RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 KRTAP5-5Q701N2 237 aaPredicted RBP4.48□□□□□ -1.69
DDX41-210ENST00000509576 A0A1B0GU33 70 aa4.45□□□□□ -1.7
DDX41-210ENST00000509576 SERP2Q8N6R1 65 aa4.45□□□□□ -1.7
DDX41-210ENST00000509576 A8MU10 97 aa4.42□□□□□ -1.7
DDX41-210ENST00000509576 COX7CP15954 63 aa4.42□□□□□ -1.7
DDX41-210ENST00000509576 PCP4P48539 62 aa4.4□□□□□ -1.71
DDX41-210ENST00000509576 ANAPC13Q9BS18 74 aa4.4□□□□□ -1.71
DDX41-210ENST00000509576 SERP1Q9Y6X1 66 aa4.4□□□□□ -1.71
DDX41-210ENST00000509576 CCDC179H3BU77 68 aa4.36□□□□□ -1.71
DDX41-210ENST00000509576 SEC61GP60059 68 aa4.36□□□□□ -1.71
DDX41-210ENST00000509576 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
DDX41-210ENST00000509576 TNP1P09430 55 aa4.34□□□□□ -1.71
DDX41-210ENST00000509576 KRTAP12-3P60328 96 aa4.34□□□□□ -1.71
DDX41-210ENST00000509576 H7BZZ5 65 aa4.31□□□□□ -1.72
DDX41-210ENST00000509576 SMIM26A0A096LP01 95 aa4.26□□□□□ -1.73
DDX41-210ENST00000509576 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
DDX41-210ENST00000509576 TMEM258P61165 79 aa4.2□□□□□ -1.74
DDX41-210ENST00000509576 A0A1B0GU69 56 aa4.19□□□□□ -1.74
DDX41-210ENST00000509576 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
DDX41-210ENST00000509576 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
DDX41-210ENST00000509576 ATP5EP56381 51 aaPredicted RBP4.16□□□□□ -1.74
DDX41-210ENST00000509576 KRTAP5-2Q701N4 177 aa4.15□□□□□ -1.75
DDX41-210ENST00000509576 KRTAP5-8O75690 187 aa4.09□□□□□ -1.75
DDX41-210ENST00000509576 RPS28P62857 69 aaKnown RBP4.07□□□□□ -1.76
DDX41-210ENST00000509576 KRTAP6-1Q3LI64 71 aa4.07□□□□□ -1.76
DDX41-210ENST00000509576 AHNAKQ09666 5890 aaKnown RBP4.04□□□□□ -1.76
DDX41-210ENST00000509576 MT1AP04731 61 aa4.01□□□□□ -1.77
DDX41-210ENST00000509576 MUC5ACP98088 5654 aa4□□□□□ -1.77
DDX41-210ENST00000509576 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
DDX41-210ENST00000509576 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
DDX41-210ENST00000509576 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
DDX41-210ENST00000509576 MUC5BQ9HC84 5762 aaPredicted RBP3.98□□□□□ -1.77
DDX41-210ENST00000509576 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
DDX41-210ENST00000509576 KRTAP25-1Q3LHN0 102 aa3.95□□□□□ -1.78
DDX41-210ENST00000509576 KRTAP15-1Q3LI76 137 aa3.93□□□□□ -1.78
DDX41-210ENST00000509576 LINC01558Q9Y6Z2 57 aa3.93□□□□□ -1.78
DDX41-210ENST00000509576 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
DDX41-210ENST00000509576 Q1T7F1 81 aa3.92□□□□□ -1.78
DDX41-210ENST00000509576 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
DDX41-210ENST00000509576 KRTAP6-2Q3LI66 62 aa3.91□□□□□ -1.78
DDX41-210ENST00000509576 PRR15LQ9BU68 103 aa3.88□□□□□ -1.79
DDX41-210ENST00000509576 H3BS24 57 aa3.87□□□□□ -1.79
DDX41-210ENST00000509576 V9GYY9 64 aa3.85□□□□□ -1.79
DDX41-210ENST00000509576 UQCR11O14957 56 aa3.81□□□□□ -1.8
DDX41-210ENST00000509576 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
DDX41-210ENST00000509576 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
DDX41-210ENST00000509576 PSPHP1O15172 72 aa3.77□□□□□ -1.81
DDX41-210ENST00000509576 MIR22HGQ0VDD5 57 aa3.73□□□□□ -1.81
DDX41-210ENST00000509576 PRO0628Q9UI54 55 aa3.65□□□□□ -1.83
DDX41-210ENST00000509576 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
DDX41-210ENST00000509576 A6NED7 52 aa3.63□□□□□ -1.83
DDX41-210ENST00000509576 CDC42SE1Q9NRR8 79 aa3.63□□□□□ -1.83
DDX41-210ENST00000509576 MT3P25713 68 aa3.61□□□□□ -1.83
DDX41-210ENST00000509576 K7ERS5 55 aa3.57□□□□□ -1.84
DDX41-210ENST00000509576 BRK1Q8WUW1 75 aa3.52□□□□□ -1.85
DDX41-210ENST00000509576 PMAIP1Q13794 54 aa3.46□□□□□ -1.86
DDX41-210ENST00000509576 ROMO1P60602 79 aa3.41□□□□□ -1.86
DDX41-210ENST00000509576 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
DDX41-210ENST00000509576 KTN1-AS1Q86SY8 53 aa3.31□□□□□ -1.88
DDX41-210ENST00000509576 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
DDX41-210ENST00000509576 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
DDX41-210ENST00000509576 PRAC1Q96KF2 57 aa3.16□□□□□ -1.9
DDX41-210ENST00000509576 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
DDX41-210ENST00000509576 A0A0A0MQY5 61 aa2.94□□□□□ -1.94
DDX41-210ENST00000509576 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
DDX41-210ENST00000509576 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
DDX41-210ENST00000509576 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
DDX41-210ENST00000509576 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
DDX41-210ENST00000509576 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
DDX41-210ENST00000509576 LUZP6Q538Z0 58 aa2.69□□□□□ -1.98
DDX41-210ENST00000509576 NDUFAF8A1L188 74 aa2.64□□□□□ -1.99
DDX41-210ENST00000509576 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
DDX41-210ENST00000509576 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
DDX41-210ENST00000509576 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
DDX41-210ENST00000509576 INE1O15225 51 aa2.3□□□□□ -2.04
DDX41-210ENST00000509576 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
DDX41-210ENST00000509576 PRM1P04553 51 aa1.78□□□□□ -2.12
DDX41-210ENST00000509576 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 72.3 ms