RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 KRTAP19-5Q3LI72 72 aa6.74□□□□□ -1.33
PDLIM7-216ENST00000506537 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
PDLIM7-216ENST00000506537 LCE3AQ5TA76 89 aa6.7□□□□□ -1.34
PDLIM7-216ENST00000506537 KRTAP19-3Q7Z4W3 81 aa6.67□□□□□ -1.34
PDLIM7-216ENST00000506537 LCE5AQ5TCM9 118 aa6.66□□□□□ -1.34
PDLIM7-216ENST00000506537 A6NED7 52 aa6.58□□□□□ -1.36
PDLIM7-216ENST00000506537 K7ERS5 55 aa6.58□□□□□ -1.36
PDLIM7-216ENST00000506537 KTN1-AS1Q86SY8 53 aa6.56□□□□□ -1.36
PDLIM7-216ENST00000506537 CDC42SE1Q9NRR8 79 aa6.54□□□□□ -1.36
PDLIM7-216ENST00000506537 MT1LQ93083 61 aa6.53□□□□□ -1.36
PDLIM7-216ENST00000506537 DSTQ03001 7570 aaKnown RBP6.52□□□□□ -1.37
PDLIM7-216ENST00000506537 MT1GP13640 62 aa6.5□□□□□ -1.37
PDLIM7-216ENST00000506537 KRTAP25-1Q3LHN0 102 aa6.49□□□□□ -1.37
PDLIM7-216ENST00000506537 MT1MQ8N339 61 aa6.45□□□□□ -1.38
PDLIM7-216ENST00000506537 KRTAP4-9Q9BYQ8 210 aa6.43□□□□□ -1.38
PDLIM7-216ENST00000506537 KRTAP12-3P60328 96 aa6.42□□□□□ -1.38
PDLIM7-216ENST00000506537 PP632Q6XCG6 107 aa6.42□□□□□ -1.38
PDLIM7-216ENST00000506537 KRTAP4-3Q9BYR4 195 aa6.31□□□□□ -1.4
PDLIM7-216ENST00000506537 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
PDLIM7-216ENST00000506537 KRTAP4-7Q9BYR0 210 aa6.24□□□□□ -1.41
PDLIM7-216ENST00000506537 ROMO1P60602 79 aa6.23□□□□□ -1.41
PDLIM7-216ENST00000506537 LCE1DQ5T752 114 aa6.21□□□□□ -1.42
PDLIM7-216ENST00000506537 HMCN1Q96RW7 5635 aa6.09□□□□□ -1.43
PDLIM7-216ENST00000506537 KRTAP5-10Q6L8G5 202 aa6.08□□□□□ -1.44
PDLIM7-216ENST00000506537 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
PDLIM7-216ENST00000506537 MT4P47944 62 aa6.06□□□□□ -1.44
PDLIM7-216ENST00000506537 AHNAK2Q8IVF2 5795 aa6.04□□□□□ -1.44
PDLIM7-216ENST00000506537 LCE4AQ5TA78 99 aa6.04□□□□□ -1.44
PDLIM7-216ENST00000506537 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
PDLIM7-216ENST00000506537 KRTAP5-4Q6L8H1 288 aa6.01□□□□□ -1.45
PDLIM7-216ENST00000506537 LCE3CQ5T5A8 94 aa5.94□□□□□ -1.46
PDLIM7-216ENST00000506537 KRTAP5-7Q6L8G8 165 aa5.94□□□□□ -1.46
PDLIM7-216ENST00000506537 KRTAP5-5Q701N2 237 aaPredicted RBP5.91□□□□□ -1.46
PDLIM7-216ENST00000506537 LOC100996750A0A140TA64 210 aa5.9□□□□□ -1.46
PDLIM7-216ENST00000506537 PRAC1Q96KF2 57 aa5.85□□□□□ -1.47
PDLIM7-216ENST00000506537 KRTAP4-6Q9BYQ5 205 aa5.84□□□□□ -1.47
PDLIM7-216ENST00000506537 KRTAP5-3Q6L8H2 238 aa5.8□□□□□ -1.48
PDLIM7-216ENST00000506537 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
PDLIM7-216ENST00000506537 H3BS24 57 aa5.68□□□□□ -1.5
PDLIM7-216ENST00000506537 KRTAP9-6A8MVA2 160 aa5.66□□□□□ -1.5
PDLIM7-216ENST00000506537 SYNE1Q8NF91 8797 aaKnown RBP5.65□□□□□ -1.5
PDLIM7-216ENST00000506537 KRTAP20-2Q3LI61 65 aa5.65□□□□□ -1.5
PDLIM7-216ENST00000506537 KRTAP12-4P60329 112 aa5.62□□□□□ -1.51
PDLIM7-216ENST00000506537 MT1AP04731 61 aa5.54□□□□□ -1.52
PDLIM7-216ENST00000506537 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
PDLIM7-216ENST00000506537 KRTAP5-2Q701N4 177 aa5.32□□□□□ -1.56
PDLIM7-216ENST00000506537 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
PDLIM7-216ENST00000506537 KRTAP6-2Q3LI66 62 aa5.21□□□□□ -1.58
PDLIM7-216ENST00000506537 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
PDLIM7-216ENST00000506537 AHNAKQ09666 5890 aaKnown RBP5.15□□□□□ -1.58
PDLIM7-216ENST00000506537 NDUFAF8A1L188 74 aa5.14□□□□□ -1.59
PDLIM7-216ENST00000506537 MUC5ACP98088 5654 aa5.12□□□□□ -1.59
PDLIM7-216ENST00000506537 LUZP6Q538Z0 58 aa5.09□□□□□ -1.59
PDLIM7-216ENST00000506537 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
PDLIM7-216ENST00000506537 MUC5BQ9HC84 5762 aaPredicted RBP5.04□□□□□ -1.6
PDLIM7-216ENST00000506537 MT3P25713 68 aa5.03□□□□□ -1.6
PDLIM7-216ENST00000506537 A0A0A0MQY5 61 aa5.01□□□□□ -1.61
PDLIM7-216ENST00000506537 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
PDLIM7-216ENST00000506537 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.63
PDLIM7-216ENST00000506537 KRTAP5-1Q6L8H4 278 aa4.73□□□□□ -1.65
PDLIM7-216ENST00000506537 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
PDLIM7-216ENST00000506537 INE1O15225 51 aa4.55□□□□□ -1.68
PDLIM7-216ENST00000506537 KRTAP4-2Q9BYR5 136 aa4.35□□□□□ -1.71
PDLIM7-216ENST00000506537 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
PDLIM7-216ENST00000506537 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
PDLIM7-216ENST00000506537 LCE1CQ5T751 118 aa4.25□□□□□ -1.73
PDLIM7-216ENST00000506537 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
PDLIM7-216ENST00000506537 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
PDLIM7-216ENST00000506537 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
PDLIM7-216ENST00000506537 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.79
PDLIM7-216ENST00000506537 KRTAP21-2Q3LI59 83 aa3.64□□□□□ -1.83
PDLIM7-216ENST00000506537 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
PDLIM7-216ENST00000506537 PHGR1C9JFL3 82 aa3.59□□□□□ -1.83
PDLIM7-216ENST00000506537 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
PDLIM7-216ENST00000506537 PRM1P04553 51 aa3.22□□□□□ -1.89
PDLIM7-216ENST00000506537 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
PDLIM7-216ENST00000506537 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
PDLIM7-216ENST00000506537 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 85.5 ms