RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 SPINT4Q6UDR6 99 aa4.13□□□□□ -1.75
POLR2J3-213ENST00000508848 NEBP20929 6669 aa4.11□□□□□ -1.75
POLR2J3-213ENST00000508848 CDC42SE1Q9NRR8 79 aa4.11□□□□□ -1.75
POLR2J3-213ENST00000508848 MIR22HGQ0VDD5 57 aa4.09□□□□□ -1.75
POLR2J3-213ENST00000508848 PMAIP1Q13794 54 aa4.09□□□□□ -1.75
POLR2J3-213ENST00000508848 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
POLR2J3-213ENST00000508848 A8MU10 97 aa4.08□□□□□ -1.76
POLR2J3-213ENST00000508848 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
POLR2J3-213ENST00000508848 SPRR2EP22531 72 aa4.06□□□□□ -1.76
POLR2J3-213ENST00000508848 SPRR2BP35325 72 aa4.06□□□□□ -1.76
POLR2J3-213ENST00000508848 SPRR2AP35326 72 aa4.06□□□□□ -1.76
POLR2J3-213ENST00000508848 KRTAP2-3P0C7H8 128 aa4.03□□□□□ -1.76
POLR2J3-213ENST00000508848 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
POLR2J3-213ENST00000508848 KRTAP2-4Q9BYR9 128 aa4.03□□□□□ -1.76
POLR2J3-213ENST00000508848 K7ERS5 55 aa4.02□□□□□ -1.77
POLR2J3-213ENST00000508848 TNP1P09430 55 aa3.98□□□□□ -1.77
POLR2J3-213ENST00000508848 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
POLR2J3-213ENST00000508848 KTN1-AS1Q86SY8 53 aa3.98□□□□□ -1.77
POLR2J3-213ENST00000508848 C10orf95Q9H7T3 257 aa3.98□□□□□ -1.77
POLR2J3-213ENST00000508848 MT1EP04732 61 aa3.92□□□□□ -1.78
POLR2J3-213ENST00000508848 SPRR2DP22532 72 aa3.92□□□□□ -1.78
POLR2J3-213ENST00000508848 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
POLR2J3-213ENST00000508848 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
POLR2J3-213ENST00000508848 KRTAP19-3Q7Z4W3 81 aa3.89□□□□□ -1.79
POLR2J3-213ENST00000508848 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
POLR2J3-213ENST00000508848 MT1GP13640 62 aa3.86□□□□□ -1.79
POLR2J3-213ENST00000508848 KRTAP25-1Q3LHN0 102 aa3.86□□□□□ -1.79
POLR2J3-213ENST00000508848 LCE3AQ5TA76 89 aa3.84□□□□□ -1.79
POLR2J3-213ENST00000508848 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
POLR2J3-213ENST00000508848 MT1LQ93083 61 aa3.78□□□□□ -1.8
POLR2J3-213ENST00000508848 KRTAP12-3P60328 96 aa3.75□□□□□ -1.81
POLR2J3-213ENST00000508848 ROMO1P60602 79 aa3.75□□□□□ -1.81
POLR2J3-213ENST00000508848 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
POLR2J3-213ENST00000508848 MT1MQ8N339 61 aa3.72□□□□□ -1.81
POLR2J3-213ENST00000508848 KRTAP15-1Q3LI76 137 aa3.71□□□□□ -1.82
POLR2J3-213ENST00000508848 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
POLR2J3-213ENST00000508848 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
POLR2J3-213ENST00000508848 DSTQ03001 7570 aaKnown RBP3.69□□□□□ -1.82
POLR2J3-213ENST00000508848 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
POLR2J3-213ENST00000508848 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
POLR2J3-213ENST00000508848 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
POLR2J3-213ENST00000508848 GPR98Q8WXG9 6306 aa3.54□□□□□ -1.84
POLR2J3-213ENST00000508848 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
POLR2J3-213ENST00000508848 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
POLR2J3-213ENST00000508848 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
POLR2J3-213ENST00000508848 MT4P47944 62 aa3.37□□□□□ -1.87
POLR2J3-213ENST00000508848 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
POLR2J3-213ENST00000508848 KRTAP12-4P60329 112 aa3.33□□□□□ -1.88
POLR2J3-213ENST00000508848 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
POLR2J3-213ENST00000508848 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
POLR2J3-213ENST00000508848 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
POLR2J3-213ENST00000508848 MT1AP04731 61 aa3.23□□□□□ -1.89
POLR2J3-213ENST00000508848 AHNAK2Q8IVF2 5795 aa3.19□□□□□ -1.9
POLR2J3-213ENST00000508848 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
POLR2J3-213ENST00000508848 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
POLR2J3-213ENST00000508848 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
POLR2J3-213ENST00000508848 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
POLR2J3-213ENST00000508848 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
POLR2J3-213ENST00000508848 MT3P25713 68 aa3.12□□□□□ -1.91
POLR2J3-213ENST00000508848 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
POLR2J3-213ENST00000508848 KRTAP5-7Q6L8G8 165 aa3.08□□□□□ -1.92
POLR2J3-213ENST00000508848 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
POLR2J3-213ENST00000508848 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
POLR2J3-213ENST00000508848 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
POLR2J3-213ENST00000508848 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
POLR2J3-213ENST00000508848 INE1O15225 51 aa2.69□□□□□ -1.98
POLR2J3-213ENST00000508848 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
POLR2J3-213ENST00000508848 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
POLR2J3-213ENST00000508848 LCE1CQ5T751 118 aa2.55□□□□□ -2
POLR2J3-213ENST00000508848 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
POLR2J3-213ENST00000508848 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
POLR2J3-213ENST00000508848 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
POLR2J3-213ENST00000508848 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
POLR2J3-213ENST00000508848 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
POLR2J3-213ENST00000508848 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
POLR2J3-213ENST00000508848 PRM1P04553 51 aa1.91□□□□□ -2.1
POLR2J3-213ENST00000508848 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
POLR2J3-213ENST00000508848 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 269.4 ms