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
PFDN1-203ENST00000510217 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
PFDN1-203ENST00000510217 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
PFDN1-203ENST00000510217 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
PFDN1-203ENST00000510217 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
PFDN1-203ENST00000510217 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
PFDN1-203ENST00000510217 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
PFDN1-203ENST00000510217 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
PFDN1-203ENST00000510217 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
PFDN1-203ENST00000510217 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
PFDN1-203ENST00000510217 PRM1P04553 51 aa2.39□□□□□ -2.03
PFDN1-203ENST00000510217 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
PFDN1-203ENST00000510217 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
PFDN1-203ENST00000510217 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
PFDN1-203ENST00000510217 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
PFDN1-203ENST00000510217 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
PFDN1-203ENST00000510217 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms